Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq496 111 2e-19
>seq496
Length=30664
Score = 111 bits (122), Expect = 2e-19
Identities = 250/371 (67%), Gaps = 11/371 (3%)
Strand=Plus/Plus
Query 50364 GGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCAC 50423
||| | ||||| ||||| || || ||||||| | || || || ||||| || ||||||
Sbjct 5467 GGCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCAC 5526
Query 50424 ACAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACA 50483
|| |||||||| || || || | | | | | || || || ||| ||
Sbjct 5527 ACCGACTTTGCCTGCCTGCTCTTCTCT---CACATCAAGTCCAAGCCTTCGCCCGAGAC- 5582
Query 50484 ATTTTGGACATGTTCAAA---GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCT 50540
| |||| | | ||| || |||||||| || || ||||||| | || ||||||
Sbjct 5583 --TGTGGAGAGGATCATCACCGAGGCCGTCGAGATGGAGCAAGAGTTCCTTACCGACGCT 5640
Query 50541 TTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTT 50600
| ||||| || || | ||||||||||| | | |||||| ||||||| |||||||||
Sbjct 5641 CTTCCCGTCGCCCTGCTCGGCATGAACGCTACCCTCATGTGCCAGTACATCGAGTTTGTT 5700
Query 50601 GCAGACAGATTGTTGTTGCAGCTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTT 50659
|| ||| | || || || || || |||| ||| | ||| || | ||||||||
Sbjct 5701 GCCGACCGCCTGCTGGTGGCTCTTGG-CAACAAGAAGTTCTACAACTCGACCAACCCCTT 5759
Query 50660 TCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGG 50719
|| ||| | ||||| ||| | | ||||| || ||||| ||||| | ||||| ||
Sbjct 5760 CGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGCGTGTTGG 5819
Query 50720 CGAATACAAAA 50730
|| ||| |||
Sbjct 5820 TGACTACCAAA 5830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488535810781200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |