Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq546 275 6e-69 seq496 154 1e-32 seq731 122 8e-23 seq923 114 1e-20 seq670 113 4e-20 >seq546 Length=57559 Score = 275 bits (304), Expect = 6e-69 Identities = 1138/1760 (65%), Gaps = 64/1760 (4%) Strand=Plus/Plus Query 148052 CGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTT 148108 ||||||| |||||| ||||| ||||| |||||||| ||||| | ||||| |||| Sbjct 42464 CGACTGGGACTGGTCGATGAAAGCGCCGCGGTCAGCAGCCATCTGCACAATGGTGCGCTG 42523 Query 148109 TATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGAT 148168 | ||||||||| | |||||||| || |||||| | |||||||||| | || Sbjct 42524 ---CGAAATCTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCATCGGGAATGTTGGGAAT 42580 Query 148169 GCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTT 148228 ||| | ||||| | |||| || | || ||| | ||| | | | | Sbjct 42581 ATCCTGGATAGAGCCATTGCAGGCAATGATACGGTTCTTCATGTTGTCTGACCACAAGCC 42640 Query 148229 GAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCAC 148288 | ||||| ||||| | || || | | || || ||||| ||||| |||||||| || Sbjct 42641 CATCTCGACGAGGTCCTTGAGAAGCCAGGGGTTGACGACCTGGAACTCACCGGCGAGGAC 42700 Query 148289 GCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTG 148348 || ||| || | |||| || | || || || | |||||| ||| | |||||| Sbjct 42701 ACGGCGCGAGTAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGAAGCCGAGAATCTG 42760 Query 148349 CGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTT 148408 ||||| || || ||||| || || |||| ||| |||| |||| | | Sbjct 42761 GCTGGTCGAGGCAGTCGGCATAGGGGCAACGAGCAAGCTGTTCCGCACACCGTGCTGAGC 42820 Query 148409 TATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTC 148468 || | |||||| | |||||||||| || || || ||| |||||||||||| Sbjct 42821 AATCTCTGACTTCAGGCTCTCCCAGTCCCATAGATCCGTAGGGGTCTTGTTCCACATGTC 42880 Query 148469 GTACTGCAGAATGCCGCG-GCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCG 148527 |||||||| || || | | | || | | |||||||| | ||| | |||| | Sbjct 42881 GTACTGCAAGATACCTTGAGAGACAGGCGAT-CCCTCGTAAGTCTCGTAGGCACCGTTCT 42939 Query 148528 CCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCC 148587 | ||||| ||| | ||| ||| |||| || ||| || || ||| || || Sbjct 42940 TCTTGGCCAGCTCGACGGAAGCCGTGAGAGCGC-GTGGTAGATGGTTTCGAAGATCTGTA 42998 Query 148588 TGTTGAGCAGC---GCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGT 148644 ||||||| || ||| | | | | ||| | ||||| || || | || || | Sbjct 42999 TGTTGAGTTGCCTGGCCTCGGGCGAG---TCGAAAGGCATGCGAAGAGCGAGGAATGCAT 43055 Query 148645 CGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGC 148704 | |||||||| | || || || ||||||| || || |||||| | || | Sbjct 43056 CAGCAAGGCCGTTGACACCGACAGCAATGGGGCGATGGCGCATGTTGCTCTTTCTGGC-C 43114 Query 148705 TCTCGAGC-GGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTT 148762 || || | || ||||||||| |||||||||||||| |||| | | || | || | Sbjct 43115 TCGGGAACAGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTTCTTG-ACGAGGACTTG 43173 Query 148763 TGTAATTCTGCGCAGC------AATTCAAAATCGTACTTGT---CATCTACGATGCATCG 148813 || || ||||| || ||| | ||| || | |||| || | | | | Sbjct 43174 GACAACATTGTGCAGCTTCTTGAAGTCATAGACGTTGTTCTGGACATCAACAAAGG-TAG 43232 Query 148814 GTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTAC 148873 | | |||| |||||| | |||||| || || |||||| || || ||||||| || Sbjct 43233 GAAGA--GCGAGAGAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCGTGTACTCAAC 43290 Query 148874 GATCTCGGCGCACAGATTG---CTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTT 148930 |||||| ||| || ||| |||| || | ||| | |||||| || |||||||| Sbjct 43291 AATCTCGCAGCAGAGGTTGGAGCTGCGAATGGT---GCCGAGGTTCTTCTGGTTGCTCTT 43347 Query 148931 GCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCAC 148990 || |||||| || |||||||| ||||| | || ||| || || ||| | || | Sbjct 43348 GCGGTTGCAAGCATCCTTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGCCTCGAG 43407 Query 148991 TATG--AACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAG-CGACCCTCCTGCTC 149047 ||| | | | ||| | || ||||| ||| || | || || || ||| || Sbjct 43408 GATGGCATACCA--CAGCTTTTGGGCGCGGACTGTCT-CGCGACCACGGCCTTCCCTTTC 43464 Query 149048 GTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTT 149107 ||| || ||| ||||||| | |||||||| ||| | ||||| ||| || Sbjct 43465 GTACCTCTCGTAGAGCTCCTCGAACTCGTCGCCGTACACGTCGGCAAGACCCGGGGCCTC 43524 Query 149108 GTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGG 149167 ||| ||||| | ||| | ||| | |||| | ||| |||||||| ||||||||||| Sbjct 43525 GTGAGGGCAAAAGAGAGTCCATTCACCGTTTTGCTCCACACGCTTCATGAACAGATCGGG 43584 Query 149168 CACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCG 149227 | ||| | |||||| | |||||||||||| | || || || ||| ||| Sbjct 43585 AATCCACAACGCGTAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCG 43644 Query 149228 CAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCC 149287 |||| ||| | | ||| | ||| |||||||| ||||| | ||| | || | || || Sbjct 43645 AAGGTCGAGGAAGGGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACC 43704 Query 149288 CTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCAT 149344 |||||| || || |||||||||| ||| | ||||||| | ||||| | ||| Sbjct 43705 AGGACGCTTGTTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCAT 43764 Query 149345 AGGTTCAATGCCACTGGCAGTGCCGTTAGTAG-AGCTAATGCGACTGCCGCGCGCTCGCA 149403 || | ||| ||| || ||||| || ||| |||| ||| | || | Sbjct 43765 GGGAATCAGGCCGTTGGAGGTACCGTTGGTGCCAGC-AATGTAGGAGCCTGTGGAACGAA 43823 Query 149404 CTTTGTGCACGTTGACGCCGATGCCGCCG-CCGTACTTTGAGATGGCCGCGCA-GTCGCC 149461 ||| ||||||| || || || ||| |||| ||| || || || || ||| Sbjct 43824 TACGGTGGACGTTGAGACCAATTCCACCGGCCGT-CTTGGAAATCATAGCACAAGTCTT- 43881 Query 149462 GAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGA-GC 149520 ||| || ||| || |||||||||||||| ||||||| | || ||||| || || Sbjct 43882 GAGAGTGTCGTAAATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGC 43941 Query 149521 ACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATT 149580 | | || || | || || || ||||| ||||||| ||| || ||||| | | Sbjct 43942 A-AGCTGGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGTAAAGCACT 44000 Query 149581 TCTGGCTCATCATCTCGTACGACTCGA--GCACGCGGTCCATGTCATCGCCATGGATGCC 149638 | | ||||| || ||||| |||| |||| || | ||||| ||||| ||||| || Sbjct 44001 TTTCCGACATCAACTTGTACGTTTCGAGGGCACTCGTT--ATGTCTTCGCCGTGGATACC 44058 Query 149639 TATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTG-- 149696 | || || ||||| | ||| |||||||||| || || |||||| ||| | || Sbjct 44059 GACAGCAACACGCATGATCATGTGCTGCGGTCTTTCGGCAACTTTG---CCATTGATGCG 44115 Query 149697 -AGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCC 149755 |||||||| | || ||||||||| | ||||| || | ||||| ||||| ||| | Sbjct 44116 AAGCAAGTATGACCTCTCCAGTGTCTTGAAACCAAAATATTGGTAGTTGAAGTCACGGTC 44175 Query 149756 GTGGTCAATGGCGGCGTCGA 149775 || | | ||||||| || || Sbjct 44176 GTAGACGATGGCGGAGTTGA 44195 >seq496 Length=30664 Score = 154 bits (170), Expect = 1e-32 Identities = 336/501 (67%), Gaps = 9/501 (2%) Strand=Plus/Minus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||| || || || || ||||| || ||||| || ||||| | | ||||||||| | ||| Sbjct 5826 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGTTGAGCGAAATGTTCTCCAT 5767 Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCG 120473 || ||||| |||||| ||| ||| || | ||| | ||| | || ||||| || Sbjct 5766 GAAGTCGAAGGGGTTGGTCGAGTTGTAGAACTTCTTGTTGCCAAGAGCCACCAGCAGGCG 5707 Query 120474 GTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCAC 120533 ||| || |||||||| ||||||| ||||||| ||||||||||| |||| || || Sbjct 5706 GTCGGCAACAAACTCGATGTACTGGCACATGAGGGTAGCGTTCATGCCGAGCAGGGCGAC 5647 Query 120534 CGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGAG 120593 || | || || | ||||| | ||| || || || ||||| ||| || Sbjct 5646 GGGAAGAGCGTCGGTAAGGAACTCTTGCTCCATCTCGACGGCCTCGGTGATGATCCTCTC 5587 Query 120594 CATAGTGTGGCCGGGC---ATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAAA 120650 || ||| | ||||| |||| | |||| | | | || |||||| ||||| Sbjct 5586 CACAGTCT---CGGGCGAAGGCTTGGACTTGATGTGAG---AGAAGAGCAGGCAGGCAAA 5533 Query 120651 GTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCAT 120710 ||| ||||||| ||||||||| || || || ||||||||| || || ||||| ||||| Sbjct 5532 GTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCAT 5473 Query 120711 GATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTC 120770 | ||| | |||||| |||| |||| || ||| || ||||| | ||||| Sbjct 5472 CAGGCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAACCGCTGAAGAAGATACCCTC 5413 Query 120771 CACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACTT 120830 || |||||||| | || || || || |||| ||||| |||||| Sbjct 5412 GACAGCAGCAAAGGCAATCAGACGGGATGCAAAGGTCGAGTTCTTGTCACAGATCCAGCG 5353 Query 120831 CATGGCCCACTCGGCCTTTTT 120851 | |||||| ||||||||||| Sbjct 5352 GAGGGCCCAGTCGGCCTTTTT 5332 >seq731 Length=88763 Score = 122 bits (134), Expect = 8e-23 Identities = 133/174 (76%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| ||| | ||| ||| |||||| ||||||||||| Sbjct 88623 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACC-GTCCTCAAGCTGCTTGCC 88565 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| ||||||||||| |||||||| |||||| ||| Sbjct 88564 AGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTCGACTT 88505 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | ||||| | | ||| || |||| ||||| ||| |||||||| Sbjct 88504 GACGTTGTCGATGGTGTCCGAAGACTCGACTTCGAGGGTGATGGTCTTGCCGGT 88451 Score = 100 bits (110), Expect = 3e-16 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | ||| ||| |||||| ||||||||||| Sbjct 88339 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACC-GTCCTCAAGCTGCTTGCC 88281 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || || ||||| |||||||| ||||| ||| Sbjct 88280 AGCGAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTT 88221 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | | || | ||||||| || ||| || || | ||||| ||| |||||||| Sbjct 88220 CACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 88167 >seq923 Length=2568 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||| ||||| ||||| || ||||| || || ||| ||||||||| Sbjct 307 AAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTCCTGCCATCCTCGAGC 248 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || | ||||||||||| || |||||||| |||||||| ||| Sbjct 247 TGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATC 188 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | |||| ||| || | | || || |||| |||| || || ||| Sbjct 187 TTCGACTTGACGTTGTCAATCGTATCCGAAGATTCGACCTCGAGCGTGATCGTCTTTCCG 128 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || ||||| |||||||| Sbjct 127 GTCAGGGTCTTGACGAAGATCTGCAT 102 >seq670 Length=49272 Score = 113 bits (124), Expect = 4e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||| ||| | || || ||||||||||| || || ||||| ||||| Sbjct 38442 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTT 38501 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | || | ||||| | || ||| || |||| ||||| Sbjct 38502 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGAT 38561 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAA 133651 ||| ||||| ||||| || || ||||| Sbjct 38562 GGTCTTGCCCGTCAGGGTCTTGACGAA 38588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483412696658840