Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq496 104 2e-17 >seq496 Length=30664 Score = 104 bits (114), Expect = 2e-17 Identities = 165/228 (72%), Gaps = 8/228 (4%) Strand=Plus/Plus Query 47046 GAGGCGGT-GAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGG 47104 ||||| || ||| || || | ||||| |||| | || || ||||||||| |||| || Sbjct 5602 GAGGCCGTCGAG-ATGGAGCAAGAGTTCCTTACCGACGCTCTTCCCGTCGCCCTGCTCGG 5660 Query 47105 CATGAACGC-ACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGC 47163 ||||||||| || || |||||| | || || |||||||| || || || ||| ||||| Sbjct 5661 CATGAACGCTACCCTC-ATGTGCCAGTACATCGAGTTTGTTGCCGACCGCCTGCTGGTGG 5719 Query 47164 AGCTCGGACAACCGAAATATTTTAATGCTCG--TAATCCGTTTGAGTTTATGAACAACAT 47221 || || ||| | | | || || |||| || || || || || ||| | ||||| Sbjct 5720 CTCTTGG-CAA-CAAGAAGTTCTACAACTCGACCAACCCCTTCGACTTCATGGAGAACAT 5777 Query 47222 TTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 ||||||| | ||||| ||||| || |||||||| || || || || || Sbjct 5778 TTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 5825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476603210804760