Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq496 104 2e-17
>seq496
Length=30664
Score = 104 bits (114), Expect = 2e-17
Identities = 165/228 (72%), Gaps = 8/228 (4%)
Strand=Plus/Plus
Query 47046 GAGGCGGT-GAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGG 47104
||||| || ||| || || | ||||| |||| | || || ||||||||| |||| ||
Sbjct 5602 GAGGCCGTCGAG-ATGGAGCAAGAGTTCCTTACCGACGCTCTTCCCGTCGCCCTGCTCGG 5660
Query 47105 CATGAACGC-ACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGC 47163
||||||||| || || |||||| | || || |||||||| || || || ||| |||||
Sbjct 5661 CATGAACGCTACCCTC-ATGTGCCAGTACATCGAGTTTGTTGCCGACCGCCTGCTGGTGG 5719
Query 47164 AGCTCGGACAACCGAAATATTTTAATGCTCG--TAATCCGTTTGAGTTTATGAACAACAT 47221
|| || ||| | | | || || |||| || || || || || ||| | |||||
Sbjct 5720 CTCTTGG-CAA-CAAGAAGTTCTACAACTCGACCAACCCCTTCGACTTCATGGAGAACAT 5777
Query 47222 TTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269
||||||| | ||||| ||||| || |||||||| || || || || ||
Sbjct 5778 TTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 5825
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476603210804760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |