Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq731 120 3e-22
seq923 118 1e-21
seq546 116 4e-21
seq670 93.3 4e-14
seq363 87.8 2e-12
>seq731
Length=88763
Score = 120 bits (132), Expect = 3e-22
Identities = 143/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| |||||||| || ||||| ||||| || |||||||||||| || |||| ||
Sbjct 88644 AGACGCAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGA 88585
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || ||||| ||||| || || || | |||||||| || || || ||||| ||
Sbjct 88584 CCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCC 88525
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| ||||| || || ||||| ||| | ||||| || || || || ||||| ||
Sbjct 88524 TTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCGAGGGTG 88465
Query 134676 ATGGTTTTACCGGT 134689
||||| || |||||
Sbjct 88464 ATGGTCTTGCCGGT 88451
Score = 113 bits (124), Expect = 5e-20
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|||||||| ||||| || ||||| || |||||||||||| | |||| || ||| ||
Sbjct 88351 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCA 88292
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| || || || | ||||||||| || || || ||||| || || || |||
Sbjct 88291 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 88232
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || ||| | |||||||| || || || || || || ||||| ||
Sbjct 88231 ATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 88172
Query 134685 CCGGT 134689
|||||
Sbjct 88171 CCGGT 88167
>seq923
Length=2568
Score = 118 bits (130), Expect = 1e-21
Identities = 150/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
|| || || || ||||| || |||||||||| || ||||| || | || ||||||||
Sbjct 304 TGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTCCTGCCA-TCCTCGAGCTG 246
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
|||||||| || ||||| |||||||| || ||||| ||||| || || || ||||| ||
Sbjct 245 CTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTT 186
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
||||| ||| | || || || ||||| || ||||| || || || || |||||
Sbjct 185 CGACTTGACGTTGTCAATCGTATCCGAAGATTCGACCTCGAGCGTGATCGTCTTTCCGGT 126
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| || || ||||| || |||||
Sbjct 125 CAGGGTCTTGACGAAGATCTGCAT 102
>seq546
Length=57559
Score = 116 bits (128), Expect = 4e-21
Identities = 566/881 (64%), Gaps = 27/881 (3%)
Strand=Plus/Minus
Query 7537 ATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCATT 7596
||||| ||| || || ||| || || |||||| | |||| || || || || ||
Sbjct 44112 ATCAATGGCAAAGTTGCCGAAAGACCGCAGCACATGATCATGCGTGTTGCTGTCGGTATC 44053
Query 7597 CACGGCGAAGACATTGACGCC-GCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGT- 7654
|||||||||||||| ||| ||| | ||||||||| | ||||||| |||| |||
Sbjct 44052 CACGGCGAAGACATA-ACGAGTGCCCTCGAAACGTACAAGTTGATGTCG--GAAA-AGTG 43997
Query 7655 --TTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTC 7712
|||| || || || |||||| |||| ||| || || | ||| || | | ||
Sbjct 43996 CTTTACTCATGCCTCCCCCACCTTGTTCAACGCTGGTACCCCCAAGCCCCAGCTTGCATC 43937
Query 7713 GTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA 7772
|| || ||| | |||| || ||||||||||| || |||||| |||| || | ||
Sbjct 43936 ATGCTTCTTGATCGACATGAAGGAGGACAGCATCGAGGGTATTTACGACACTCT-CAAGA 43878
Query 7773 -TTGCGCCAATATTTCCAAATACGG-CGGCGGAATAGGTCTGAACGTAAACGACGTGCGC 7830
||| || | |||||| || |||| ||| ||||| ||||| ||||| || | ||
Sbjct 43877 CTTGTGCTATGATTTCC-AAGACGGCCGGTGGAATTGGTCTCAACGTCCACCGTATTCGT 43819
Query 7831 GCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTG 7890
||| || | ||| | ||||||||| | ||| ||| | |||||| |
Sbjct 43818 TCCACAGGCTCCTACATTGCTGGCACCAACGGTACCTCCAACGGCCTGATTCCCATGCTC 43759
Query 7891 CGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCC 7947
|| || | ||| ||| | | || | || ||||| || || ||||| || ||
Sbjct 43758 CGAGTCTACAACAACACTGCTCGCTACGTCGACCAAGGTGGCAACAAGCGTCCTGGTGCT 43699
Query 7948 GCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTGCGTCGC 8007
||||||||| ||||||| |||||||| ||| | | | | | || | || ||||
Sbjct 43698 TTTGCCATCTACCTGGAGCCTTGGCACGCTGACGTCTTCCCCTTCCTCGACCT---TCGC 43642
Query 8008 AA----CATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCC 8063
|| || || | || || | |||||||| || || | || |||||| | ||
Sbjct 43641 AAGAACCACGGAAAG-GAGGAGGTCCGCGCGCGCGACCTCTTTTACGCGTTGTGGATTCC 43583
Query 8064 CGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCG 8123
||||||||| |||| ||| || | ||| ||||| | ||| | ||||| | ||
Sbjct 43582 CGATCTGTTCATGAAGCGTGTGGAGCAAAACGGTGAATGGACTCTCTTTTGCCCTCA-CG 43524
Query 8124 TTGCCCTTTAT-TAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAATACG 8182
|||| | | |||| ||||| | || || | | ||| | ||||
Sbjct 43523 AGGCCCCGGGTCTTGCCGACGTGTACGGCGACGAGTTCGAGGAGCTCTACGAGAGGTACG 43464
Query 8183 AACACGACGGCGCGTACGTGCG-GCAAGTGAAAGCGCGCGACCTGCACCGCGCCATTATC 8241
|| || ||| ||| ||| | ||| || | | ||| ||||| ||
Sbjct 43463 AAAGGGAAGGC-CGTGGTCGCGAGACAGTCCGCGCCCAAAAGCTGTGGTATGCCATCCTC 43405
Query 8242 GAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAA 8301
|| ||| | ||| ||||| | || | ||||| ||||| || ||||||||| |||
Sbjct 43404 GAGGCTCAGACCGAGACCGGCAATCCCTTTATGCTCTACAAGGATGCTTGCAACCGCAAG 43345
Query 8302 AGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAG 8361
||||| || | ||| | ||||||||| | || ||| || ||| || ||||| ||
Sbjct 43344 AGCAACCAGAAGAACCTCGGCACCATTCGCAGCTCCAACCTCTGCTGCGAGATTGTTGAG 43285
Query 8362 TACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTC 8402
|||| || || || || || || ||||||||| | || ||
Sbjct 43284 TACACGGCTCCTGATGAGGTTGCTGTTTGCAATTTGGCCTC 43244
>seq670
Length=49272
Score = 93.3 bits (102), Expect = 4e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || |||||||||||| | |||| | ||| |||||||| ||||| || || |
Sbjct 38408 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 38467
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||| |||||||| || || || ||||| || || || || || || ||||| ||
Sbjct 38468 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 38527
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||| || || || || ||||| || ||||| || || || | || || ||||
Sbjct 38528 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 38587
Query 134704 A 134704
|
Sbjct 38588 A 38588
>seq363
Length=34683
Score = 87.8 bits (96), Expect = 2e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| || ||||| || || || ||||| || ||||||||||| | |||| |
Sbjct 5302 AGGCGCAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGG 5361
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| ||||| || || ||||| |||||||| ||||| || ||||| ||
Sbjct 5362 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGGGGAATGCCCTCC 5421
Query 134616 TTTTCT 134621
|| |||
Sbjct 5422 TTGTCT 5427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505389928259320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |