Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq546 197 2e-45
>seq546
Length=57559
Score = 197 bits (218), Expect = 2e-45
Identities = 566/868 (65%), Gaps = 13/868 (1%)
Strand=Plus/Plus
Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289
||||| |||| || ||||||||||||||||| |||||| | | |||||||| | |
Sbjct 43232 GGAAGAGCGAGAGAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCGTGTACTCAACA 43291
Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349
|| || || | |||||| || ||| || || | ||||| ||||| ||||| |
Sbjct 43292 ATCTCGCAGCAGAGGTTGGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGG 43351
Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409
||||| ||||||||||||||||| |||| | || ||||| ||||| | | ||| ||
Sbjct 43352 TTGCAAGCATCCTTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGCCTCGAGGATG 43411
Query 111410 GCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTT 111469
|| | ||| | | ||| | || | || | || || ||| |||||| |
Sbjct 43412 GCATACCACAGCTTTTGGGCGCGGACTGTCTCGCGACCACGGCCTTCCCTTTCGTACCTC 43471
Query 111470 GTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGA 111529
|||||| | || ||||| || || | |||||| ||||| || |||| || ||
Sbjct 43472 TCGTAGAGCTCCTCGAACTCGTCGCCGTACACGTCGGCAAGACCCGGGGCCTCGTGAGGG 43531
Query 111530 CAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589
|| || |||| ||||| ||| || ||| || ||||||||||| || || |||||||||
Sbjct 43532 CAAAAGAGAGTCCATTCACCGTTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCAC 43591
Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649
| | ||||||| || | || |||| || | || ||||| || | ||
Sbjct 43592 AACGCGTAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCG 43651
Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGA 111709
||||| | || || |||||||| ||||| || |||| || | || || ||
Sbjct 43652 AGGAAGGGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACC---AGGA 43708
Query 111710 CGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 111763
||| ||| |||| | || ||||| || ||| ||| | || || ||||| |||
Sbjct 43709 CGCTTGTTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGA 43768
Query 111764 ATAATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACAT 111821
|| | || | || ||| || || || || || ||| | ||| | | |
Sbjct 43769 ATCAGGCCGTTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCT--GTGGAACGAATAC 43826
Query 111822 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 111881
|||| || | ||||| || || ||| ||| || || ||||| | | ||||
Sbjct 43827 GGTGGACGTTGAGACCAATTCCACCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAG 43886
Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941
| | || ||||| | ||| ||||||||| || |||| | |||||| | | ||
Sbjct 43887 TGTCGTAAATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCT 43946
Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGG 112001
| || | || |||||||| ||||| | ||| || | || ||| | || || |
Sbjct 43947 GGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCG 44006
Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061
||||| | ||| || || | | || |||||||| |||||||| |||| || |
Sbjct 44007 ACATCAACTTGTACGTTTCGAGGGCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAA 44066
Query 112062 CCCGCATGAACATGTACTGTGGGGTTTC 112089
| ||||||| ||||| ||| || ||||
Sbjct 44067 CACGCATGATCATGTGCTGCGGTCTTTC 44094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628021472613600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |