Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq546 197 2e-45 >seq546 Length=57559 Score = 197 bits (218), Expect = 2e-45 Identities = 566/868 (65%), Gaps = 13/868 (1%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 ||||| |||| || ||||||||||||||||| |||||| | | |||||||| | | Sbjct 43232 GGAAGAGCGAGAGAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCGTGTACTCAACA 43291 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || | |||||| || ||| || || | ||||| ||||| ||||| | Sbjct 43292 ATCTCGCAGCAGAGGTTGGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGG 43351 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| ||||||||||||||||| |||| | || ||||| ||||| | | ||| || Sbjct 43352 TTGCAAGCATCCTTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGCCTCGAGGATG 43411 Query 111410 GCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTT 111469 || | ||| | | ||| | || | || | || || ||| |||||| | Sbjct 43412 GCATACCACAGCTTTTGGGCGCGGACTGTCTCGCGACCACGGCCTTCCCTTTCGTACCTC 43471 Query 111470 GTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGA 111529 |||||| | || ||||| || || | |||||| ||||| || |||| || || Sbjct 43472 TCGTAGAGCTCCTCGAACTCGTCGCCGTACACGTCGGCAAGACCCGGGGCCTCGTGAGGG 43531 Query 111530 CAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589 || || |||| ||||| ||| || ||| || ||||||||||| || || ||||||||| Sbjct 43532 CAAAAGAGAGTCCATTCACCGTTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCAC 43591 Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649 | | ||||||| || | || |||| || | || ||||| || | || Sbjct 43592 AACGCGTAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCG 43651 Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGA 111709 ||||| | || || |||||||| ||||| || |||| || | || || || Sbjct 43652 AGGAAGGGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACC---AGGA 43708 Query 111710 CGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 111763 ||| ||| |||| | || ||||| || ||| ||| | || || ||||| ||| Sbjct 43709 CGCTTGTTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGA 43768 Query 111764 ATAATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACAT 111821 || | || | || ||| || || || || || ||| | ||| | | | Sbjct 43769 ATCAGGCCGTTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCT--GTGGAACGAATAC 43826 Query 111822 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 111881 |||| || | ||||| || || ||| ||| || || ||||| | | |||| Sbjct 43827 GGTGGACGTTGAGACCAATTCCACCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAG 43886 Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941 | | || ||||| | ||| ||||||||| || |||| | |||||| | | || Sbjct 43887 TGTCGTAAATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCT 43946 Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGG 112001 | || | || |||||||| ||||| | ||| || | || ||| | || || | Sbjct 43947 GGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCG 44006 Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061 ||||| | ||| || || | | || |||||||| |||||||| |||| || | Sbjct 44007 ACATCAACTTGTACGTTTCGAGGGCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAA 44066 Query 112062 CCCGCATGAACATGTACTGTGGGGTTTC 112089 | ||||||| ||||| ||| || |||| Sbjct 44067 CACGCATGATCATGTGCTGCGGTCTTTC 44094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628021472613600