Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq546 145 9e-30 seq496 89.7 6e-13 >seq546 Length=57559 Score = 145 bits (160), Expect = 9e-30 Identities = 1140/1819 (63%), Gaps = 62/1819 (3%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| || |||||||| || |||||||| | | ||||| |||| Sbjct 42366 CGCAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAGCCGGCAAAGTGCATGGAGGTG 42425 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA- 117955 | |||| | || || | |||| || ||||| ||||| || |||||||| Sbjct 42426 ATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTCAGCGACTGGGACTGGTCGATGAAA 42485 Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTC 118013 ||| || || || || ||||| | | || || | | || | ||||| || ||| Sbjct 42486 GCG-CCGCGGTCAGCAGCCATCTGCA-CA-ATGGTGCGCTGCGAAATCTCCCAGACGGTC 42542 Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073 ||||||| ||| || ||||| || || | |||| ||||| || ||| || Sbjct 42543 TTGTAGAGAGCCTTGATGTCATCGGGAATGTTGGGAATATCCTGGATAGAGCCATT-GCA 42601 Query 118074 TTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 118130 | | |||| | | |||||| | | |||||| | || |||| ||| |||| Sbjct 42602 --GGCAATGATACGGTTCTTCATGTTGTCTGACCACAAGCCCATCTCGACGAGGTCCTT- 42658 Query 118131 ACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATA 118187 |||| || ||||| || |||||||| |||||| || | | ||||| Sbjct 42659 --GAGAAGCCAGGGGTTGACGACCTGGAACTCACCGGCGAGGACACGGCGCGAGTAGATG 42716 Query 118188 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG-TGGAGGCTGT 118246 |||| ||||| ||||| || || || ||| | || ||| | ||||| | ||||| || Sbjct 42717 TTGGAGGTGTAAGGCTCGAAACATTCGTTGA-AGCCGAGAATCTGGCTGGTCGAGGCAGT 42775 Query 118247 GGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAG 118306 ||||| || || | ||| | |||||| || | ||| | | ||| | ||| || Sbjct 42776 CGGCATAGGGGCAACGAGCAAGCTGTTCCGCACACCGTGCTGAGCAATCTCTGACTTCAG 42835 Query 118307 AGCGTCCCAGTCGTAGTTGAGCTTT----GTCTCCCCCTGCCACATATCAAACTGGAGGA 118362 |||||||| | | || | | |||| | |||||| || |||| | || Sbjct 42836 GCTCTCCCAGTCCCA-TAGATCCGTAGGGGTCTTG---TTCCACATGTCGTACTGCAAGA 42891 Query 118363 TACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT 118422 ||||||| || | ||||||||||| | ||||| || | || | || |||| | Sbjct 42892 TACCTTGAGAGACAGGCGATCCCTCGTAAGTCTCGTAGGCACCGTTCTTCTTGGCCAGCT 42951 Query 118423 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA-TTGCC 118481 || | ||| ||| || ||||| || || ||||| || || | || | ||||| Sbjct 42952 CGACGGAAGCCGTGAGAGC-GCGTGGTAGATGGTTTCGAAGATCTGTATGTTGAGTTGCC 43010 Query 118482 TTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGG 118541 | ||||||| || || || | | || | ||| |||| || || || | | Sbjct 43011 T-GGCCTCGGGCGAGTCGAAAGGCATGCGAAGAGCGAGGAATGCATCAGCAAGGCCGTTG 43069 Query 118542 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGA 118598 ||||||| |||| |||||||| | ||| || ||| | || ||| || || Sbjct 43070 ACACCGACAGCAATGGGGCGATGGCGCATGTTGCTCTTTCTGGC---CTCGGGAACAGGG 43126 Query 118599 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT-- 118656 || || | ||||| | | | || | || ||| || || ||| || ||| Sbjct 43127 TAGTGGTTGATGTCGATGATCTTGTTCAAGTTCTTGACGAGGAC--TTG-GACAACATTG 43183 Query 118657 -GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 118715 | ||||| | | | ||| | | ||| ||| ||| | ||||||| |||| Sbjct 43184 TGCAGCTTCTTGAAGTCATAGACGTTGTTCTGGACATCAACAAAGGTAGGAAGAGCGAGA 43243 Query 118716 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCAC 118775 || |||| ||| || |||| |||||| | | |||||||| | ||| || ||| Sbjct 43244 GAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCGTGTACTCAACAATCTCGCAGCAG 43303 Query 118776 AAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 118835 | ||| || || ||||||||| | |||||| || || ||| ||| || |||||| Sbjct 43304 AGGTTGGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 43363 Query 118836 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACA 118895 ||||| ||||| | || | || ||||| || || | || ||| || || | ||| | Sbjct 43364 TTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCACAGC 43423 Query 118896 TCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCT 118955 | || | || || || | || || || |||||| | |||||| | Sbjct 43424 TTTTGGGCGCGGACTGTCTCGCGACCACGGCCTTCCCTTTCGTACCTCTCGTAGAGCTCC 43483 Query 118956 TCAAACTCTTCACC---CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGA 119012 || ||||| || || |||| || | || || || |||| | ||||| |||||| Sbjct 43484 TCGAACTCGTCGCCGTACACG---TCGGCAAGACCCGGGGCCTCGTGAGGGCAAAAGAGA 43540 Query 119013 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAG 119072 | ||||| ||| | ||| || ||||||||||| || || || ||||| | ||| | Sbjct 43541 GTCCATTCACCGTTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCACAACGCGTAA 43600 Query 119073 AAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCC 119132 ||||| || || ||| | || || | || || || || | || | ||| Sbjct 43601 AAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAAGGGG 43660 Query 119133 ATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------A 119186 | || || |||||||| || |||||||| | || | | || | |||| Sbjct 43661 AAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACC---AGGACGCTTGTTG 43717 Query 119187 CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCA 119246 ||| | |||| || || | |||||| ||| | || || ||||| ||||| | || Sbjct 43718 CCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGAATCAGGCCG 43777 Query 119247 TCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGT 119304 | ||| || || || || || || ||| || ||| | | | ||||| || Sbjct 43778 TTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCT--GTGGAACGAATACGGTGGACGT 43835 Query 119305 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 119364 | |||||| || || ||| ||| || || || || | ||||| || |||| | Sbjct 43836 TGAGACCAATTCCACCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAGTGTCGTAAA 43895 Query 119365 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGG 119424 | || ||||| ||| |||| | |||| | |||||| | | || ||| ||| Sbjct 43896 TACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGG 43955 Query 119425 GTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGT 119484 | |||||||||||||| | || || | || || | || || |||||| | Sbjct 43956 GGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCGACATCAACT 44015 Query 119485 CGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAA 119544 ||| || || | | | | |||||||| ||||| ||||||| | || ||||| | Sbjct 44016 TGTACGTTTCGAGGGCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAACACGCATGA 44075 Query 119545 ACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCA 119604 ||||| || ||| |||| | | |||| || | | | ||| | |||||| Sbjct 44076 TCATGTGCTGCGGTCTTTCGGCAACTTTGCCATTGATGCGAAGCAAGTATGACCTCTCCA 44135 Query 119605 AGGTCTTGAGACCAAAATA 119623 ||||||| ||||||||| Sbjct 44136 GTGTCTTGAAACCAAAATA 44154 >seq496 Length=30664 Score = 89.7 bits (98), Expect = 6e-13 Identities = 155/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| | |||||||||||||||||||| || || |||||| || || Sbjct 5538 GGCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGGCC 5479 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| || || |||||||| | |||||| || | || || || ||||||||| Sbjct 5478 AGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAACCGCTGAAGAAGAT 5419 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-A 130193 ||||| ||| || || |||| ||||| ||||||| || | |||| || | Sbjct 5418 ACCCTCGACAGCAGCAAAGGCAATCAGACGGGATGCAAAGG-TCGAGTTCTTGTCACAGA 5360 Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 130236 ||| | ||||| | |||||||||| ||| || || || Sbjct 5359 TCCAGCGGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGAAC 5317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618424833479960