Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq546 145 9e-30
seq496 89.7 6e-13
>seq546
Length=57559
Score = 145 bits (160), Expect = 9e-30
Identities = 1140/1819 (63%), Gaps = 62/1819 (3%)
Strand=Plus/Plus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
|| ||||||||||| || |||||||| || |||||||| | | ||||| ||||
Sbjct 42366 CGCAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAGCCGGCAAAGTGCATGGAGGTG 42425
Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA- 117955
| |||| | || || | |||| || ||||| ||||| || ||||||||
Sbjct 42426 ATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTCAGCGACTGGGACTGGTCGATGAAA 42485
Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTC 118013
||| || || || || ||||| | | || || | | || | ||||| || |||
Sbjct 42486 GCG-CCGCGGTCAGCAGCCATCTGCA-CA-ATGGTGCGCTGCGAAATCTCCCAGACGGTC 42542
Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073
||||||| ||| || ||||| || || | |||| ||||| || ||| ||
Sbjct 42543 TTGTAGAGAGCCTTGATGTCATCGGGAATGTTGGGAATATCCTGGATAGAGCCATT-GCA 42601
Query 118074 TTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 118130
| | |||| | | |||||| | | |||||| | || |||| ||| ||||
Sbjct 42602 --GGCAATGATACGGTTCTTCATGTTGTCTGACCACAAGCCCATCTCGACGAGGTCCTT- 42658
Query 118131 ACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATA 118187
|||| || ||||| || |||||||| |||||| || | | |||||
Sbjct 42659 --GAGAAGCCAGGGGTTGACGACCTGGAACTCACCGGCGAGGACACGGCGCGAGTAGATG 42716
Query 118188 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG-TGGAGGCTGT 118246
|||| ||||| ||||| || || || ||| | || ||| | ||||| | ||||| ||
Sbjct 42717 TTGGAGGTGTAAGGCTCGAAACATTCGTTGA-AGCCGAGAATCTGGCTGGTCGAGGCAGT 42775
Query 118247 GGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAG 118306
||||| || || | ||| | |||||| || | ||| | | ||| | ||| ||
Sbjct 42776 CGGCATAGGGGCAACGAGCAAGCTGTTCCGCACACCGTGCTGAGCAATCTCTGACTTCAG 42835
Query 118307 AGCGTCCCAGTCGTAGTTGAGCTTT----GTCTCCCCCTGCCACATATCAAACTGGAGGA 118362
|||||||| | | || | | |||| | |||||| || |||| | ||
Sbjct 42836 GCTCTCCCAGTCCCA-TAGATCCGTAGGGGTCTTG---TTCCACATGTCGTACTGCAAGA 42891
Query 118363 TACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT 118422
||||||| || | ||||||||||| | ||||| || | || | || |||| |
Sbjct 42892 TACCTTGAGAGACAGGCGATCCCTCGTAAGTCTCGTAGGCACCGTTCTTCTTGGCCAGCT 42951
Query 118423 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA-TTGCC 118481
|| | ||| ||| || ||||| || || ||||| || || | || | |||||
Sbjct 42952 CGACGGAAGCCGTGAGAGC-GCGTGGTAGATGGTTTCGAAGATCTGTATGTTGAGTTGCC 43010
Query 118482 TTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGG 118541
| ||||||| || || || | | || | ||| |||| || || || | |
Sbjct 43011 T-GGCCTCGGGCGAGTCGAAAGGCATGCGAAGAGCGAGGAATGCATCAGCAAGGCCGTTG 43069
Query 118542 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGA 118598
||||||| |||| |||||||| | ||| || ||| | || ||| || ||
Sbjct 43070 ACACCGACAGCAATGGGGCGATGGCGCATGTTGCTCTTTCTGGC---CTCGGGAACAGGG 43126
Query 118599 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT-- 118656
|| || | ||||| | | | || | || ||| || || ||| || |||
Sbjct 43127 TAGTGGTTGATGTCGATGATCTTGTTCAAGTTCTTGACGAGGAC--TTG-GACAACATTG 43183
Query 118657 -GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 118715
| ||||| | | | ||| | | ||| ||| ||| | ||||||| ||||
Sbjct 43184 TGCAGCTTCTTGAAGTCATAGACGTTGTTCTGGACATCAACAAAGGTAGGAAGAGCGAGA 43243
Query 118716 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCAC 118775
|| |||| ||| || |||| |||||| | | |||||||| | ||| || |||
Sbjct 43244 GAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCGTGTACTCAACAATCTCGCAGCAG 43303
Query 118776 AAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 118835
| ||| || || ||||||||| | |||||| || || ||| ||| || ||||||
Sbjct 43304 AGGTTGGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 43363
Query 118836 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACA 118895
||||| ||||| | || | || ||||| || || | || ||| || || | ||| |
Sbjct 43364 TTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCACAGC 43423
Query 118896 TCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCT 118955
| || | || || || | || || || |||||| | |||||| |
Sbjct 43424 TTTTGGGCGCGGACTGTCTCGCGACCACGGCCTTCCCTTTCGTACCTCTCGTAGAGCTCC 43483
Query 118956 TCAAACTCTTCACC---CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGA 119012
|| ||||| || || |||| || | || || || |||| | ||||| ||||||
Sbjct 43484 TCGAACTCGTCGCCGTACACG---TCGGCAAGACCCGGGGCCTCGTGAGGGCAAAAGAGA 43540
Query 119013 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAG 119072
| ||||| ||| | ||| || ||||||||||| || || || ||||| | ||| |
Sbjct 43541 GTCCATTCACCGTTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCACAACGCGTAA 43600
Query 119073 AAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCC 119132
||||| || || ||| | || || | || || || || | || | |||
Sbjct 43601 AAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAAGGGG 43660
Query 119133 ATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------A 119186
| || || |||||||| || |||||||| | || | | || | ||||
Sbjct 43661 AAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACC---AGGACGCTTGTTG 43717
Query 119187 CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCA 119246
||| | |||| || || | |||||| ||| | || || ||||| ||||| | ||
Sbjct 43718 CCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGAATCAGGCCG 43777
Query 119247 TCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGT 119304
| ||| || || || || || || ||| || ||| | | | ||||| ||
Sbjct 43778 TTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCT--GTGGAACGAATACGGTGGACGT 43835
Query 119305 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 119364
| |||||| || || ||| ||| || || || || | ||||| || |||| |
Sbjct 43836 TGAGACCAATTCCACCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAGTGTCGTAAA 43895
Query 119365 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGG 119424
| || ||||| ||| |||| | |||| | |||||| | | || ||| |||
Sbjct 43896 TACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGG 43955
Query 119425 GTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGT 119484
| |||||||||||||| | || || | || || | || || |||||| |
Sbjct 43956 GGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGTAAAGCACTTTTCCGACATCAACT 44015
Query 119485 CGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAA 119544
||| || || | | | | |||||||| ||||| ||||||| | || ||||| |
Sbjct 44016 TGTACGTTTCGAGGGCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAACACGCATGA 44075
Query 119545 ACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCA 119604
||||| || ||| |||| | | |||| || | | | ||| | ||||||
Sbjct 44076 TCATGTGCTGCGGTCTTTCGGCAACTTTGCCATTGATGCGAAGCAAGTATGACCTCTCCA 44135
Query 119605 AGGTCTTGAGACCAAAATA 119623
||||||| |||||||||
Sbjct 44136 GTGTCTTGAAACCAAAATA 44154
>seq496
Length=30664
Score = 89.7 bits (98), Expect = 6e-13
Identities = 155/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074
|||||| || ||| | |||||||||||||||||||| || || |||||| || ||
Sbjct 5538 GGCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGGCC 5479
Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134
||||| || || |||||||| | |||||| || | || || || |||||||||
Sbjct 5478 AGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAACCGCTGAAGAAGAT 5419
Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-A 130193
||||| ||| || || |||| ||||| ||||||| || | |||| || |
Sbjct 5418 ACCCTCGACAGCAGCAAAGGCAATCAGACGGGATGCAAAGG-TCGAGTTCTTGTCACAGA 5360
Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 130236
||| | ||||| | |||||||||| ||| || || ||
Sbjct 5359 TCCAGCGGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGAAC 5317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618424833479960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |