Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq496 114 2e-20 >seq496 Length=30664 Score = 114 bits (126), Expect = 2e-20 Identities = 290/433 (67%), Gaps = 10/433 (2%) Strand=Plus/Plus Query 94816 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCT 94874 || ||||| ||| ||||||||||||||| ||||||||| ||| | || | ||||| Sbjct 5398 GCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTTCCTTC-GCGTCCATCTTCTGGCT 5456 Query 94875 CAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGA 94934 ||||||||| || || ||||| || || ||||||||||||||| ||||| |||||||| Sbjct 5457 CAAGAAGCGTGGCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCCCGTGACGA 5516 Query 94935 GGGACTCCACCAAGAGTTTGC--GGTGGAACTTTTCAAATTATTGCGTATTAAACCAACG 94992 ||| | ||| || ||||| | | ||| || | || || || || || Sbjct 5517 GGGCATGCACACCGACTTTGCCTGCCTGCTCTTCTCTCA-CATCAAGT-CCAAGCCTTCG 5574 Query 94993 ACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAAGGATTCATATTG 95052 | |||||| | | || | | || ||||| ||||| ||| ||| ||| | Sbjct 5575 CCCGAGACTGTGGAGAGGATCATCACCGAGGCCGTCGAGATGGAGCAAGAGTTCCTTACC 5634 Query 95053 GATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAAATGTCTGAATATATTGAG 95112 || || ||||| ||| || |||| ||||| || |||| | || || ||| Sbjct 5635 GACGCTCTTCCCGTCGCCCTGCTCGGCATGAACGCTACCCTCATGTGCCAGTACATCGAG 5694 Query 95113 TATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCAA--TTTGGAACTCCAAGA 95170 | ||| | || | || || | | || || | || | | ||||| | | Sbjct 5695 TTTGTTGCCGACCGCCTGCTG--GTGGCTCTTGGCAACAAGAAGTTCTACAACTCGACCA 5752 Query 95171 ATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGA 95230 | || || |||||||||||||||||| ||| |||| ||||| ||||||||||| ||| Sbjct 5753 ACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGC 5812 Query 95231 GGGTTGGGGACTA 95243 | ||||| ||||| Sbjct 5813 GTGTTGGTGACTA 5825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583251023090840