Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq923 123 8e-23
seq817 102 2e-16
seq731 96.9 1e-14
seq585 95.1 4e-14
>seq923
Length=2568
Score = 123 bits (136), Expect = 8e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||||| | | || || | ||| || |||||||| || || || || || || ||
Sbjct 329 ACCACCACGAAGACGGAGCACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGA 270
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
|| || | ||||| || || || || || || ||||| | || ||||| ||||| ||
Sbjct 269 CAACGTCCTGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGG 210
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
|| || || || |||||||| || | || || || ||||||| ||| || | ||| ||
Sbjct 209 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTATCCGAAGATTCGAC 150
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || | ||||||||||| || || || || || ||||||||
Sbjct 149 CTCGAGCGTGATCGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 102
>seq817
Length=164323
Score = 102 bits (112), Expect = 2e-16
Identities = 262/398 (66%), Gaps = 6/398 (2%)
Strand=Plus/Minus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
|| || ||||| || || ||||| | || |||| ||| | |||||| | || |
Sbjct 68799 CCTGAGGAAATCTCCTCCATGGTCCTGACCAAGATGAGGGAGACTGCTGAGTCTTACCTT 68740
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
|||| || || | | ||||| | || || || ||||| || || || | |||||
Sbjct 68739 GGTGGCACCGTCAACAACGCTGTCGTCACCGTCCCCGCCTACTTCAACGACTCTCAGCGC 68680
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
|| || || ||||| || ||||| || | || || || | || || || ||
Sbjct 68679 CAGGCCACCAAGGATGCCGGTCTGATTGCTGGTCTCAACGTCCTCCGTATCATCAACGAG 68620
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAG---TGACCAAGaaaaaaaT 349768
||||| ||||| || ||||| || || ||||| || | || || | || ||
Sbjct 68619 CCCACCGCTGCCGCCATTGCCTACGGTCTTGACAAGAAGACCACTGGC---GAGCGCAAC 68563
Query 349769 ATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAG 349828
| || || || || | ||||||||||| || ||||| || || || || | || |||
Sbjct 68562 GTCCTCATCTTCGACCTTGGTGGTGGTACCTTCGATGTCTCCCTGCTCACCATCGAGGAG 68503
Query 349829 GGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888
|| || || || || || | || || ||||| || || | ||||| || || || ||
Sbjct 68502 GGTATCTTCGAGGTCAAGTCCACCGCCGGTGACACTCACTTGGGTGGCGAGGACTTCGAC 68443
Query 349889 AATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCG 349926
|| || |||||| || |||||||| || || || ||
Sbjct 68442 AACCGCCTCGTTAACCACTTTGTTAATGAGTTCAAACG 68405
>seq731
Length=88763
Score = 96.9 bits (106), Expect = 1e-14
Identities = 148/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || || || ||||| ||||| || || || || |
Sbjct 88661 TTTGCATACCACCACGCAGACGCAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGT 88602
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || || || ||||| || || ||||| ||||| || || ||||| |
Sbjct 88601 AGTCGGAAAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGT 88542
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| ||||| || || || || || || || || | || || || || || | || || |
Sbjct 88541 CCGGAGGGATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAG 88482
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
|| ||||| || || | ||||| |||||
Sbjct 88481 ACTCGACTTCGAGGGTGATGGTCTTGCCGGT 88451
>seq585
Length=148504
Score = 95.1 bits (104), Expect = 4e-14
Identities = 168/245 (69%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 378202 TCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTGCA 378261
||||| || || || | || || || ||| |||||||||| | ||| || || |||
Sbjct 71230 TCTTCCAAGGCCTTGACCAGACGGCGCTGAATGTAACCAGTTTCAGCAGTCTTGACGGCA 71171
Query 378262 GTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAAGT 378321
|||||||| | ||| |||||||| |||| || ||||| || || || ||||| || |||
Sbjct 71170 GTATCAATCAGACCCTCACGACCAGCCATGGCGTGGAAAAAGAACTCGGTAGGTGTCAGT 71111
Query 378322 CCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTTGTA 378381
|||| | | || | | || ||| |||| || ||||||| | |||| || |||
Sbjct 71110 CCACGCAGGTACGAGTTTTGAACAAAGCCTCGGGCAGCTGGCGAGTAGTCATCCTTGGTA 71051
Query 378382 TAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTCTGT 378441
| || || | || || | | || ||| | ||||| || || || || || ||||
Sbjct 71050 AAGTGTGGCAGAGTGCGGTATTTGAAACCAAACGGAATGCGCTTGCCTTCGACCGACTGT 70991
Query 378442 TGACC 378446
|| ||
Sbjct 70990 TGTCC 70986
Score = 95.1 bits (104), Expect = 4e-14
Identities = 104/138 (75%), Gaps = 3/138 (2%)
Strand=Plus/Minus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| || ||||| | ||||| ||| || || | |||||||||||||||||| || ||
Sbjct 71989 CGAGGGACACCCAGGGTAACGTTC---TTGGAAGAAACACCAGCAAAGTGGAAGGTGTTG 71933
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | || || | |||||||||||| || ||||| || | || |||||||||||
Sbjct 71932 AGCGTCATCTGCGTGGCGGGCTCACCAATGGATTGCGCCGCCAAGACACCAACCATTTCG 71873
Query 377578 CCAGGATTGACAATAGCC 377595
||||| | ||||| |||
Sbjct 71872 CCAGGGCTCACAATGGCC 71855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515228365561823
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |