Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq923 123 8e-23 seq817 102 2e-16 seq731 96.9 1e-14 seq585 95.1 4e-14 >seq923 Length=2568 Score = 123 bits (136), Expect = 8e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || | ||| || |||||||| || || || || || || || Sbjct 329 ACCACCACGAAGACGGAGCACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGA 270 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 || || | ||||| || || || || || || ||||| | || ||||| ||||| || Sbjct 269 CAACGTCCTGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGG 210 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 || || || || |||||||| || | || || || ||||||| ||| || | ||| || Sbjct 209 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTATCCGAAGATTCGAC 150 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | ||||||||||| || || || || || |||||||| Sbjct 149 CTCGAGCGTGATCGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 102 >seq817 Length=164323 Score = 102 bits (112), Expect = 2e-16 Identities = 262/398 (66%), Gaps = 6/398 (2%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || || ||||| || || ||||| | || |||| ||| | |||||| | || | Sbjct 68799 CCTGAGGAAATCTCCTCCATGGTCCTGACCAAGATGAGGGAGACTGCTGAGTCTTACCTT 68740 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 |||| || || | | ||||| | || || || ||||| || || || | ||||| Sbjct 68739 GGTGGCACCGTCAACAACGCTGTCGTCACCGTCCCCGCCTACTTCAACGACTCTCAGCGC 68680 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||| || ||||| || | || || || | || || || || Sbjct 68679 CAGGCCACCAAGGATGCCGGTCTGATTGCTGGTCTCAACGTCCTCCGTATCATCAACGAG 68620 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAG---TGACCAAGaaaaaaaT 349768 ||||| ||||| || ||||| || || ||||| || | || || | || || Sbjct 68619 CCCACCGCTGCCGCCATTGCCTACGGTCTTGACAAGAAGACCACTGGC---GAGCGCAAC 68563 Query 349769 ATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAG 349828 | || || || || | ||||||||||| || ||||| || || || || | || ||| Sbjct 68562 GTCCTCATCTTCGACCTTGGTGGTGGTACCTTCGATGTCTCCCTGCTCACCATCGAGGAG 68503 Query 349829 GGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 || || || || || || | || || ||||| || || | ||||| || || || || Sbjct 68502 GGTATCTTCGAGGTCAAGTCCACCGCCGGTGACACTCACTTGGGTGGCGAGGACTTCGAC 68443 Query 349889 AATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCG 349926 || || |||||| || |||||||| || || || || Sbjct 68442 AACCGCCTCGTTAACCACTTTGTTAATGAGTTCAAACG 68405 >seq731 Length=88763 Score = 96.9 bits (106), Expect = 1e-14 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || || ||||| ||||| || || || || | Sbjct 88661 TTTGCATACCACCACGCAGACGCAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGT 88602 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || || ||||| || || ||||| ||||| || || ||||| | Sbjct 88601 AGTCGGAAAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGT 88542 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||| || || || || || || || || | || || || || || | || || | Sbjct 88541 CCGGAGGGATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAG 88482 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 || ||||| || || | ||||| ||||| Sbjct 88481 ACTCGACTTCGAGGGTGATGGTCTTGCCGGT 88451 >seq585 Length=148504 Score = 95.1 bits (104), Expect = 4e-14 Identities = 168/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 378202 TCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTGCA 378261 ||||| || || || | || || || ||| |||||||||| | ||| || || ||| Sbjct 71230 TCTTCCAAGGCCTTGACCAGACGGCGCTGAATGTAACCAGTTTCAGCAGTCTTGACGGCA 71171 Query 378262 GTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAAGT 378321 |||||||| | ||| |||||||| |||| || ||||| || || || ||||| || ||| Sbjct 71170 GTATCAATCAGACCCTCACGACCAGCCATGGCGTGGAAAAAGAACTCGGTAGGTGTCAGT 71111 Query 378322 CCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTTGTA 378381 |||| | | || | | || ||| |||| || ||||||| | |||| || ||| Sbjct 71110 CCACGCAGGTACGAGTTTTGAACAAAGCCTCGGGCAGCTGGCGAGTAGTCATCCTTGGTA 71051 Query 378382 TAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTCTGT 378441 | || || | || || | | || ||| | ||||| || || || || || |||| Sbjct 71050 AAGTGTGGCAGAGTGCGGTATTTGAAACCAAACGGAATGCGCTTGCCTTCGACCGACTGT 70991 Query 378442 TGACC 378446 || || Sbjct 70990 TGTCC 70986 Score = 95.1 bits (104), Expect = 4e-14 Identities = 104/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || || ||||| | ||||| ||| || || | |||||||||||||||||| || || Sbjct 71989 CGAGGGACACCCAGGGTAACGTTC---TTGGAAGAAACACCAGCAAAGTGGAAGGTGTTG 71933 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | || || | |||||||||||| || ||||| || | || ||||||||||| Sbjct 71932 AGCGTCATCTGCGTGGCGGGCTCACCAATGGATTGCGCCGCCAAGACACCAACCATTTCG 71873 Query 377578 CCAGGATTGACAATAGCC 377595 ||||| | ||||| ||| Sbjct 71872 CCAGGGCTCACAATGGCC 71855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515228365561823