Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq546 201 1e-46
seq496 111 2e-19
seq476 95.1 1e-14
>seq546
Length=57559
Score = 201 bits (222), Expect = 1e-46
Identities = 498/754 (66%), Gaps = 4/754 (1%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| || || | ||||||||||| || ||| ||| ||| || || ||||||
Sbjct 44075 TCATGCGTGTTGCTGTCGGTATCCACGGCGAAGACATAACGAGTGCCCTCGAAACGTACA 44016
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
| || ||| |||||| |||||| || ||| | || ||| ||||||||||||||||
Sbjct 44015 AGTTGATGTCGGAAAAGTGCTTTACTCATGCCTCCCCCACCTTGTTCAACGCTGGTACCC 43956
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
| || ||| | | |||||| || | | |||||||| ||| ||||| || |
Sbjct 43955 CCAAGCCCCAGCTTGCATCATGCTTCTTGATCGACATGAAGGAGGACAGCATCGAGGGTA 43896
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
| ||||| || |||||| ||||| || |||||| | | ||||| || ||| ||
Sbjct 43895 TTTACGACACTCTCAAGACTTGTGCTATGATTTCCAAGACGGCCGGTGGAATTGGTCTCA 43836
Query 53433 ACTGCTCGAACGTC--CGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490
|| || | ||| ||| | | ||| | || || || ||||| | || |
Sbjct 43835 ACG--TCCACCGTATTCGTTCCACAGGCTCCTACATTGCTGGCACCAACGGTACCTCCAA 43778
Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550
|| | | || |||||||| |||| ||||||||| || || |||||| |||| |||||
Sbjct 43777 CGGCCTGATTCCCATGCTCCGAGTCTACAACAACACTGCTCGCTACGTCGACCAAGGTGG 43718
Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610
||||| || | || ||||||||||| ||||| |||||||| ||| | |
Sbjct 43717 CAACAAGCGTCCTGGTGCTTTTGCCATCTACCTGGAGCCTTGGCACGCTGACGTCTTCCC 43658
Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670
|| ||||| || || ||| || || | || ||| | ||| || ||||| |||
Sbjct 43657 CTTCCTCGACCTTCGCAAGAACCACGGAAAGGAGGAGGTCCGCGCGCGCGACCTCTTTTA 43598
Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730
|| |||||||||| || || |||||| | |||||| | ||| || ||| ||
Sbjct 43597 CGCGTTGTGGATTCCCGATCTGTTCATGAAGCGTGTGGAGCAAAACGGTGAATGGACTCT 43538
Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790
| ||||| ||||| ||| || || | || ||||| || ||||| | ||| |
Sbjct 43537 CTTTTGCCCTCACGAGGCCCCGGGTCTTGCCGACGTGTACGGCGACGAGTTCGAGGAGCT 43478
Query 53791 GTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATG 53850
|| || ||||| | | ||||| ||| ||| || | || | ||
Sbjct 43477 CTACGAGAGGTACGAAAGGGAAGGCCGTGGTCGCGAGACAGTCCGCGCCCAAAAGCTGTG 43418
Query 53851 GGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTC 53910
| |||| |||||| || ||| ||||| || | || | ||| |||||||||| |
Sbjct 43417 GTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAATCCCTTTATGCTCTACAAGGATGC 43358
Query 53911 GGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944
|||| |||||||||||||||||| |||||
Sbjct 43357 TTGCAACCGCAAGAGCAACCAGAAGAACCTCGGC 43324
Score = 120 bits (132), Expect = 3e-22
Identities = 296/440 (67%), Gaps = 17/440 (4%)
Strand=Plus/Minus
Query 55494 TGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGT 55553
||||||| || || ||||| || || ||||| ||||| | ||| |||||| |
Sbjct 42795 TGCTCGTTGCCCCTATGCCGACTGCCTCGACCAGCCAGATTCTCGGCTTCAACGAATGTT 42736
Query 55554 TCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGA 55613
||||||| ||||| ||||||||||| |||||| ||| || |||||||| || |
Sbjct 42735 TCGAGCCTTACACCTCCAACATCTACTCGCGCCGTGTCCTCGCCGGTGAGTTC--CAGG- 42679
Query 55614 TCAACAAGCAC---CTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGATCA 55670
|| ||| | | || |||||||||| |||| | |||| | || |
Sbjct 42678 TCGTCAACCCCTGGCTTCTCAAGGACCTCGTCGAGATGGGCTTGTGGTCAGACAACATGA 42619
Query 55671 AGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGG---AGATTCCTCTGC 55724
||| || || |||| | || || || ||||| || | | ||||| |
Sbjct 42618 AGAACCGTATCATTGCCTGCAATGGC---TCTATCCAGGATATTCCCAACATTCC-CGAT 42563
Query 55725 GTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATG 55783
| | |||||| | ||| ||| || ||||||||| | ||| | | | | |||
Sbjct 42562 GACATCAAGGCTCTCTACAAGACCGTCTGGGAGATTTCGCAGCGCACCATTGTGCAGATG 42503
Query 55784 AGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAAT 55843
|||||| || || || | |||||||||||||||||| ||||||||| |||| || |
Sbjct 42502 GCTGCTGACCGCGGCGCTTTCATCGACCAGTCCCAGTCGCTGAACATCCACATGAAGGAG 42443
Query 55844 CCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACG 55903
||| | ||| |||| | | ||| ||||||||| ||| |||||| || ||||||||
Sbjct 42442 CCTACTATGGGCAAGATCACCTCCATGCACTTTGCCGGCTGGAAGCTTGGTCTCAAGACT 42383
Query 55904 GGTATGTACTATCTGCGGAC 55923
|| |||||||| ||||| ||
Sbjct 42382 GGCATGTACTACCTGCGTAC 42363
>seq496
Length=30664
Score = 111 bits (122), Expect = 2e-19
Identities = 287/432 (66%), Gaps = 8/432 (2%)
Strand=Plus/Minus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| ||||| || ||||| || || ||||||||||| || | | ||| |||||||||||
Sbjct 5825 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGTTGAGCGAAATGTTCTCCATG 5766
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCCCAAACTGTGCCATGAGGCGA 74582
||||||| ||||| | | ||| | ||| | |||| ||| |||||
Sbjct 5765 AAGTCGAAGGGGTTGGTCGAGTTGTAGAACTTCTTGTTGCCAAGAGCCACCAGCAGGCGG 5706
Query 74583 TCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTGCAC 74642
|| || ||||| | |||||||| ||| || | |||||||| || |
Sbjct 5705 TCGGCAACAAACTCGATGTACTGGCACATGAGGGTAGCGTTCATGCCGAGCAGGGCGACG 5646
Query 74643 GGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAATCTTGTGA 74702
|| || || ||||| | ||||| ||||| |||| ||| || ||| | |
Sbjct 5645 GGAAGAGCGTCGGTAAGGAACTCTTGCTCCATCTCGACGGCCTCGGTGATGATCCTCTCC 5586
Query 74703 AT-GTCTTTGG--AAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCAAACTC 74758
| |||| || |||| ||| | | | ||||||| | ||| | || |||||| ||
Sbjct 5585 ACAGTCTCGGGCGAAGG---CTTGGACTTGATGTGAGAGAAGAGCAGGCA-GGCAAAGTC 5530
Query 74759 CTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAG 74818
||| ||| || || | | || | || || || || | |||||||||||| ||
Sbjct 5529 GGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCATCAG 5470
Query 74819 TCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGAC 74878
||||||||||| | ||| ||||||| ||||||||| ||||||||||| || |||||
Sbjct 5469 GCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAACCGCTGAAGAAGATACCCTCGAC 5410
Query 74879 ACACGCAAAGGC 74890
| ||||||||
Sbjct 5409 AGCAGCAAAGGC 5398
>seq476
Length=90259
Score = 95.1 bits (104), Expect = 1e-14
Identities = 268/412 (65%), Gaps = 0/412 (0%)
Strand=Plus/Plus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
||||| || ||||| || ||||| || | ||||||||||||| || || ||||||
Sbjct 1850 CCAGTACCAATACCGTCCGCACCGTTGACGAGAATCATCGGCAGGATGGGCACGTAGTTT 1909
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271
| ||||| | | || || || | || |||||| || | ||| |||
Sbjct 1910 GCCGGCTCAATGGTCTTGCCATCCTCTTGCTCATATGTGAGCAGCGGCTCATCAGTCGAG 1969
Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331
| ||| ||| | | | || | ||||| ||| |||||||||||| ||| ||||||
Sbjct 1970 TGGAAGATGCGCCGAGCAAAAGGCGACAGGCGGGTGTAAATGTAACGAGCGCTGGCAGCA 2029
Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391
|| | ||||| || || | ||| || | || ||||||||||||| || | ||||
Sbjct 2030 TCGCTTCCACCTTGAAAGCGGGAACCAAAGTTACCGCTCGGCTCCAAGACATTGATGTTG 2089
Query 117392 TTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCA 117451
|| | ||| || ||||| ||||| | || || || || || ||| |||||
Sbjct 2090 TTCGAGCCAACGAAGTTCTGAGCAAGACCAACGATTGTCTGCTGAAGAGACGCATCACCG 2149
Query 117452 TGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGAC 117511
| | ||| ||| | | |||| || || || | | ||||| |||||
Sbjct 2150 TAGGCATAGTTTGTCATACCTCCAACGTGACCAGCAAGTTCAATGACCTTGATGTCCTTT 2209
Query 117512 GTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCA 117563
||| |||| |||||| ||||| || | |||||||| || | |||||||
Sbjct 2210 TTCACGTTCCTCTTGAAGCAGGTGTACACGACCTTGCGTTGGCCAGGCTTCA 2261
Score = 84.2 bits (92), Expect = 2e-11
Identities = 82/103 (80%), Gaps = 2/103 (2%)
Strand=Plus/Plus
Query 153840 ACTGAAAACGTTAGCCAA-CTTGGCACCGTAACCATTGCGACCGCCCGTCACGCGTTGTT 153898
|||||||| ||| || || ||| ||||||||||| |||||||| |||||||| ||| |
Sbjct 3883 ACTGAAAATGTT-GCAAAGCTTTGCACCGTAACCGTTGCGACCACCCGTCACCTTTTGCT 3941
Query 153899 CCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGAT 153941
|||||||| ||||| || |||||| ||||| || |||||
Sbjct 3942 GCTCGTCGTCATAGTTCGAAGAGGTCAAGAGGTGGCCGAAGAT 3984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547206827291800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |