Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq546 201 1e-46 seq496 111 2e-19 seq476 95.1 1e-14 >seq546 Length=57559 Score = 201 bits (222), Expect = 1e-46 Identities = 498/754 (66%), Gaps = 4/754 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || || | ||||||||||| || ||| ||| ||| || || |||||| Sbjct 44075 TCATGCGTGTTGCTGTCGGTATCCACGGCGAAGACATAACGAGTGCCCTCGAAACGTACA 44016 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 | || ||| |||||| |||||| || ||| | || ||| |||||||||||||||| Sbjct 44015 AGTTGATGTCGGAAAAGTGCTTTACTCATGCCTCCCCCACCTTGTTCAACGCTGGTACCC 43956 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 | || ||| | | |||||| || | | |||||||| ||| ||||| || | Sbjct 43955 CCAAGCCCCAGCTTGCATCATGCTTCTTGATCGACATGAAGGAGGACAGCATCGAGGGTA 43896 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 | ||||| || |||||| ||||| || |||||| | | ||||| || ||| || Sbjct 43895 TTTACGACACTCTCAAGACTTGTGCTATGATTTCCAAGACGGCCGGTGGAATTGGTCTCA 43836 Query 53433 ACTGCTCGAACGTC--CGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || || | ||| ||| | | ||| | || || || ||||| | || | Sbjct 43835 ACG--TCCACCGTATTCGTTCCACAGGCTCCTACATTGCTGGCACCAACGGTACCTCCAA 43778 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || | | || |||||||| |||| ||||||||| || || |||||| |||| ||||| Sbjct 43777 CGGCCTGATTCCCATGCTCCGAGTCTACAACAACACTGCTCGCTACGTCGACCAAGGTGG 43718 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 ||||| || | || ||||||||||| ||||| |||||||| ||| | | Sbjct 43717 CAACAAGCGTCCTGGTGCTTTTGCCATCTACCTGGAGCCTTGGCACGCTGACGTCTTCCC 43658 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670 || ||||| || || ||| || || | || ||| | ||| || ||||| ||| Sbjct 43657 CTTCCTCGACCTTCGCAAGAACCACGGAAAGGAGGAGGTCCGCGCGCGCGACCTCTTTTA 43598 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730 || |||||||||| || || |||||| | |||||| | ||| || ||| || Sbjct 43597 CGCGTTGTGGATTCCCGATCTGTTCATGAAGCGTGTGGAGCAAAACGGTGAATGGACTCT 43538 Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790 | ||||| ||||| ||| || || | || ||||| || ||||| | ||| | Sbjct 43537 CTTTTGCCCTCACGAGGCCCCGGGTCTTGCCGACGTGTACGGCGACGAGTTCGAGGAGCT 43478 Query 53791 GTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATG 53850 || || ||||| | | ||||| ||| ||| || | || | || Sbjct 43477 CTACGAGAGGTACGAAAGGGAAGGCCGTGGTCGCGAGACAGTCCGCGCCCAAAAGCTGTG 43418 Query 53851 GGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTC 53910 | |||| |||||| || ||| ||||| || | || | ||| |||||||||| | Sbjct 43417 GTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAATCCCTTTATGCTCTACAAGGATGC 43358 Query 53911 GGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944 |||| |||||||||||||||||| ||||| Sbjct 43357 TTGCAACCGCAAGAGCAACCAGAAGAACCTCGGC 43324 Score = 120 bits (132), Expect = 3e-22 Identities = 296/440 (67%), Gaps = 17/440 (4%) Strand=Plus/Minus Query 55494 TGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGT 55553 ||||||| || || ||||| || || ||||| ||||| | ||| |||||| | Sbjct 42795 TGCTCGTTGCCCCTATGCCGACTGCCTCGACCAGCCAGATTCTCGGCTTCAACGAATGTT 42736 Query 55554 TCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGA 55613 ||||||| ||||| ||||||||||| |||||| ||| || |||||||| || | Sbjct 42735 TCGAGCCTTACACCTCCAACATCTACTCGCGCCGTGTCCTCGCCGGTGAGTTC--CAGG- 42679 Query 55614 TCAACAAGCAC---CTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGATCA 55670 || ||| | | || |||||||||| |||| | |||| | || | Sbjct 42678 TCGTCAACCCCTGGCTTCTCAAGGACCTCGTCGAGATGGGCTTGTGGTCAGACAACATGA 42619 Query 55671 AGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGG---AGATTCCTCTGC 55724 ||| || || |||| | || || || ||||| || | | ||||| | Sbjct 42618 AGAACCGTATCATTGCCTGCAATGGC---TCTATCCAGGATATTCCCAACATTCC-CGAT 42563 Query 55725 GTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATG 55783 | | |||||| | ||| ||| || ||||||||| | ||| | | | | ||| Sbjct 42562 GACATCAAGGCTCTCTACAAGACCGTCTGGGAGATTTCGCAGCGCACCATTGTGCAGATG 42503 Query 55784 AGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAAT 55843 |||||| || || || | |||||||||||||||||| ||||||||| |||| || | Sbjct 42502 GCTGCTGACCGCGGCGCTTTCATCGACCAGTCCCAGTCGCTGAACATCCACATGAAGGAG 42443 Query 55844 CCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACG 55903 ||| | ||| |||| | | ||| ||||||||| ||| |||||| || |||||||| Sbjct 42442 CCTACTATGGGCAAGATCACCTCCATGCACTTTGCCGGCTGGAAGCTTGGTCTCAAGACT 42383 Query 55904 GGTATGTACTATCTGCGGAC 55923 || |||||||| ||||| || Sbjct 42382 GGCATGTACTACCTGCGTAC 42363 >seq496 Length=30664 Score = 111 bits (122), Expect = 2e-19 Identities = 287/432 (66%), Gaps = 8/432 (2%) Strand=Plus/Minus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || ||||| || ||||| || || ||||||||||| || | | ||| ||||||||||| Sbjct 5825 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGTTGAGCGAAATGTTCTCCATG 5766 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCCCAAACTGTGCCATGAGGCGA 74582 ||||||| ||||| | | ||| | ||| | |||| ||| ||||| Sbjct 5765 AAGTCGAAGGGGTTGGTCGAGTTGTAGAACTTCTTGTTGCCAAGAGCCACCAGCAGGCGG 5706 Query 74583 TCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTGCAC 74642 || || ||||| | |||||||| ||| || | |||||||| || | Sbjct 5705 TCGGCAACAAACTCGATGTACTGGCACATGAGGGTAGCGTTCATGCCGAGCAGGGCGACG 5646 Query 74643 GGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAATCTTGTGA 74702 || || || ||||| | ||||| ||||| |||| ||| || ||| | | Sbjct 5645 GGAAGAGCGTCGGTAAGGAACTCTTGCTCCATCTCGACGGCCTCGGTGATGATCCTCTCC 5586 Query 74703 AT-GTCTTTGG--AAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCAAACTC 74758 | |||| || |||| ||| | | | ||||||| | ||| | || |||||| || Sbjct 5585 ACAGTCTCGGGCGAAGG---CTTGGACTTGATGTGAGAGAAGAGCAGGCA-GGCAAAGTC 5530 Query 74759 CTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAG 74818 ||| ||| || || | | || | || || || || | |||||||||||| || Sbjct 5529 GGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCATCAG 5470 Query 74819 TCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGAC 74878 ||||||||||| | ||| ||||||| ||||||||| ||||||||||| || ||||| Sbjct 5469 GCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAACCGCTGAAGAAGATACCCTCGAC 5410 Query 74879 ACACGCAAAGGC 74890 | |||||||| Sbjct 5409 AGCAGCAAAGGC 5398 >seq476 Length=90259 Score = 95.1 bits (104), Expect = 1e-14 Identities = 268/412 (65%), Gaps = 0/412 (0%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 ||||| || ||||| || ||||| || | ||||||||||||| || || |||||| Sbjct 1850 CCAGTACCAATACCGTCCGCACCGTTGACGAGAATCATCGGCAGGATGGGCACGTAGTTT 1909 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 | ||||| | | || || || | || |||||| || | ||| ||| Sbjct 1910 GCCGGCTCAATGGTCTTGCCATCCTCTTGCTCATATGTGAGCAGCGGCTCATCAGTCGAG 1969 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | ||| ||| | | | || | ||||| ||| |||||||||||| ||| |||||| Sbjct 1970 TGGAAGATGCGCCGAGCAAAAGGCGACAGGCGGGTGTAAATGTAACGAGCGCTGGCAGCA 2029 Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391 || | ||||| || || | ||| || | || ||||||||||||| || | |||| Sbjct 2030 TCGCTTCCACCTTGAAAGCGGGAACCAAAGTTACCGCTCGGCTCCAAGACATTGATGTTG 2089 Query 117392 TTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCA 117451 || | ||| || ||||| ||||| | || || || || || ||| ||||| Sbjct 2090 TTCGAGCCAACGAAGTTCTGAGCAAGACCAACGATTGTCTGCTGAAGAGACGCATCACCG 2149 Query 117452 TGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGAC 117511 | | ||| ||| | | |||| || || || | | ||||| ||||| Sbjct 2150 TAGGCATAGTTTGTCATACCTCCAACGTGACCAGCAAGTTCAATGACCTTGATGTCCTTT 2209 Query 117512 GTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCA 117563 ||| |||| |||||| ||||| || | |||||||| || | ||||||| Sbjct 2210 TTCACGTTCCTCTTGAAGCAGGTGTACACGACCTTGCGTTGGCCAGGCTTCA 2261 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/103 (80%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 153840 ACTGAAAACGTTAGCCAA-CTTGGCACCGTAACCATTGCGACCGCCCGTCACGCGTTGTT 153898 |||||||| ||| || || ||| ||||||||||| |||||||| |||||||| ||| | Sbjct 3883 ACTGAAAATGTT-GCAAAGCTTTGCACCGTAACCGTTGCGACCACCCGTCACCTTTTGCT 3941 Query 153899 CCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGAT 153941 |||||||| ||||| || |||||| ||||| || ||||| Sbjct 3942 GCTCGTCGTCATAGTTCGAAGAGGTCAAGAGGTGGCCGAAGAT 3984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547206827291800