Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq546 205 1e-47
seq731 150 2e-31
seq923 140 4e-28
seq670 125 8e-24
seq363 98.7 1e-15
seq476 86.0 7e-12
>seq546
Length=57559
Score = 205 bits (226), Expect = 1e-47
Identities = 1121/1759 (64%), Gaps = 68/1759 (4%)
Strand=Plus/Plus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| |||| ||||| ||||||||||| |||||||| || |||||||||| | ||||
Sbjct 42357 GCCTGCGTACGCAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAGCCGGCAAAGTGC 42416
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| || ||| ||| | | || || | || |||| ||||||||| ||||| |||||
Sbjct 42417 ATGGAGGTGATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTCAGCGACTGGGACTGG 42476
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCAT 80211
||||||||| || || || || ||||| | | ||| | || | ||| |||||
Sbjct 42477 TCGATGAAAGCGCCGCGGTCAGCAGCCATCTGCACAATGGTGCGCTGCGAAATCTCCCAG 42536
Query 80212 ACTGTACGATACA---CCTTACGAAGCTCCTCTGGAATGT---CCAGATTTTGCACACTG 80265
|| || || | |||| || | || || ||||||| | || || | | |
Sbjct 42537 ACGGTCTTGTAGAGAGCCTT--GATG-TCATCGGGAATGTTGGGAATATCCTGGATAGAG 42593
Query 80266 CCACCGTCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGA 80325
||| | | || | || |||| | | ||| | || | || | ||
Sbjct 42594 CCATTGCAGGCAATGATACGGTTCTTCATGTTGTCTGACCACAAGCCCATCTCGACGAGG 42653
Query 80326 TCTTTCACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGA 80382
|| || | ||| | | ||| | | || ||||| || |||||| || |||
Sbjct 42654 TCCTTGAGAAGCCAGGGGTTGACGA-CCTG--GAACTCACCGGCGAGGACACGGCGCGAG 42710
Query 80383 TACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTC 80442
|| | ||| | ||||||||||| || |||||| ||||| ||||| || || ||
Sbjct 42711 TAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGAAGCCGAGAATCTG-GC--TGGTC 42767
Query 80443 ---GCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCT------TCT-T 80492
|| |||||||| ||| | || | || ||||||| ||||||| ||| |
Sbjct 42768 GAGGCAGTCGGCATAGGGGCAACGAGCAAGCTGTTCCGCACACCGTGCTGAGCAATCTCT 42827
Query 80493 GATATC---CTCGCGCAAATCTGACCAAAAATCAACCCCAACGCTGTGACCCCACATGTC 80549
|| || ||| | | | || ||| | || || | | | | |||||||||
Sbjct 42828 GACTTCAGGCTCTC-CCAGTC---CCATAGAT---CCGTAGGGGTCTTGTTCCACATGTC 42880
Query 80550 GTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGT 80609
|| ||||||||| || | || | || || ||| || | |||||||| | || | | |
Sbjct 42881 GTACTGCAAGATACCTTGAGAGACAGGCGATCCCTCGTAAGTCTCGTAGGCACCGTTCTT 42940
Query 80610 CTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTT 80669
|||||||||||| || || | || | |||||| || ||| || |||| |
Sbjct 42941 CTTGGCCAGCTCGACGGAAGCCGTGAGAG-CGCGTGGTAGATGGTTTCGAAGATCTGTAT 42999
Query 80670 GTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGC 80729
||| | | |||| || |||||| | || || | | ||| | |||||
Sbjct 43000 GTTGAGTTGCCTGGCCTCGGGCGAGTCGAAAGGCATGCGAAGAGCGAGGAATGCATCAGC 43059
Query 80730 CAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTC-GGCCTCCG 80788
||||| | || |||| || || ||||| |||||| |||| | || || |||||| |
Sbjct 43060 AAGGCCGTTGACACCGACAGCAATGGGGCGATGGCGCATGTT-GCTCTTTCTGGCCTCGG 43118
Query 80789 GAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTG-TAACAACCCGTGTA 80847
||| ||||| ||| | ||||||| ||||| ||| | || | || | |
Sbjct 43119 GAACAGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTT-CTTGACGAGGACTTGGACA 43177
Query 80848 ACATCATGAAGTTTCTGAAAGTC---GAATTGGTTC---CCCTTCACAAATGCCGGAAGG 80901
|||| || || |||| ||||| || | |||| | | ||||| | |||||
Sbjct 43178 ACATTGTGCAGCTTCTTGAAGTCATAGACGTTGTTCTGGACATCAACAAAGGTAGGAAGA 43237
Query 80902 CTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCC 80961
|| || |||| |||||| || || ||||| |||| | | || |||| || || ||
Sbjct 43238 GCGAGAGAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCGTGTACTCAACAATCTCG 43297
Query 80962 GTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAA 81021
||| | || || ||| || || ||||| |||||||| |||| |||||||
Sbjct 43298 CAGCAGAGGTTGGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAA 43357
Query 81022 GCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCC 81081
|| ||||||||| ||| | || | ||||||||| ||| | || ||||||||| | |
Sbjct 43358 GCATCCTTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATAC 43417
Query 81082 CAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA- 81140
|| | || | || ||| || ||| |||||| | ||| | ||||
Sbjct 43418 CACAGCTTTTGGGCGCGGACTGTCTCGCGACCACGGCCTTCCCTTTCGTACCTCTCGTAG 43477
Query 81141 AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACAT 81200
||| || ||||||| | | |||| | || | || | ||| ||||| |||||| |
Sbjct 43478 AGC-TCCTCGAACTCGTCGCCGTACACGTCGGCAAGACCCGGGGCCTCGTGAGGGCAAAA 43536
Query 81201 CAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGC 81260
|| ||| || || | ||| ||| ||||||||| || || ||||| | ||
Sbjct 43537 GAGAGTCCATTCACCGTTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCACAACGC 43596
Query 81261 GGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAA 81320
| || |||||||| ||| ||||||| | || ||||| ||| | ||||| ||
Sbjct 43597 GTAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAA 43656
Query 81321 GTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC-----CCCTTGCG 81374
| | || ||| || ||||| |||||||| || | ||| | | || | ||||
Sbjct 43657 GGGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGACGCTTG-- 43714
Query 81375 ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGAT 81434
|||||| |||| |||||| || ||||| ||| | || || | ||| || || |
Sbjct 43715 -TTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGAATCAG 43773
Query 81435 ACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGG--CGCGCACCTTGCTG 81492
|| | || |||||| || || | || || || ||| || || ||
Sbjct 43774 GCCGTTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCTGTGGAACGAATACGGTGGAC 43833
Query 81493 ATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCA 81552
||| ||||| || ||||| | | ||| |||||| |||||| || | || ||
Sbjct 43834 GTTG--AGACCAATTCCACCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAGTGTCG 43891
Query 81553 TAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGG 81612
||||| ||||||||||| || | |||||||| | |||||| || || | ||| |||
Sbjct 43892 TAAATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTG-GGG 43950
Query 81613 CTT-TTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTT-TGACA 81670
||| | || || ||||||| || |||| || ||| | ||| || || ||||
Sbjct 43951 CTTGGGGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGT-AAAGCACTTTTCCGACA 44009
Query 81671 TCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACAC 81730
||| | || ||||| | | | | || || || ||||| ||||||| ||| ||||
Sbjct 44010 TCAACTTGTACGTTTCGAGGGCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAACAC 44069
Query 81731 GCATAAACATGTACTGGGG 81749
|||| | ||||| ||| ||
Sbjct 44070 GCATGATCATGTGCTGCGG 44088
>seq731
Length=88763
Score = 150 bits (166), Expect = 2e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || || |||||||| ||||| || | ||| | ||| ||||| |
Sbjct 88167 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGTCC 88226
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| ||||||||||||||||| ||||| || |||||||||||||| || || ||||| |||
Sbjct 88227 AAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTTATCTTCGCTGGCAAG 88286
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || ||||| | ||| ||||| | ||||| || |||| ||||| || || || ||
Sbjct 88287 CAGCTTGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACGCTCCAC 88346
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || || || || ||
Sbjct 88347 CTCGTCCTCCGCCTGCGTGGCGG 88369
Score = 141 bits (156), Expect = 1e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || || || || || ||||| || | ||| | || | ||| |
Sbjct 88451 ACCGGCAAGACCATCACCCTCGAAGTCGAGTCTTCGGACACCATCGACAACGTCAAGTCG 88510
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || || ||||||||||| || ||||| ||||||||||| || || || ||||| |||
Sbjct 88511 AAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAGCAGCGCCTCATCTTCGCTGGCAAG 88570
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || ||||| | ||| ||||| | ||||| || |||| ||||| |||||||| ||
Sbjct 88571 CAGCTTGAGGACGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCCACTCTCCAC 88630
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| ||||||| || |||||
Sbjct 88631 CTCGTCCTGCGTCTGCGTGGTGG 88653
>seq923
Length=2568
Score = 140 bits (154), Expect = 4e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||| ||||| || || || ||||| || ||
Sbjct 102 ATGCAGATCTTCGTCAAGACCCTGACCGGAAAGACGATCACGCTCGAGGTCGAATCTTCG 161
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| || | ||| | || ||||||||||||||||| || || || ||||||
Sbjct 162 GATACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 221
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || || || || ||||| |||||||||| | || | | ||||| ||
Sbjct 222 CAGCGCTTGATCTTCGCAGGCAAGCAGCTCGAGGATGGCAGGACGTTGTCGGACTACAAC 281
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| || || || ||| | || | |||||||| ||||| ||
Sbjct 282 ATCCAGAAGGAGTCTACCCTGCATTTGGTGCTCCGTCTTCGTGGTGGTCA 331
>seq670
Length=49272
Score = 125 bits (138), Expect = 8e-24
Identities = 137/182 (75%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| |||||||| || || |||||||| || || || ||||| ||||| || | |||
Sbjct 38589 CTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 38530
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| ||| | ||| | || || |||||||||||||| ||||| || ||||||||||| ||
Sbjct 38529 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCT 38470
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
|| || || || ||||| |||||||| | || ||||| | ||||| || |||| ||
Sbjct 38469 GATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAA 38410
Query 27594 GG 27595
||
Sbjct 38409 GG 38408
>seq363
Length=34683
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| ||||| || ||||||||||| | || || || || ||||| ||||||
Sbjct 5426 GACAAGGAGGGCATTCCCCCCGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAG 5367
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | || ||||| | ||||| || |||| ||||| || || || || || ||| ||
Sbjct 5366 GACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTCCACCTGGTCCTG 5307
Query 27619 CGTCTTCGCGGTGG 27632
|| || || |||||
Sbjct 5306 CGCCTGCGTGGTGG 5293
>seq476
Length=90259
Score = 86.0 bits (94), Expect = 7e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 30352 ACCGAAAAAATCTGGATCCCCGAACTCATTTTTGGGCACCTTTTGACAAGCTCCAACTAC 30411
|||||||| || | || || || | || || || ||||| ||||| || |||||
Sbjct 4011 ACCGAAAAGATTTATATTCCAGAGTTGATCTTCGGCCACCTCTTGACCTCTTCGAACTAT 3952
Query 30412 AACGACGAGGAGCAGCGCGTGACGGGTGGACGAAATGGCTACGGTGCAAAGCTCGCCAAC 30471
|||||||| |||| ||||||||||| || || || |||||||||||||| ||||
Sbjct 3951 GACGACGAGCAGCAAAAGGTGACGGGTGGTCGCAACGGTTACGGTGCAAAGCTTTGCAAC 3892
Query 30472 GTTTTCAGTTCC 30483
|||||||| ||
Sbjct 3891 ATTTTCAGTACC 3880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570300840171920
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