Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq546 205 1e-47 seq731 150 2e-31 seq923 140 4e-28 seq670 125 8e-24 seq363 98.7 1e-15 seq476 86.0 7e-12 >seq546 Length=57559 Score = 205 bits (226), Expect = 1e-47 Identities = 1121/1759 (64%), Gaps = 68/1759 (4%) Strand=Plus/Plus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 ||| |||| ||||| ||||||||||| |||||||| || |||||||||| | |||| Sbjct 42357 GCCTGCGTACGCAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAGCCGGCAAAGTGC 42416 Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151 || || ||| ||| | | || || | || |||| ||||||||| ||||| ||||| Sbjct 42417 ATGGAGGTGATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTCAGCGACTGGGACTGG 42476 Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCAT 80211 ||||||||| || || || || ||||| | | ||| | || | ||| ||||| Sbjct 42477 TCGATGAAAGCGCCGCGGTCAGCAGCCATCTGCACAATGGTGCGCTGCGAAATCTCCCAG 42536 Query 80212 ACTGTACGATACA---CCTTACGAAGCTCCTCTGGAATGT---CCAGATTTTGCACACTG 80265 || || || | |||| || | || || ||||||| | || || | | | Sbjct 42537 ACGGTCTTGTAGAGAGCCTT--GATG-TCATCGGGAATGTTGGGAATATCCTGGATAGAG 42593 Query 80266 CCACCGTCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGA 80325 ||| | | || | || |||| | | ||| | || | || | || Sbjct 42594 CCATTGCAGGCAATGATACGGTTCTTCATGTTGTCTGACCACAAGCCCATCTCGACGAGG 42653 Query 80326 TCTTTCACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGA 80382 || || | ||| | | ||| | | || ||||| || |||||| || ||| Sbjct 42654 TCCTTGAGAAGCCAGGGGTTGACGA-CCTG--GAACTCACCGGCGAGGACACGGCGCGAG 42710 Query 80383 TACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTC 80442 || | ||| | ||||||||||| || |||||| ||||| ||||| || || || Sbjct 42711 TAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGAAGCCGAGAATCTG-GC--TGGTC 42767 Query 80443 ---GCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCT------TCT-T 80492 || |||||||| ||| | || | || ||||||| ||||||| ||| | Sbjct 42768 GAGGCAGTCGGCATAGGGGCAACGAGCAAGCTGTTCCGCACACCGTGCTGAGCAATCTCT 42827 Query 80493 GATATC---CTCGCGCAAATCTGACCAAAAATCAACCCCAACGCTGTGACCCCACATGTC 80549 || || ||| | | | || ||| | || || | | | | ||||||||| Sbjct 42828 GACTTCAGGCTCTC-CCAGTC---CCATAGAT---CCGTAGGGGTCTTGTTCCACATGTC 42880 Query 80550 GTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGT 80609 || ||||||||| || | || | || || ||| || | |||||||| | || | | | Sbjct 42881 GTACTGCAAGATACCTTGAGAGACAGGCGATCCCTCGTAAGTCTCGTAGGCACCGTTCTT 42940 Query 80610 CTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTT 80669 |||||||||||| || || | || | |||||| || ||| || |||| | Sbjct 42941 CTTGGCCAGCTCGACGGAAGCCGTGAGAG-CGCGTGGTAGATGGTTTCGAAGATCTGTAT 42999 Query 80670 GTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGC 80729 ||| | | |||| || |||||| | || || | | ||| | ||||| Sbjct 43000 GTTGAGTTGCCTGGCCTCGGGCGAGTCGAAAGGCATGCGAAGAGCGAGGAATGCATCAGC 43059 Query 80730 CAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTC-GGCCTCCG 80788 ||||| | || |||| || || ||||| |||||| |||| | || || |||||| | Sbjct 43060 AAGGCCGTTGACACCGACAGCAATGGGGCGATGGCGCATGTT-GCTCTTTCTGGCCTCGG 43118 Query 80789 GAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTG-TAACAACCCGTGTA 80847 ||| ||||| ||| | ||||||| ||||| ||| | || | || | | Sbjct 43119 GAACAGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTT-CTTGACGAGGACTTGGACA 43177 Query 80848 ACATCATGAAGTTTCTGAAAGTC---GAATTGGTTC---CCCTTCACAAATGCCGGAAGG 80901 |||| || || |||| ||||| || | |||| | | ||||| | ||||| Sbjct 43178 ACATTGTGCAGCTTCTTGAAGTCATAGACGTTGTTCTGGACATCAACAAAGGTAGGAAGA 43237 Query 80902 CTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCC 80961 || || |||| |||||| || || ||||| |||| | | || |||| || || || Sbjct 43238 GCGAGAGAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCGTGTACTCAACAATCTCG 43297 Query 80962 GTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAA 81021 ||| | || || ||| || || ||||| |||||||| |||| ||||||| Sbjct 43298 CAGCAGAGGTTGGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAA 43357 Query 81022 GCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCC 81081 || ||||||||| ||| | || | ||||||||| ||| | || ||||||||| | | Sbjct 43358 GCATCCTTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATAC 43417 Query 81082 CAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA- 81140 || | || | || ||| || ||| |||||| | ||| | |||| Sbjct 43418 CACAGCTTTTGGGCGCGGACTGTCTCGCGACCACGGCCTTCCCTTTCGTACCTCTCGTAG 43477 Query 81141 AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACAT 81200 ||| || ||||||| | | |||| | || | || | ||| ||||| |||||| | Sbjct 43478 AGC-TCCTCGAACTCGTCGCCGTACACGTCGGCAAGACCCGGGGCCTCGTGAGGGCAAAA 43536 Query 81201 CAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGC 81260 || ||| || || | ||| ||| ||||||||| || || ||||| | || Sbjct 43537 GAGAGTCCATTCACCGTTTTGCTCCACACGCTTCATGAACAGATCGGGAATCCACAACGC 43596 Query 81261 GGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAA 81320 | || |||||||| ||| ||||||| | || ||||| ||| | ||||| || Sbjct 43597 GTAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAA 43656 Query 81321 GTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC-----CCCTTGCG 81374 | | || ||| || ||||| |||||||| || | ||| | | || | |||| Sbjct 43657 GGGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGACGCTTG-- 43714 Query 81375 ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGAT 81434 |||||| |||| |||||| || ||||| ||| | || || | ||| || || | Sbjct 43715 -TTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTCGGAGCATGGGAATCAG 43773 Query 81435 ACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGG--CGCGCACCTTGCTG 81492 || | || |||||| || || | || || || ||| || || || Sbjct 43774 GCCGTTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCTGTGGAACGAATACGGTGGAC 43833 Query 81493 ATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCA 81552 ||| ||||| || ||||| | | ||| |||||| |||||| || | || || Sbjct 43834 GTTG--AGACCAATTCCACCGGCCGTCTTGGAAATCATAGCACAAGTCTTGAGAGTGTCG 43891 Query 81553 TAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGG 81612 ||||| ||||||||||| || | |||||||| | |||||| || || | ||| ||| Sbjct 43892 TAAATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTG-GGG 43950 Query 81613 CTT-TTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTT-TGACA 81670 ||| | || || ||||||| || |||| || ||| | ||| || || |||| Sbjct 43951 CTTGGGGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGT-AAAGCACTTTTCCGACA 44009 Query 81671 TCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACAC 81730 ||| | || ||||| | | | | || || || ||||| ||||||| ||| |||| Sbjct 44010 TCAACTTGTACGTTTCGAGGGCACTCGTTATGTCTTCGCCGTGGATACCGACAGCAACAC 44069 Query 81731 GCATAAACATGTACTGGGG 81749 |||| | ||||| ||| || Sbjct 44070 GCATGATCATGTGCTGCGG 44088 >seq731 Length=88763 Score = 150 bits (166), Expect = 2e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || |||||||| ||||| || | ||| | ||| ||||| | Sbjct 88167 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGTCC 88226 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||| ||||| || |||||||||||||| || || ||||| ||| Sbjct 88227 AAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTTATCTTCGCTGGCAAG 88286 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||| | ||| ||||| | ||||| || |||| ||||| || || || || Sbjct 88287 CAGCTTGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACGCTCCAC 88346 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || || || || Sbjct 88347 CTCGTCCTCCGCCTGCGTGGCGG 88369 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || || || ||||| || | ||| | || | ||| | Sbjct 88451 ACCGGCAAGACCATCACCCTCGAAGTCGAGTCTTCGGACACCATCGACAACGTCAAGTCG 88510 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || || ||||||||||| || ||||| ||||||||||| || || || ||||| ||| Sbjct 88511 AAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAGCAGCGCCTCATCTTCGCTGGCAAG 88570 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||| | ||| ||||| | ||||| || |||| ||||| |||||||| || Sbjct 88571 CAGCTTGAGGACGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCCACTCTCCAC 88630 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| ||||||| || ||||| Sbjct 88631 CTCGTCCTGCGTCTGCGTGGTGG 88653 >seq923 Length=2568 Score = 140 bits (154), Expect = 4e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||| ||||| || || || ||||| || || Sbjct 102 ATGCAGATCTTCGTCAAGACCCTGACCGGAAAGACGATCACGCTCGAGGTCGAATCTTCG 161 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || | ||| | || ||||||||||||||||| || || || |||||| Sbjct 162 GATACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 221 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || || || ||||| |||||||||| | || | | ||||| || Sbjct 222 CAGCGCTTGATCTTCGCAGGCAAGCAGCTCGAGGATGGCAGGACGTTGTCGGACTACAAC 281 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| || || || ||| | || | |||||||| ||||| || Sbjct 282 ATCCAGAAGGAGTCTACCCTGCATTTGGTGCTCCGTCTTCGTGGTGGTCA 331 >seq670 Length=49272 Score = 125 bits (138), Expect = 8e-24 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || |||||||| || || || ||||| ||||| || | ||| Sbjct 38589 CTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 38530 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || |||||||||||||| ||||| || ||||||||||| || Sbjct 38529 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCT 38470 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || || || ||||| |||||||| | || ||||| | ||||| || |||| || Sbjct 38469 GATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAA 38410 Query 27594 GG 27595 || Sbjct 38409 GG 38408 >seq363 Length=34683 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| ||||| || ||||||||||| | || || || || ||||| |||||| Sbjct 5426 GACAAGGAGGGCATTCCCCCCGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAG 5367 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || ||||| | ||||| || |||| ||||| || || || || || ||| || Sbjct 5366 GACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTCCACCTGGTCCTG 5307 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 5306 CGCCTGCGTGGTGG 5293 >seq476 Length=90259 Score = 86.0 bits (94), Expect = 7e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 30352 ACCGAAAAAATCTGGATCCCCGAACTCATTTTTGGGCACCTTTTGACAAGCTCCAACTAC 30411 |||||||| || | || || || | || || || ||||| ||||| || ||||| Sbjct 4011 ACCGAAAAGATTTATATTCCAGAGTTGATCTTCGGCCACCTCTTGACCTCTTCGAACTAT 3952 Query 30412 AACGACGAGGAGCAGCGCGTGACGGGTGGACGAAATGGCTACGGTGCAAAGCTCGCCAAC 30471 |||||||| |||| ||||||||||| || || || |||||||||||||| |||| Sbjct 3951 GACGACGAGCAGCAAAAGGTGACGGGTGGTCGCAACGGTTACGGTGCAAAGCTTTGCAAC 3892 Query 30472 GTTTTCAGTTCC 30483 |||||||| || Sbjct 3891 ATTTTCAGTACC 3880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570300840171920