Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq838 120 2e-22
>seq838
Length=49465
Score = 120 bits (132), Expect = 2e-22
Identities = 234/343 (68%), Gaps = 2/343 (1%)
Strand=Plus/Minus
Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30177
||||||||| |||| || ||||||||| | ||| || ||||| | | ||| |
Sbjct 13341 GGGGTTCCACGCGCTCATGATGATGCGGCGGTCGAAAGGCTTGTTGCGCAGCTTGTCGAT 13282
Query 30178 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30237
| | | |||||| || || || || | |||||| || |||| |||||||
Sbjct 13281 GACTTCGGCCAGCTGGTCGACGCCTTGTCCGGTGTAGTCGGCGTGGCAGTCCTTGTACTC 13222
Query 30238 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30297
|| || ||||||| ||| ||||| ||||| || ||||| ||||| |||||||| | |||
Sbjct 13221 GGCGCCAAAATGCCGCCATTGGAATCCGTAAACTGGTCCAAGGTCGCCCTCTTCGCGGTG 13162
Query 30298 CTCGAAGCCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30356
|| || || | |||||| ||| |||| || |||||| |||||||||| || | |
Sbjct 13161 -TCCCAGTCCGACGCTGTCCAGAAACTCTCGAGACCCGTTGCCGTCCCAGATTTTGATTC 13103
Query 30357 CCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30416
| || || ||| || ||| ||| || | ||||||||||||||| | |
Sbjct 13102 CTGCATCTGACAGCGGCTTCGAGGACGTGCTGCCCGAAATGAACCACAGCAGCTCGGCAA 13043
Query 30417 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459
|||||| | ||| || | |||||| ||||| || || ||
Sbjct 13042 TGACGGCGCGCAGAAATACGCGCTTGGTGGTGAGAAGCGGCAA 13000
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 29852 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCT 29911
||||| | ||| | ||| |||||| | ||||| | || ||||||||||| |||||
Sbjct 13655 GGCTCGCGCTCCAACTGCACCTTCAGGGCCTCCACATGGTCGAGGTAGACGTGGGCGTCG 13596
Query 29912 CCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTG 29971
|||| | |||| | | || || | || || |||||| |||| ||| | |||
Sbjct 13595 CCCATGGTGTGCGTTAGCGAGCCGGGCACCAGGTCGCAGACGTGCGCCAGCATATGCGTC 13536
Query 29972 AGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGG 30031
|| || | ||||||||| ||||| || || || |||||||||||||| | |||| |||
Sbjct 13535 AGCAGCGCGTAGCTGGCAATGTTGAAAGGCACGCCGAGCCCCATGTCGCAGGACCGTTGG 13476
Query 30032 TA 30033
||
Sbjct 13475 TA 13474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406303759491372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |