Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq731 96.9 3e-15 seq363 87.8 2e-12 >seq731 Length=88763 Score = 96.9 bits (106), Expect = 3e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 ||||||||| | || || ||||| || || | |||||| | || || | || || Sbjct 88167 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGTCC 88226 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || ||||| ||||| || ||||| || || || || |||||| | || | ||| ||||| Sbjct 88227 AAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTTATCTTCGCTGGCAAG 88286 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGAC 27184 || | || ||| || ||| | ||||| |||||||| || ||||||||||| Sbjct 88287 CAGCTTGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGAC 88339 >seq363 Length=34683 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 27080 AGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGA 27139 |||||| || ||||| || ||||| || ||||| || || | ||||||||| || | || Sbjct 5427 AGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGA 5368 Query 27140 AGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 ||| | ||| | || || |||||||| || |||||||||||| | || |||| | Sbjct 5367 GGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTCCACCTGGTCCT 5308 Query 27200 GCGTTTGCGGGGTGGCAT 27217 ||| |||| ||||| || Sbjct 5307 GCGCCTGCGTGGTGGTAT 5290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434911109680320