Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq731 96.9 3e-15
seq363 87.8 2e-12
>seq731
Length=88763
Score = 96.9 bits (106), Expect = 3e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071
||||||||| | || || ||||| || || | |||||| | || || | || ||
Sbjct 88167 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGTCC 88226
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| ||||| ||||| || ||||| || || || || |||||| | || | ||| |||||
Sbjct 88227 AAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTTATCTTCGCTGGCAAG 88286
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGAC 27184
|| | || ||| || ||| | ||||| |||||||| || |||||||||||
Sbjct 88287 CAGCTTGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGAC 88339
>seq363
Length=34683
Score = 87.8 bits (96), Expect = 2e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 27080 AGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGA 27139
|||||| || ||||| || ||||| || ||||| || || | ||||||||| || | ||
Sbjct 5427 AGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGA 5368
Query 27140 AGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199
||| | ||| | || || |||||||| || |||||||||||| | || |||| |
Sbjct 5367 GGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTCCACCTGGTCCT 5308
Query 27200 GCGTTTGCGGGGTGGCAT 27217
||| |||| ||||| ||
Sbjct 5307 GCGCCTGCGTGGTGGTAT 5290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434911109680320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |