Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq838 93.3 4e-14
>seq838
Length=49465
Score = 93.3 bits (102), Expect = 4e-14
Identities = 188/275 (68%), Gaps = 8/275 (3%)
Strand=Plus/Plus
Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCG-GGGGTTCCCATCTCG 34386
|| |||||||||| ||||||||||||| ||||||||| |||| || | | ||
Sbjct 13108 AAAATCTGGGACGGCAACGGGTCTCGAGAGTTTCTGGAC-AGCGTCGGACTGGGACACCG 13166
Query 34387 GGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
|| ||||||||| | || || || ||||| ||||| ||| | || ||||| || |||||
Sbjct 13167 CGAAGAGGGCGACCTTGGACCAGTTTACGGATTCCAATGGCGGCATTTTGGCGCCGAGTA 13226
Query 34447 TCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGA 34506
|| || | || ||||| | ||||| || | ||||||||| | || |||||
Sbjct 13227 CAAGGACTGCCACGCCGACTACACCGGACAAGGCGTCGACCAGCTGGCCGAAGTCATCGA 13286
Query 34507 CACCTTGAAGCGGAAC---CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAA 34563
|| | ||| ||| ||| ||| | | ||| | ||| |||||||||||||
Sbjct 13287 CA---AGCTGCGCAACAAGCCTTTCGACCGCCGCATCATCATGAGCGCGTGGAACCCCGC 13343
Query 34564 GGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACA 34598
| || ||||||||| || || |||||||
Sbjct 13344 CCAACTGAAGAAGATGGCGCTGCCGCCTTGCCACA 13378
Score = 93.3 bits (102), Expect = 4e-14
Identities = 188/275 (68%), Gaps = 8/275 (3%)
Strand=Plus/Minus
Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806
||||||| || || ||||||||| || | ||||||||||||| ||| | ||
Sbjct 13378 TGTGGCAAGGCGGCAGCGCCATCTTCTTCAGTTGGGCGGGGTTCCACGCGCTCATGATGA 13319
Query 6807 TCCTTCTGTCATCAGG---GTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCG 6863
| | | ||| ||| ||| ||| | ||||||| || | |||||||||
Sbjct 13318 TGCGGCGGTCGAAAGGCTTGTTGCGCAGCT---TGTCGATGACTTCGGCCAGCTGGTCGA 13262
Query 6864 CTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACT 6923
| || ||||| | ||||| || | || || ||||| || ||||| || | ||| |
Sbjct 13261 CGCCTTGTCCGGTGTAGTCGGCGTGGCAGTCCTTGTACTCGGCGCCAAAATGCCGCCATT 13202
Query 6924 GGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCC-CGCTTGTCC 6982
|||| ||||| || || || | ||||||||| || || | | || |||| ||||
Sbjct 13201 GGAATCCGTAAACTGGTCCAAGGTCGCCCTCTTCGCGGTGTCCCAGTCCGACGCT-GTCC 13143
Query 6983 AGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017
||||| ||||||||||||| |||||||||| ||
Sbjct 13142 AGAAACTCTCGAGACCCGTTGCCGTCCCAGATTTT 13108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448254886001520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |