Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq838 93.3 4e-14 >seq838 Length=49465 Score = 93.3 bits (102), Expect = 4e-14 Identities = 188/275 (68%), Gaps = 8/275 (3%) Strand=Plus/Plus Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCG-GGGGTTCCCATCTCG 34386 || |||||||||| ||||||||||||| ||||||||| |||| || | | || Sbjct 13108 AAAATCTGGGACGGCAACGGGTCTCGAGAGTTTCTGGAC-AGCGTCGGACTGGGACACCG 13166 Query 34387 GGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || ||||||||| | || || || ||||| ||||| ||| | || ||||| || ||||| Sbjct 13167 CGAAGAGGGCGACCTTGGACCAGTTTACGGATTCCAATGGCGGCATTTTGGCGCCGAGTA 13226 Query 34447 TCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGA 34506 || || | || ||||| | ||||| || | ||||||||| | || ||||| Sbjct 13227 CAAGGACTGCCACGCCGACTACACCGGACAAGGCGTCGACCAGCTGGCCGAAGTCATCGA 13286 Query 34507 CACCTTGAAGCGGAAC---CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAA 34563 || | ||| ||| ||| ||| | | ||| | ||| ||||||||||||| Sbjct 13287 CA---AGCTGCGCAACAAGCCTTTCGACCGCCGCATCATCATGAGCGCGTGGAACCCCGC 13343 Query 34564 GGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACA 34598 | || ||||||||| || || ||||||| Sbjct 13344 CCAACTGAAGAAGATGGCGCTGCCGCCTTGCCACA 13378 Score = 93.3 bits (102), Expect = 4e-14 Identities = 188/275 (68%), Gaps = 8/275 (3%) Strand=Plus/Minus Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806 ||||||| || || ||||||||| || | ||||||||||||| ||| | || Sbjct 13378 TGTGGCAAGGCGGCAGCGCCATCTTCTTCAGTTGGGCGGGGTTCCACGCGCTCATGATGA 13319 Query 6807 TCCTTCTGTCATCAGG---GTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCG 6863 | | | ||| ||| ||| ||| | ||||||| || | ||||||||| Sbjct 13318 TGCGGCGGTCGAAAGGCTTGTTGCGCAGCT---TGTCGATGACTTCGGCCAGCTGGTCGA 13262 Query 6864 CTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACT 6923 | || ||||| | ||||| || | || || ||||| || ||||| || | ||| | Sbjct 13261 CGCCTTGTCCGGTGTAGTCGGCGTGGCAGTCCTTGTACTCGGCGCCAAAATGCCGCCATT 13202 Query 6924 GGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCC-CGCTTGTCC 6982 |||| ||||| || || || | ||||||||| || || | | || |||| |||| Sbjct 13201 GGAATCCGTAAACTGGTCCAAGGTCGCCCTCTTCGCGGTGTCCCAGTCCGACGCT-GTCC 13143 Query 6983 AGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017 ||||| ||||||||||||| |||||||||| || Sbjct 13142 AGAAACTCTCGAGACCCGTTGCCGTCCCAGATTTT 13108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448254886001520