Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq923 161 2e-34
seq731 158 3e-33
seq670 143 6e-29
seq546 114 3e-20
seq363 98.7 2e-15
>seq923
Length=2568
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | || || || ||||| || |||||||| || |||| | ||
Sbjct 323 ACGAAGACGGAGCACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGT 264
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| ||||| || |||||||||||||||||||| | ||| || |||||||| || | ||
Sbjct 263 CCTGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCC 204
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||| ||||| || ||||| || || || || || ||| ||||||||
Sbjct 203 CTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTATCCGAAGATTCGACCTCGAG 144
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||||||||| || || ||||| || || | ||||||
Sbjct 143 CGTGATCGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 102
>seq731
Length=88763
Score = 158 bits (174), Expect = 3e-33
Identities = 149/190 (78%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| ||||||||||| || |||||||| || || | |||||| | || ||
Sbjct 88638 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCGTCC 88579
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| ||||| || ||||| ||||| | || ||||||||
Sbjct 88578 TCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCT 88519
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||||||||| || || || ||||| ||||| |||
Sbjct 88518 TGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCGAGGGTGATGGTC 88459
Query 211083 TTTCCCGTGA 211092
|| || ||||
Sbjct 88458 TTGCCGGTGA 88449
Score = 149 bits (164), Expect = 1e-30
Identities = 147/190 (77%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || || ||||| || |||||||| || || | ||||| | || ||
Sbjct 88354 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCC 88295
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||||||||| || || ||||| || |||| || |||||||||
Sbjct 88294 TCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 88235
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| ||||| || ||||||||||| ||| || ||||| || ||||| |||
Sbjct 88234 TGAATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTC 88175
Query 211083 TTTCCCGTGA 211092
|| || ||||
Sbjct 88174 TTGCCGGTGA 88165
>seq670
Length=49272
Score = 143 bits (158), Expect = 6e-29
Identities = 139/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | ||||| | || || || ||||||||||| ||||||||
Sbjct 38410 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 38469
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || ||||| || |||| || ||||||||||||||||| || || || |||
Sbjct 38470 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 38529
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|||||||| ||| || |||||||| ||||| ||||| ||||| || ||||| || ||
Sbjct 38530 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 38588
>seq546
Length=57559
Score = 114 bits (126), Expect = 3e-20
Identities = 179/255 (70%), Gaps = 6/255 (2%)
Strand=Plus/Plus
Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||||||||| | ||||| ||||| ||||| || ||||| | ||
Sbjct 43330 GTTCTTCTGGTTGCTCTTGCGGTTGCAA---GCATCCTTGTAGAGCATAAAGGGATTGCC 43386
Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209
||| | |||||| |||| ||| || ||| |||| ||||| ||||| ||||
Sbjct 43387 GGTCTCGGTCTGAGCCTCGAGGATGGCATACCACAGCTTTTGGGCGCGGACTGTCTCGCG 43446
Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269
| ||||| | |||||| | | ||||||||||||||| || || || || ||
Sbjct 43447 ACCACGGCCTTCCCTTTCGTACCTCTCGTAGAGCTCCTCGAACTCGTCGCCGTACACGTC 43506
Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329
| ||||| || ||||| | ||||| |||||| |||| | ||||| || || ||| ||
Sbjct 43507 GGCAAGACCCGGGGCCTCGTGAGGGCAAAAGAGAGTCCATTCACCGTTTTGCTCCACACG 43566
Query 178330 TTTCATGAAGAGGTC 178344
|||||||| || ||
Sbjct 43567 CTTCATGAACAGATC 43581
>seq363
Length=34683
Score = 98.7 bits (108), Expect = 2e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || || ||||| || |||||||| || |||| ||||| | || ||
Sbjct 5308 AGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 5367
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| ||||||||||| |||||||| | ||| || ||||| || |||| || ||||||||
Sbjct 5368 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 5426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159132083957465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |