Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq731 136 9e-27 seq1119 116 9e-21 seq670 116 9e-21 seq923 113 1e-19 seq546 95.1 3e-14 >seq731 Length=88763 Score = 136 bits (150), Expect = 9e-27 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| || || || || |||| ||||| |||| | || | || || Sbjct 88354 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCC 88295 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||||||||| || || ||||| || ||||| || |||||||| Sbjct 88294 TCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 88235 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| ||||||||||| |||| || || || | ||||| ||| Sbjct 88234 TGAATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTC 88175 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 88174 TTGCCGGT 88167 Score = 136 bits (150), Expect = 9e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| |||||||||||||| || || |||| ||||| |||| | || Sbjct 88648 ACGCAGACGCAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGT 88589 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| ||||||||||| || || || ||||| || || || || Sbjct 88588 GCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCC 88529 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| ||| || ||||||||||| || | || || || | Sbjct 88528 CTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCGAG 88469 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 88468 GGTGATGGTCTTGCCGGT 88451 >seq1119 Length=6527 Score = 116 bits (128), Expect = 9e-21 Identities = 192/274 (70%), Gaps = 5/274 (2%) Strand=Plus/Minus Query 7447 TATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAAGG 7506 |||||||| |||| ||||| || | ||||| ||| |||||| || | ||||| Sbjct 5747 TATTTAATCTTTGCATTATTTTCAGGACTAATAGGAACTGCATTTTCAGTGTTAATAAGA 5688 Query 7507 TTAGAATTAGCTGCTCCGGGTTCTCAA-ATATTGAGTGGTAATAGCCAACTTTACAACGT 7565 |||||| || | | || ||| |||| |||||| | |||| ||| | ||||| | Sbjct 5687 TTAGAACTATCAGGACCAGGTGTTCAATATATTGCA-GATAAT---CAATTATACAATGC 5632 Query 7566 TATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGG 7625 || || || || || || || | ||||| |||||| | |||||||| | | ||||| Sbjct 5631 CATCATAACAGCCCACGCTATTATGATGATATTCTTTATGGTTATGCCTGCATTAATAGG 5572 Query 7626 CGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAG 7685 || || || |||| || | || ||| | | || | ||| |||||||| || || || Sbjct 5571 AGGATTTGGTAATTTTTTATTACCATTATTAGTCGGAGGTCCGGATATGGCATTCCCTAG 5512 Query 7686 GCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719 || || ||||||||||| |||||| |||| ||| Sbjct 5511 ACTAAATAATATAAGTTTCTGATTATTACCTCCT 5478 >seq670 Length=49272 Score = 116 bits (128), Expect = 9e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| | || | || || || |||||||| || |||||||| Sbjct 38410 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 38469 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || ||||| || |||||||| |||||||| ||| ||| ||| Sbjct 38470 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 38529 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| |||| || || || | ||||| ||||||||||||| || || | ||| Sbjct 38530 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 38588 >seq923 Length=2568 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | || || || || || || |||| ||||| || | ||| || Sbjct 323 ACGAAGACGGAGCACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGT 264 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || ||||| || |||||||| || |||||||| | || || ||||| ||||| || || Sbjct 263 CCTGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCC 204 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||| || || || || || || | ||| || || | Sbjct 203 CTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTATCCGAAGATTCGACCTCGAG 144 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||| || |||| || || | ||| | ||||| Sbjct 143 CGTGATCGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 102 >seq546 Length=57559 Score = 95.1 bits (104), Expect = 3e-14 Identities = 184/272 (68%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 193500 TTCTGGTTGTTCTTTCGACAGATGGCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCC 193559 ||||||||| |||| || | || || ||||||| || ||||| |||| ||| Sbjct 43334 TTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATAAAGGGATTGCCGGTCTCG 43393 Query 193560 GCTTGAGCGACGAGAATGTGATGCCAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTTT 193619 | ||||| |||| ||| || ||| || | ||| || |||||| | | Sbjct 43394 GTCTGAGCCTCGAGGATGGCATACCACAGCTTTTGGGCGCGGACTGTCTCGCGACCACGG 43453 Query 193620 CCTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGA 193679 |||||||| |||||| | ||||| || ||||| || || | ||||| | ||| | ||| Sbjct 43454 CCTTCCCTTTCGTACCTCTCGTAGAGCTCCTCGAACTCGTCGCCGTACACGTCGGCAAGA 43513 Query 193680 CCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCATG 193739 || || || || | |||||||||||| |||| || || | ||||| | ||||||| Sbjct 43514 CCCGGGGCCTCGTGAGGGCAAAAGAGAGTCCATTCACCGTTTTGCTCCACACGCTTCATG 43573 Query 193740 AAGAGGTCAGATGTCCAAATGGCGTAGAAAAG 193771 || || || | |||| | ||||| || || Sbjct 43574 AACAGATCGGGAATCCACAACGCGTAAAAGAG 43605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192510710450654