Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq838 107 2e-18 >seq838 Length=49465 Score = 107 bits (118), Expect = 2e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 29624 GGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCT 29683 ||||| | ||| | ||| | | |||| | ||||| ||||| ||||||||||| || || Sbjct 13655 GGCTCGCGCTCCAACTGCACCTTCAGGGCCTCCACATGGTCGAGGTAGACGTGGGCGTCG 13596 Query 29684 CCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTG 29743 |||| |||||| | | || || | || || |||||| |||| ||| | ||| Sbjct 13595 CCCATGGTGTGCGTTAGCGAGCCGGGCACCAGGTCGCAGACGTGCGCCAGCATATGCGTC 13536 Query 29744 AGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGG 29803 || || | ||||||||| ||||| || ||||| |||||||||||||| | |||| ||| Sbjct 13535 AGCAGCGCGTAGCTGGCAATGTTGAAAGGCACGCCGAGCCCCATGTCGCAGGACCGTTGG 13476 Query 29804 TA 29805 || Sbjct 13475 TA 13474 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 ||||||| ||| ||||| ||||| || ||||| ||||| |||||||| | ||| || || Sbjct 13214 AAATGCCGCCATTGGAATCCGTAAACTGGTCCAAGGTCGCCCTCTTCGCGGTG-TCCCAG 13156 Query 30077 CCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135 || | |||||| ||| |||| || |||||| |||||||||| || | || || Sbjct 13155 TCCGACGCTGTCCAGAAACTCTCGAGACCCGTTGCCGTCCCAGATTTTGATTCCTGCATC 13096 Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 30195 || ||| || ||| ||| || | ||||||||||||||| | | |||||| Sbjct 13095 TGACAGCGGCTTCGAGGACGTGCTGCCCGAAATGAACCACAGCAGCTCGGCAATGACGGC 13036 Query 30196 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30231 | ||| || | |||||| ||||| || || || Sbjct 13035 GCGCAGAAATACGCGCTTGGTGGTGAGAAGCGGCAA 13000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406156561897126