Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq838 120 2e-22 >seq838 Length=49465 Score = 120 bits (132), Expect = 2e-22 Identities = 234/343 (68%), Gaps = 2/343 (1%) Strand=Plus/Minus Query 27384 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 27443 ||||||||| |||| || ||||||||| | ||| || ||||| | | ||| | Sbjct 13341 GGGGTTCCACGCGCTCATGATGATGCGGCGGTCGAAAGGCTTGTTGCGCAGCTTGTCGAT 13282 Query 27444 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTC 27503 | | | |||||| || || || || | |||||| | |||| ||||||| Sbjct 13281 GACTTCGGCCAGCTGGTCGACGCCTTGTCCGGTGTAGTCGGCGTGGCAGTCCTTGTACTC 13222 Query 27504 TGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 27563 || || ||||||| ||||||||| ||||| || ||||| ||||| |||||||| | ||| Sbjct 13221 GGCGCCAAAATGCCGCCATTGGAATCCGTAAACTGGTCCAAGGTCGCCCTCTTCGCGGTG 13162 Query 27564 CTCGAAGCCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 27622 || || || | |||||| ||| |||| || |||||| |||||||||| || | | Sbjct 13161 -TCCCAGTCCGACGCTGTCCAGAAACTCTCGAGACCCGTTGCCGTCCCAGATTTTGATTC 13103 Query 27623 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 27682 | || || ||| || ||| ||| || | ||||||||||||||| | | Sbjct 13102 CTGCATCTGACAGCGGCTTCGAGGACGTGCTGCCCGAAATGAACCACAGCAGCTCGGCAA 13043 Query 27683 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725 |||||| | ||| || | |||||| ||||| || || || Sbjct 13042 TGACGGCGCGCAGAAATACGCGCTTGGTGGTGAGAAGCGGCAA 13000 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27118 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 27177 ||||| | ||| | ||| |||||| | ||||| || || ||||||||||| ||||| Sbjct 13655 GGCTCGCGCTCCAACTGCACCTTCAGGGCCTCCACATGGTCGAGGTAGACGTGGGCGTCG 13596 Query 27178 CCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTG 27237 |||| |||||| | | || || | || || |||||| |||| ||| | ||| Sbjct 13595 CCCATGGTGTGCGTTAGCGAGCCGGGCACCAGGTCGCAGACGTGCGCCAGCATATGCGTC 13536 Query 27238 AGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGG 27297 || || | ||||||||| ||||| || || || |||||||||||||| | |||| ||| Sbjct 13535 AGCAGCGCGTAGCTGGCAATGTTGAAAGGCACGCCGAGCCCCATGTCGCAGGACCGTTGG 13476 Query 27298 TA 27299 || Sbjct 13475 TA 13474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369501160982171