Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq923 172 1e-37
seq731 152 1e-31
seq670 147 5e-30
seq496 122 2e-22
seq363 111 3e-19
>seq923
Length=2568
Score = 172 bits (190), Expect = 1e-37
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| ||| | || || || |||||||||||||| |
Sbjct 329 ACCACCACGAAGACGGAGCACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGA 270
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| ||| | ||||||||| || || || || || |||||||| || || |||||| |||
Sbjct 269 CAACGTCCTGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGG 210
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| || ||||| | || ||| | || || || ||||||| ||||||
Sbjct 209 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTATCCGAAGATTCGAC 150
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||||||||| || |||| ||||| ||||| ||||||||
Sbjct 149 CTCGAGCGTGATCGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 102
>seq731
Length=88763
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || || || || || | ||| || || |||||||||||||| |
Sbjct 88654 ACCACCACGCAGACGCAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 88595
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| || ||||| || || || || || ||||| | || || ||||| ||
Sbjct 88594 AAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGG 88535
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| |||||||||||||||||||| | || ||| | ||||| |||||||||| |||||
Sbjct 88534 GATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGACTCGAC 88475
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|||||| ||||| ||||| || ||
Sbjct 88474 TTCGAGGGTGATGGTCTTGCCGGT 88451
Score = 125 bits (138), Expect = 1e-23
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||||||||| || || || || | ||| || || |||||||||||||| |
Sbjct 88370 ACCGCCACGCAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 88311
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| || ||||| || || || || || ||||| | ||| || ||||| ||
Sbjct 88310 GAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGG 88251
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| || ||||| | || || | ||||| ||||| || | |||||
Sbjct 88250 AATGCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCGAC 88191
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| || ||||| ||||| || ||
Sbjct 88190 CTCAAGGGTGATGGTCTTGCCGGT 88167
Score = 89.7 bits (98), Expect = 1e-12
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|||||||||||||| |||||||| | || ||| | ||||| ||||| || | || ||
Sbjct 88761 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGACGACTCAACC 88702
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| ||||| ||||| || |||||
Sbjct 88701 TCGAGCGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 88655
>seq670
Length=49272
Score = 147 bits (162), Expect = 5e-30
Identities = 140/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | || |||||||| ||||| || || || ||||| ||||||
Sbjct 38410 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 38469
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| || || ||||| ||||| ||||||||||| |||||||| | || || | |||
Sbjct 38470 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 38529
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| |||||||| | ||||| ||||| ||||| ||||| ||||||| ||||| |||||
Sbjct 38530 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 38588
>seq496
Length=30664
Score = 122 bits (134), Expect = 2e-22
Identities = 160/220 (73%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 230193 GAGTTCATTTGCGACGCTATTCC--TTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250
|||||| || ||||||| |||| | ||| || |||||||||| ||| ||||||
Sbjct 5623 GAGTTCCTTACCGACGCTCTTCCCGTCGCC--CTGCTCGGCATGAACGCTACCCTCATGT 5680
Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310
| || || ||||| || || || || || | | ||||| || || || |||| | |
Sbjct 5681 GCCAGTACATCGAGTTTGTTGCCGACCGCCTGCTGGTGGCTCTTGGCAACAAGAAGTTCT 5740
Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370
| ||||| | |||||||||| || |||||| |||||| ||| | || || || ||||
Sbjct 5741 ACAACTCGACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACT 5800
Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
||||||| |||||||| | || || |||| | |||||||
Sbjct 5801 TCTTCGAGAAGCGTGTTGGTGACTACCAAAAGGCCGGTGT 5840
>seq363
Length=34683
Score = 111 bits (122), Expect = 3e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || ||||| || | || || || |||||||||||||| |
Sbjct 5292 ACCACCACGCAGGCGCAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 5351
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || ||||| |||||||| || || ||||| ||
Sbjct 5352 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGGGG 5411
Query 282992 AATACCCTCCTTGTCT 283007
||| ||||||||||||
Sbjct 5412 AATGCCCTCCTTGTCT 5427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046721215385014
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |