Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq923 172 1e-37 seq731 152 1e-31 seq670 147 5e-30 seq496 122 2e-22 seq363 111 3e-19 >seq923 Length=2568 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| ||| | || || || |||||||||||||| | Sbjct 329 ACCACCACGAAGACGGAGCACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGA 270 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||| | ||||||||| || || || || || |||||||| || || |||||| ||| Sbjct 269 CAACGTCCTGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGG 210 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| | || ||| | || || || ||||||| |||||| Sbjct 209 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTATCCGAAGATTCGAC 150 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || |||| ||||| ||||| |||||||| Sbjct 149 CTCGAGCGTGATCGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 102 >seq731 Length=88763 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | ||| || || |||||||||||||| | Sbjct 88654 ACCACCACGCAGACGCAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 88595 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| || ||||| || || || || || ||||| | || || ||||| || Sbjct 88594 AAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGG 88535 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||||||||||||||| | || ||| | ||||| |||||||||| ||||| Sbjct 88534 GATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGACTCGAC 88475 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 |||||| ||||| ||||| || || Sbjct 88474 TTCGAGGGTGATGGTCTTGCCGGT 88451 Score = 125 bits (138), Expect = 1e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||||||||| || || || || | ||| || || |||||||||||||| | Sbjct 88370 ACCGCCACGCAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 88311 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || || || ||||| | ||| || ||||| || Sbjct 88310 GAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGG 88251 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| | || || | ||||| ||||| || | ||||| Sbjct 88250 AATGCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCGAC 88191 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||| || || Sbjct 88190 CTCAAGGGTGATGGTCTTGCCGGT 88167 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| |||||||| | || ||| | ||||| ||||| || | || || Sbjct 88761 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGACGACTCAACC 88702 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || |||| ||||| ||||| || ||||| Sbjct 88701 TCGAGCGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 88655 >seq670 Length=49272 Score = 147 bits (162), Expect = 5e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || |||||||| ||||| || || || ||||| |||||| Sbjct 38410 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 38469 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || || ||||| ||||| ||||||||||| |||||||| | || || | ||| Sbjct 38470 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 38529 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||||||| | ||||| ||||| ||||| ||||| ||||||| ||||| ||||| Sbjct 38530 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 38588 >seq496 Length=30664 Score = 122 bits (134), Expect = 2e-22 Identities = 160/220 (73%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 230193 GAGTTCATTTGCGACGCTATTCC--TTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||| || ||||||| |||| | ||| || |||||||||| ||| |||||| Sbjct 5623 GAGTTCCTTACCGACGCTCTTCCCGTCGCC--CTGCTCGGCATGAACGCTACCCTCATGT 5680 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 | || || ||||| || || || || || | | ||||| || || || |||| | | Sbjct 5681 GCCAGTACATCGAGTTTGTTGCCGACCGCCTGCTGGTGGCTCTTGGCAACAAGAAGTTCT 5740 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||||| | |||||||||| || |||||| |||||| ||| | || || || |||| Sbjct 5741 ACAACTCGACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACT 5800 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| |||||||| | || || |||| | ||||||| Sbjct 5801 TCTTCGAGAAGCGTGTTGGTGACTACCAAAAGGCCGGTGT 5840 >seq363 Length=34683 Score = 111 bits (122), Expect = 3e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || ||||| || | || || || |||||||||||||| | Sbjct 5292 ACCACCACGCAGGCGCAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 5351 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| |||||||| || || ||||| || Sbjct 5352 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGGGG 5411 Query 282992 AATACCCTCCTTGTCT 283007 ||| |||||||||||| Sbjct 5412 AATGCCCTCCTTGTCT 5427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046721215385014