Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq670 114 9e-21 seq923 107 1e-18 seq731 107 1e-18 seq363 87.8 1e-12 >seq670 Length=49272 Score = 114 bits (126), Expect = 9e-21 Identities = 137/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| |||| ||| ||| |||| || |||||||| ||||| |||| Sbjct 38408 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 38467 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||| |||||||| || | || | || ||||| ||| ||||| ||| || ||| Sbjct 38468 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 38527 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| | ||| || ||||| | || || ||||| ||||| |||||||| || Sbjct 38528 --CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGAC 38585 Query 44326 GAAG 44329 |||| Sbjct 38586 GAAG 38589 >seq923 Length=2568 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGT 44186 ||||| || || || |||||| ||||||||||| || | | | | || | || | Sbjct 311 CACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTCCTGC-CATCCT 253 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | |||||||| || || |||||||| |||||||| || | || | || ||||| ||| Sbjct 252 CGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCT 193 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| | | | || || || | ||||| ||||| | ||| ||||||| Sbjct 192 GAATCTTCGACTTGACGTTGTCAATCGTATCCGAAGATTCGACCTCGAGCGTGATCGTCT 133 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || |||||||| |||||||| ||||| Sbjct 132 TTCCGGTCAGGGTCTTGACGAAGATCTGCAT 102 >seq731 Length=88763 Score = 107 bits (118), Expect = 1e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| ||||| |||||| ||||||||||| |||| ||| ||| |||| || Sbjct 88351 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCA 88292 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | ||||||||| || | || | || ||||| ||| Sbjct 88291 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 88232 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | |||||||||| ||| || ||||| | || || ||||| Sbjct 88231 ATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 88172 Query 44309 CCCGTGA 44315 || |||| Sbjct 88171 CCGGTGA 88165 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || || ||||| || ||| |||||| ||||||||||| Sbjct 88660 TTGCATACCACCACGCAGACGCAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTA 88601 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||| || ||| |||| || |||||||| || || ||||| | |||||||| || Sbjct 88600 GTCGGAAAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTC 88541 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | ||| | || ||||| || |||||| ||| | | | |||||||| | || Sbjct 88540 CGGAGGGATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGA 88481 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGA 44315 || || || | || || ||||| || |||| Sbjct 88480 CTCGACTTCGAGGGTGATGGTCTTGCCGGTGA 88449 >seq363 Length=34683 Score = 87.8 bits (96), Expect = 1e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || |||||||| || || |||||| ||||||||||| || Sbjct 5289 CATACCACCACGCAGGCGCAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 5348 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| |||| || |||||||| ||||| |||||||| |||||||| || | Sbjct 5349 CGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGG 5408 Query 44227 AGGCACACCTTCCTTTTC 44244 || | || ||||| || Sbjct 5409 GGGAATGCCCTCCTTGTC 5426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359984516519397