Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq670 114 9e-21
seq923 107 1e-18
seq731 107 1e-18
seq363 87.8 1e-12
>seq670
Length=49272
Score = 114 bits (126), Expect = 9e-21
Identities = 137/184 (74%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| |||| ||| ||| |||| || |||||||| ||||| ||||
Sbjct 38408 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 38467
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| |||||||| || | || | || ||||| ||| ||||| ||| || |||
Sbjct 38468 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 38527
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||| | ||| || ||||| | || || ||||| ||||| |||||||| ||
Sbjct 38528 --CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGAC 38585
Query 44326 GAAG 44329
||||
Sbjct 38586 GAAG 38589
>seq923
Length=2568
Score = 107 bits (118), Expect = 1e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGT 44186
||||| || || || |||||| ||||||||||| || | | | | || | || |
Sbjct 311 CACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTCCTGC-CATCCT 253
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| |||||||| || || |||||||| |||||||| || | || | || ||||| |||
Sbjct 252 CGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCT 193
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| | | | || || || | ||||| ||||| | ||| |||||||
Sbjct 192 GAATCTTCGACTTGACGTTGTCAATCGTATCCGAAGATTCGACCTCGAGCGTGATCGTCT 133
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || |||||||| |||||||| |||||
Sbjct 132 TTCCGGTCAGGGTCTTGACGAAGATCTGCAT 102
>seq731
Length=88763
Score = 107 bits (118), Expect = 1e-18
Identities = 136/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| ||||| |||||| ||||||||||| |||| ||| ||| |||| ||
Sbjct 88351 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCA 88292
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||| | ||||||||| || | || | || ||||| |||
Sbjct 88291 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 88232
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | |||||||||| ||| || ||||| | || || |||||
Sbjct 88231 ATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 88172
Query 44309 CCCGTGA 44315
|| ||||
Sbjct 88171 CCGGTGA 88165
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | ||| | || || ||||| || ||| |||||| |||||||||||
Sbjct 88660 TTGCATACCACCACGCAGACGCAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTA 88601
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|||| || ||| |||| || |||||||| || || ||||| | |||||||| ||
Sbjct 88600 GTCGGAAAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTC 88541
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
| ||| | || ||||| || |||||| ||| | | | |||||||| | ||
Sbjct 88540 CGGAGGGATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGA 88481
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGA 44315
|| || || | || || ||||| || ||||
Sbjct 88480 CTCGACTTCGAGGGTGATGGTCTTGCCGGTGA 88449
>seq363
Length=34683
Score = 87.8 bits (96), Expect = 1e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | || |||||||| || || |||||| ||||||||||| ||
Sbjct 5289 CATACCACCACGCAGGCGCAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 5348
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| |||| || |||||||| ||||| |||||||| |||||||| || |
Sbjct 5349 CGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGG 5408
Query 44227 AGGCACACCTTCCTTTTC 44244
|| | || ||||| ||
Sbjct 5409 GGGAATGCCCTCCTTGTC 5426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359984516519397
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |