Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq923 141 2e-28
seq670 134 3e-26
seq731 131 4e-25
>seq923
Length=2568
Score = 141 bits (156), Expect = 2e-28
Identities = 152/201 (76%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || || || ||||| |||||||| |||||||| ||| || ||
Sbjct 105 CAGATCTTCGTCAAGACCCTGACCGGAAAGACGATCACGCTCGAGGTCGAATCTTCGGAT 164
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| |||||||||||||| || || ||||| || ||||||||
Sbjct 165 ACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAG 224
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || |||||||| ||||| ||||| | | || || ||| ||
Sbjct 225 CGCTTGATCTTCGCAGGCAAGCAGCTCGAGGATGGCAGGACGTTGTCGGACTACAACATC 284
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || ||||||
Sbjct 285 CAGAAGGAGTCTACCCTGCAT 305
>seq670
Length=49272
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || || || || || || |||||||||||||| || ||| |||||||||
Sbjct 38588 TTCGTCAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 38529
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| |||||||| || || || || ||||||||||| || ||
Sbjct 38528 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTG 38469
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||||||||| || |||||||| || || | || || |||| || ||| |||| ||
Sbjct 38468 ATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAA 38410
>seq731
Length=88763
Score = 131 bits (144), Expect = 4e-25
Identities = 141/187 (75%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| || || || ||||||||||| || || || ||||||||||| ||||||||
Sbjct 88449 TCACCGGCAAGACCATCACCCTCGAAGTCGAGTCTTCGGACACCATCGACAACGTCAAGT 88508
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
||||| || ||||| || || ||||||||||||||||| || || |||||||| || |
Sbjct 88509 CGAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAGCAGCGCCTCATCTTCGCTGGCA 88568
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
| ||||| || || || | || ||| |||| || ||| |||| || || || || || |
Sbjct 88569 AGCAGCTTGAGGACGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCCACTCTCC 88628
Query 178123 ATCTTGT 178129
| || ||
Sbjct 88629 ACCTCGT 88635
Score = 125 bits (138), Expect = 2e-23
Identities = 140/187 (75%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| || || || |||||||| ||||| || ||| ||||||||||| || || ||
Sbjct 88165 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGT 88224
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
|||||||||||||| || || || || ||||||||||| || ||||||||||| || |
Sbjct 88225 CCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTTATCTTCGCTGGCA 88284
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
| ||||| || || || | || || |||| || ||| |||| || || || || || |
Sbjct 88285 AGCAGCTTGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACGCTCC 88344
Query 178123 ATCTTGT 178129
| || ||
Sbjct 88345 ACCTCGT 88351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203710518017154
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |