Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq923 141 2e-28 seq670 134 3e-26 seq731 131 4e-25 >seq923 Length=2568 Score = 141 bits (156), Expect = 2e-28 Identities = 152/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || ||||| |||||||| |||||||| ||| || || Sbjct 105 CAGATCTTCGTCAAGACCCTGACCGGAAAGACGATCACGCTCGAGGTCGAATCTTCGGAT 164 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| |||||||||||||| || || ||||| || |||||||| Sbjct 165 ACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAG 224 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || |||||||| ||||| ||||| | | || || ||| || Sbjct 225 CGCTTGATCTTCGCAGGCAAGCAGCTCGAGGATGGCAGGACGTTGTCGGACTACAACATC 284 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || || || |||||| Sbjct 285 CAGAAGGAGTCTACCCTGCAT 305 >seq670 Length=49272 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || || || || || || |||||||||||||| || ||| ||||||||| Sbjct 38588 TTCGTCAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 38529 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| |||||||| || || || || ||||||||||| || || Sbjct 38528 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTG 38469 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||||||||| || |||||||| || || | || || |||| || ||| |||| || Sbjct 38468 ATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAA 38410 >seq731 Length=88763 Score = 131 bits (144), Expect = 4e-25 Identities = 141/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || ||||||||||| || || || ||||||||||| |||||||| Sbjct 88449 TCACCGGCAAGACCATCACCCTCGAAGTCGAGTCTTCGGACACCATCGACAACGTCAAGT 88508 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| || ||||| || || ||||||||||||||||| || || |||||||| || | Sbjct 88509 CGAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAGCAGCGCCTCATCTTCGCTGGCA 88568 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || || || | || ||| |||| || ||| |||| || || || || || | Sbjct 88569 AGCAGCTTGAGGACGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCCACTCTCC 88628 Query 178123 ATCTTGT 178129 | || || Sbjct 88629 ACCTCGT 88635 Score = 125 bits (138), Expect = 2e-23 Identities = 140/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || |||||||| ||||| || ||| ||||||||||| || || || Sbjct 88165 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGT 88224 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||||||||||| || || || || ||||||||||| || ||||||||||| || | Sbjct 88225 CCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTTATCTTCGCTGGCA 88284 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || || || | || || |||| || ||| |||| || || || || || | Sbjct 88285 AGCAGCTTGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACGCTCC 88344 Query 178123 ATCTTGT 178129 | || || Sbjct 88345 ACCTCGT 88351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203710518017154