Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1666 141 2e-28
>seq1666
Length=59928
Score = 141 bits (156), Expect = 2e-28
Identities = 278/406 (68%), Gaps = 4/406 (1%)
Strand=Plus/Minus
Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296
||||||| ||||| ||| ||| |||||||||| || | || |||||| |||
Sbjct 55587 CCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCTGGTCTGACATTCTCCAACGAGCTCA 55528
Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAG 230355
|| |||||||||||| | || || | | || | | || | | || | || ||
Sbjct 55527 TCTCTCGCGACGAGGGCATGCA-CACCGACTTTGCCTGCCTGCTCTTCTCTCACATCAAG 55469
Query 230356 AACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAG 230415
|||| | |||| | || | | |||||| || || || || | || |
Sbjct 55468 TCGAAGCCGACCCCCGAGGCTGTTGAGAAGATCATTGTCGAGGCCGTCGAGATTGAGCAA 55409
Query 230416 GAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGG 230474
|||||| | ||||||| | || || || || | ||||||||||||| || ||| |
Sbjct 55408 GAGTTCCTGACTGACGCTCTCCCC-GTTGCTCTGCTCGGCATGAACGCTGGCCTCATGTG 55350
Query 230475 ACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTA 230534
|||||||| || || || || |||||| | | || || ||||| || |||| ||
Sbjct 55349 CCAGTACATTGAGTTTGTTGCTGACCGCCTGCTGGTGGCGCTTGGCAACAAGAAGCACTA 55290
Query 230535 CAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT 230594
|||||||| |||||||| | || |||||| ||||||||| | || |||||||||||
Sbjct 55289 CAACTCTACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACTT 55230
Query 230595 CTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAAG 230640
|||||| ||||| || |||||||||| | | | ||||| ||| ||
Sbjct 55229 CTTCGAGAAGCGCGTTGGTGACTATCAAAAGGCGGGTGTCATGGAG 55184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057746095229240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |