Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1666 141 2e-28 >seq1666 Length=59928 Score = 141 bits (156), Expect = 2e-28 Identities = 278/406 (68%), Gaps = 4/406 (1%) Strand=Plus/Minus Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296 ||||||| ||||| ||| ||| |||||||||| || | || |||||| ||| Sbjct 55587 CCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCTGGTCTGACATTCTCCAACGAGCTCA 55528 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAG 230355 || |||||||||||| | || || | | || | | || | | || | || || Sbjct 55527 TCTCTCGCGACGAGGGCATGCA-CACCGACTTTGCCTGCCTGCTCTTCTCTCACATCAAG 55469 Query 230356 AACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAG 230415 |||| | |||| | || | | |||||| || || || || | || | Sbjct 55468 TCGAAGCCGACCCCCGAGGCTGTTGAGAAGATCATTGTCGAGGCCGTCGAGATTGAGCAA 55409 Query 230416 GAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGG 230474 |||||| | ||||||| | || || || || | ||||||||||||| || ||| | Sbjct 55408 GAGTTCCTGACTGACGCTCTCCCC-GTTGCTCTGCTCGGCATGAACGCTGGCCTCATGTG 55350 Query 230475 ACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTA 230534 |||||||| || || || || |||||| | | || || ||||| || |||| || Sbjct 55349 CCAGTACATTGAGTTTGTTGCTGACCGCCTGCTGGTGGCGCTTGGCAACAAGAAGCACTA 55290 Query 230535 CAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT 230594 |||||||| |||||||| | || |||||| ||||||||| | || ||||||||||| Sbjct 55289 CAACTCTACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACTT 55230 Query 230595 CTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAAG 230640 |||||| ||||| || |||||||||| | | | ||||| ||| || Sbjct 55229 CTTCGAGAAGCGCGTTGGTGACTATCAAAAGGCGGGTGTCATGGAG 55184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057746095229240