Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 136 5e-27
>seq5249
Length=10599
Score = 136 bits (150), Expect = 5e-27
Identities = 466/722 (65%), Gaps = 6/722 (1%)
Strand=Plus/Minus
Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010
||||||||||| || | |||| | | | || || || | || ||||| | | |
Sbjct 7841 TCAAACTCGTCGCCGTAGACATCGGCGAGACCCGGGGCCTCGTGAGGGCACATGAGAGTC 7782
Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 54069
|| || |||| | || || || ||||| || |||||||||| ||| || || || ||
Sbjct 7781 CAATCGCCGTTTTGCTCGACACGCTTCATGAACAGATCAGGAACCCACAGGGCGTAGAAC 7722
Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129
|| || | | | || || ||||| ||||| || |||||||| | |
Sbjct 7721 AAG-TCGCGTGCGCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAAGGGGAA 7663
Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189
| || | ||||| || |||| ||| |||| | | | ||||| || ||||| || ||
Sbjct 7662 GACGTCGGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGGCGCTTGTTGCCACC 7603
Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249
||| || | ||| | ||||||||| || || || | | ||| ||||| | || |||||
Sbjct 7602 CTGGTCAACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATGGGAATCAGGCCGTTGGA 7543
Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGA 54307
| || ||||| || | || ||| ||| | | ||| || | |||| ||
Sbjct 7542 GGTGCCGTTGGTACCAGCAATGTAGGAGCCAGTTGAACGGATGCGGTGGACGTTGA--GA 7485
Query 54308 CCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 54367
|| || || || ||| | || || || | || || || | || || |||||||||
Sbjct 7484 CCGATTCCACCGGCCGTCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTAGATGCCC 7425
Query 54368 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 54427
|| || || || ||| |||||| | | || || | | ||| | ||
Sbjct 7424 TCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGGGGGTA 7365
Query 54428 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 54487
|| || || || ||||| ||||||||||| ||||| | |||| ||| | | ||||||
Sbjct 7364 CCAGCGTTGAACAAGGTGGGAGAAGCGTGGGTAAAGTACTTTTGAGACATCAAGTTGTAC 7305
Query 54488 GTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 54547
|| || || || || || | | || ||||| || ||||||||||| | ||||
Sbjct 7304 GTTTCAATGGCCTTTTCAATGTTCTCGCCGTGGATTCCAACAGCGACACGCATAATCATG 7245
Query 54548 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTT 54607
||||| |||||||| | | |||| | || |||||||| || | || | ||
Sbjct 7244 TGCTGTGGTCTTTCGGCAACCTTGCCATCGATGCGGAGCAAGTATGACCTCTCGAGCGTC 7185
Query 54608 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTA 54667
|| || ||||| || | ||| ||||| || ||||| | || | |||||||| | |
Sbjct 7184 TTGAAGCCAAAGTATTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGTTGAGCTCA 7125
Query 54668 TC 54669
||
Sbjct 7124 TC 7123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593678941103040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |