Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq382 174 2e-38 >seq382 Length=29631 Score = 174 bits (192), Expect = 2e-38 Identities = 286/402 (71%), Gaps = 14/402 (3%) Strand=Plus/Minus Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 ||||||||||| ||| | | |||||| |||||||||||||| ||||| ||||| Sbjct 28323 ACGTAGAACTGCGCAAAC-ATGTGGCACGGCGGCAGGGCCATCTTCTTGAGGTCGGCCGG 28265 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTG-ATCTCCCCTATCA 145987 |||||| ||| | | || || | || | || ||| | | | | || | || | Sbjct 28264 GTTCCACGCGCTCATGATGATGCGCCGG-TCGAAGGGCTTGTGGCGCAGCTTGTCGATGA 28206 Query 145988 GGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGG 146047 ||| |||||||| |||||||| ||| ||| || | | | |||| ||||| ||| Sbjct 28205 CGTCGGCCAGCTGGTCGACGCCCTGTCCCGTGTAGTCGGCGTGGCAGTCGACGTAGTCGG 28146 Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCC 146107 | || ||||||| ||||||||||||||| ||||| |||||||| || ||| | ||| | Sbjct 28145 CGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCCTCGCGGTGGC 28086 Query 146108 CCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCC 146167 |||| || | | | | ||||| |||| ||||||||| ||||||||||||||| |||| Sbjct 28085 CCAGTCCCACGCTGTCCAGGAACGCCCGCGACCCGTTGCCGTCCCAGATCTTGA-TCCCC 28027 Query 146168 TCG-CGGAGAGCTCATTGGA----GTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTC 146222 || | | ||| ||||| |||| || ||| |||||||||||||||||| | Sbjct 28026 GCGTCTGTCAGCGGCTTGGATGATGTCC-TG---CCCGAGATGAACCAGAGCAGCTCGGC 27971 Query 146223 GAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 || ||| | | | |||||| | |||||| || || || || Sbjct 27970 GATGACGGCGCGCAGGAAGACGCGCTTGGTTGTGAGGAGTGG 27929 Score = 129 bits (142), Expect = 7e-25 Identities = 142/188 (76%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 145659 GGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGT 145717 ||||||| | || ||||| ||| || | || || |||| ||||||||||||||||| Sbjct 28595 GGGGCTCGCGCTCGAGCTGCTGCTGAAGCGCGTCGACATGGTCGAGGTAGACGTGCGCGT 28536 Query 145718 CCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGG 145777 | |||| | ||| | | |||||| | ||| | || ||| || | ||||| || Sbjct 28535 CGCCCATGGTGTGCGTCAGCGAGCCGGGCACCAGGTCGCAGACGTGTGCCAGCATGTGGG 28476 Query 145778 TCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCT 145837 | ||||||| ||||||||| |||||||||||||| || || |||||||| | ||||||| Sbjct 28475 TGAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCGAGGCCCATGTCGCAGGAGCGCT 28416 Query 145838 GGTACAGC 145845 |||||||| Sbjct 28415 GGTACAGC 28408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590034402981920