Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq382 174 2e-38
>seq382
Length=29631
Score = 174 bits (192), Expect = 2e-38
Identities = 286/402 (71%), Gaps = 14/402 (3%)
Strand=Plus/Minus
Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928
||||||||||| ||| | | |||||| |||||||||||||| ||||| |||||
Sbjct 28323 ACGTAGAACTGCGCAAAC-ATGTGGCACGGCGGCAGGGCCATCTTCTTGAGGTCGGCCGG 28265
Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTG-ATCTCCCCTATCA 145987
|||||| ||| | | || || | || | || ||| | | | | || | || |
Sbjct 28264 GTTCCACGCGCTCATGATGATGCGCCGG-TCGAAGGGCTTGTGGCGCAGCTTGTCGATGA 28206
Query 145988 GGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGG 146047
||| |||||||| |||||||| ||| ||| || | | | |||| ||||| |||
Sbjct 28205 CGTCGGCCAGCTGGTCGACGCCCTGTCCCGTGTAGTCGGCGTGGCAGTCGACGTAGTCGG 28146
Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCC 146107
| || ||||||| ||||||||||||||| ||||| |||||||| || ||| | ||| |
Sbjct 28145 CGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCCTCGCGGTGGC 28086
Query 146108 CCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCC 146167
|||| || | | | | ||||| |||| ||||||||| ||||||||||||||| ||||
Sbjct 28085 CCAGTCCCACGCTGTCCAGGAACGCCCGCGACCCGTTGCCGTCCCAGATCTTGA-TCCCC 28027
Query 146168 TCG-CGGAGAGCTCATTGGA----GTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTC 146222
|| | | ||| ||||| |||| || ||| |||||||||||||||||| |
Sbjct 28026 GCGTCTGTCAGCGGCTTGGATGATGTCC-TG---CCCGAGATGAACCAGAGCAGCTCGGC 27971
Query 146223 GAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264
|| ||| | | | |||||| | |||||| || || || ||
Sbjct 27970 GATGACGGCGCGCAGGAAGACGCGCTTGGTTGTGAGGAGTGG 27929
Score = 129 bits (142), Expect = 7e-25
Identities = 142/188 (76%), Gaps = 1/188 (1%)
Strand=Plus/Minus
Query 145659 GGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGT 145717
||||||| | || ||||| ||| || | || || |||| |||||||||||||||||
Sbjct 28595 GGGGCTCGCGCTCGAGCTGCTGCTGAAGCGCGTCGACATGGTCGAGGTAGACGTGCGCGT 28536
Query 145718 CCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGG 145777
| |||| | ||| | | |||||| | ||| | || ||| || | ||||| ||
Sbjct 28535 CGCCCATGGTGTGCGTCAGCGAGCCGGGCACCAGGTCGCAGACGTGTGCCAGCATGTGGG 28476
Query 145778 TCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCT 145837
| ||||||| ||||||||| |||||||||||||| || || |||||||| | |||||||
Sbjct 28475 TGAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCGAGGCCCATGTCGCAGGAGCGCT 28416
Query 145838 GGTACAGC 145845
||||||||
Sbjct 28415 GGTACAGC 28408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590034402981920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |