Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq3589 131 1e-25 seq2177 84.2 2e-11 >seq3589 Length=6346 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| |||| |||||||||||| || ||||| ||||| ||| Sbjct 2984 CCACCGCGGAGACGGAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 3043 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || || | ||||| ||||| |||||||| |||| || | |||||||||| ||| Sbjct 3044 AACGTCCGGCCATCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGA 3103 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| || || | | ||| ||||| | |||| Sbjct 3104 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATCGTATCCGAAGACTCCACC 3163 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||| ||||||||||| || || ||||| || || ||||| Sbjct 3164 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3210 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| |||| || ||||||||||| ||||| ||||| |||| ||| | ||||| Sbjct 3227 AGCACCAAGTGCAGGGTTGACTCCTTTTGGATGTTGTAGTCTGCCAACGTTCTGCCGTCC 3286 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| ||||| ||| |||| || | |||||| || || | || |||||||| Sbjct 3287 TCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGATCGGGCGGGATACCCTCCTTGTCT 3346 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | | | | || || | ||| ||| | ||||||||| Sbjct 3347 TGGATCTTCGACTTGACGTTGTCAATCGTGTCTGACGACTCGACTTCAAGCGTAATGGTC 3406 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| || || ||||| || || ||||| Sbjct 3407 TTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 3438 >seq2177 Length=34801 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 20986 CCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAA 21045 |||| || ||||| ||||| | ||||| || ||||||| ||||| ||||| || | | Sbjct 6204 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 6145 Query 21046 TAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGC 21105 | || | |||||||||| ||| | ||| |||||||| |||||| || || | | Sbjct 6144 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 6085 Query 21106 CGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAA 21165 ||| || || || ||| || | ||| ||||||||||| || | || ||||| | Sbjct 6084 CGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 6025 Query 21166 A 21166 | Sbjct 6024 A 6024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422229619159568