Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq3724 129 1e-24
>seq3724
Length=31399
Score = 129 bits (142), Expect = 1e-24
Identities = 281/418 (67%), Gaps = 41/418 (10%)
Strand=Plus/Plus
Query 253999 ACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGG 254058
|||| || || |||||||| |||| || ||||| || ||||| ||||| || ||||| |
Sbjct 9489 ACCTCCCACACATGCTTTTCTACGGCCCACCCGGTACCGGCAAAACGTCGACGATCCTCG 9548
Query 254059 CGCTGGCCCGAACC--CTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAA 254116
| || || ||| | || | ||| | ||| | | || || |||||||| ||
Sbjct 9549 CACTCGC--GAAGCAACTTTATGGCCCAGATCTCATCAAATCACGAGTACTCGAGCTAAA 9606
Query 254117 CGCTTCTGACGAACGCGGG--TTGGACGTCGTCCGCGACAAGATCAA-GACTTT---CTC 254170
|| || ||||| ||||| || || |||| || || ||| |||| |||||| | |
Sbjct 9607 TGCCTCCGACGAGCGCGGCATTTCGA--TCGTGCGAGAAAAGGTCAAAGACTTTGCACGC 9664
Query 254171 CA--AGATGTCGATTTCGTC-----GTTCCAAC-----------CCGGC----------- 254201
|| || |||||| | || | | || || |||||
Sbjct 9665 CAGCAGCTGTCGAATCCGCCCGCGGGACCCTACGGCGAGGAATACCGGCGCAAGTACCCA 9724
Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261
|| ||||| |||||| ||||| ||||||| ||||| |||| |||||| || || |||
Sbjct 9725 TGCCCGCCGTTCAAGATCGTGGTCCTGGATGAGGCCGACAGCATGACACAGGATGCACAG 9784
Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321
||| || ||||| || ||||||||| || | | ||||| ||||| ||| | |||
Sbjct 9785 AGCGCGCTGCGCCGCACCATGGAGACGTACAGCCGCATCACGCGCTTTTGTCTGATTTGC 9844
Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
|||||||| || ||||| | ||||||||| || || ||| ||||||||| ||||
Sbjct 9845 AACTACGTCACGCGCATCATTGACCCGCTGGCGTCGCGCTGCAGCAAGTTTCGGTTCA 9902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073687321131264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |