Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3724 129 1e-24 >seq3724 Length=31399 Score = 129 bits (142), Expect = 1e-24 Identities = 281/418 (67%), Gaps = 41/418 (10%) Strand=Plus/Plus Query 253999 ACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGG 254058 |||| || || |||||||| |||| || ||||| || ||||| ||||| || ||||| | Sbjct 9489 ACCTCCCACACATGCTTTTCTACGGCCCACCCGGTACCGGCAAAACGTCGACGATCCTCG 9548 Query 254059 CGCTGGCCCGAACC--CTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAA 254116 | || || ||| | || | ||| | ||| | | || || |||||||| || Sbjct 9549 CACTCGC--GAAGCAACTTTATGGCCCAGATCTCATCAAATCACGAGTACTCGAGCTAAA 9606 Query 254117 CGCTTCTGACGAACGCGGG--TTGGACGTCGTCCGCGACAAGATCAA-GACTTT---CTC 254170 || || ||||| ||||| || || |||| || || ||| |||| |||||| | | Sbjct 9607 TGCCTCCGACGAGCGCGGCATTTCGA--TCGTGCGAGAAAAGGTCAAAGACTTTGCACGC 9664 Query 254171 CA--AGATGTCGATTTCGTC-----GTTCCAAC-----------CCGGC----------- 254201 || || |||||| | || | | || || ||||| Sbjct 9665 CAGCAGCTGTCGAATCCGCCCGCGGGACCCTACGGCGAGGAATACCGGCGCAAGTACCCA 9724 Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 || ||||| |||||| ||||| ||||||| ||||| |||| |||||| || || ||| Sbjct 9725 TGCCCGCCGTTCAAGATCGTGGTCCTGGATGAGGCCGACAGCATGACACAGGATGCACAG 9784 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321 ||| || ||||| || ||||||||| || | | ||||| ||||| ||| | ||| Sbjct 9785 AGCGCGCTGCGCCGCACCATGGAGACGTACAGCCGCATCACGCGCTTTTGTCTGATTTGC 9844 Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 |||||||| || ||||| | ||||||||| || || ||| ||||||||| |||| Sbjct 9845 AACTACGTCACGCGCATCATTGACCCGCTGGCGTCGCGCTGCAGCAAGTTTCGGTTCA 9902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073687321131264