Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 150 2e-31
>seq5249
Length=10599
Score = 150 bits (166), Expect = 2e-31
Identities = 440/676 (65%), Gaps = 4/676 (1%)
Strand=Plus/Minus
Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086
|| ||||| | | ||| || |||| | || || || ||||| || |||||||||| |
Sbjct 7796 GGGCACATGAGAGTCCAATCGCCGTTTTGCTCGACACGCTTCATGAACAGATCAGGAACC 7737
Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146
|| || || || || || | | | || || ||||| ||||| ||
Sbjct 7736 CACAGGGCGTAGAACAAGTCGCGTGCGCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGG 7677
Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206
|||||||| | | | || ||||| || |||| ||| ||||| | | | |||||
Sbjct 7676 TCGAGGAAGGGGAAGACGTCGGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGG 7617
Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266
|| ||||| || ||||| || | ||| | ||||||||| || || || | | ||| |||
Sbjct 7616 CGCTTGTTGCCACCCTGGTCAACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATGGGA 7557
Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTA 66326
|| | || ||||| || || ||||| || | || ||| ||| ||| ||| ||
Sbjct 7556 ATCAGGCCGTTGGAGGTGCCGTTGGTACCAGCAATGTAGGAGCCAGTTGAACGGATGCGG 7497
Query 66327 CTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 66384
| |||| |||| ||||| || ||| | || || || | || || || | |
Sbjct 7496 TGGACGTTGA--GACCGATTCCACCGGCCGTCTTGGAAATCATGGCACAAGTCTTGAGGG 7439
Query 66385 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 66444
| || ||||||||||| || || || ||| |||||| | | || || | | |
Sbjct 7438 TGTCGTAGATGCCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCT 7379
Query 66445 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 66504
|| | || || || || || ||||| ||||||||||| ||||| | |||| ||
Sbjct 7378 GGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGAGAAGCGTGGGTAAAGTACTTTTGAG 7319
Query 66505 AAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGA 66564
| | | |||||||| ||||| || || || | | || ||||| || ||||
Sbjct 7318 ACATCAAGTTGTACGTTTCAATGGCCTTTTCAATGTTCTCGCCGTGGATTCCAACAGCGA 7259
Query 66565 CACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGG 66624
||||||| | ||||||||| |||||||| | | |||| | || | |||||| |
Sbjct 7258 CACGCATAATCATGTGCTGTGGTCTTTCGGCAACCTTGCCATCGATGCGGAGCAAGTATG 7199
Query 66625 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAA 66684
| | || | || || || ||||| || | ||| ||||| || ||||| | ||
Sbjct 7198 ACCTCTCGAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCGCGGTCGTAGACGATGG 7139
Query 66685 CCGAGTTGAGTTTATC 66700
|||||||||| | |||
Sbjct 7138 CCGAGTTGAGCTCATC 7123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658125510284320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |