Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 172 8e-38
>seq5249
Length=10599
Score = 172 bits (190), Expect = 8e-38
Identities = 474/722 (66%), Gaps = 6/722 (1%)
Strand=Plus/Minus
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
|| |||||||| || | |||||| | | || || |||| ||| ||||| | | |
Sbjct 7841 TCAAACTCGTCGCCGTAGACATCGGCGAGACCCGGGGCCTCGTGAGGGCACATGAGAGTC 7782
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 79979
|| || || | | || || || ||||| || |||||||||| ||| || || || ||
Sbjct 7781 CAATCGCCGTTTTGCTCGACACGCTTCATGAACAGATCAGGAACCCACAGGGCGTAGAAC 7722
Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039
|| || | | | ||| || ||||| ||||| || |||||||| | |
Sbjct 7721 AAG-TCGCGTGCGCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAAGGGGAA 7663
Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099
| || | ||||| || |||| ||| ||||| | | | || || || ||||| || ||
Sbjct 7662 GACGTCGGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGGCGCTTGTTGCCACC 7603
Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159
||| || | ||| | ||||||||| || || || | | ||| ||||| | || |||||
Sbjct 7602 CTGGTCAACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATGGGAATCAGGCCGTTGGA 7543
Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGA 80217
|| || ||||| || | || ||| ||| | | ||| || | |||| ||
Sbjct 7542 GGTGCCGTTGGTACCAGCAATGTAGGAGCCAGTTGAACGGATGCGGTGGACGTTGA--GA 7485
Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 80277
|| ||||| || ||| | || || || | || || || | || || |||||||||
Sbjct 7484 CCGATTCCACCGGCCGTCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTAGATGCCC 7425
Query 80278 TCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 80337
|| ||||| || || |||||| | | || || | | ||| | ||
Sbjct 7424 TCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGGGGGTA 7365
Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 80397
|| || || || ||||| ||||||||||| ||||| | |||| ||||| | ||||||
Sbjct 7364 CCAGCGTTGAACAAGGTGGGAGAAGCGTGGGTAAAGTACTTTTGAGACATCAAGTTGTAC 7305
Query 80398 GTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATG 80457
|| ||||| || ||| || | | || ||||| || ||||||||||| | ||||
Sbjct 7304 GTTTCAATGGCCTTTTCAATGTTCTCGCCGTGGATTCCAACAGCGACACGCATAATCATG 7245
Query 80458 TGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTT 80517
||||| |||||||| | | |||| || || | |||||| || | || | ||
Sbjct 7244 TGCTGTGGTCTTTCGGCAACCTTGCCATCGATGCGGAGCAAGTATGACCTCTCGAGCGTC 7185
Query 80518 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 80577
|| || ||||| || | ||| ||||| || ||||| | || |||||||||| | |
Sbjct 7184 TTGAAGCCAAAGTATTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGTTGAGCTCA 7125
Query 80578 TC 80579
||
Sbjct 7124 TC 7123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718217192386720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |