Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5249 172 8e-38 >seq5249 Length=10599 Score = 172 bits (190), Expect = 8e-38 Identities = 474/722 (66%), Gaps = 6/722 (1%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || |||||||| || | |||||| | | || || |||| ||| ||||| | | | Sbjct 7841 TCAAACTCGTCGCCGTAGACATCGGCGAGACCCGGGGCCTCGTGAGGGCACATGAGAGTC 7782 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 79979 || || || | | || || || ||||| || |||||||||| ||| || || || || Sbjct 7781 CAATCGCCGTTTTGCTCGACACGCTTCATGAACAGATCAGGAACCCACAGGGCGTAGAAC 7722 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 || || | | | ||| || ||||| ||||| || |||||||| | | Sbjct 7721 AAG-TCGCGTGCGCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAAGGGGAA 7663 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 | || | ||||| || |||| ||| ||||| | | | || || || ||||| || || Sbjct 7662 GACGTCGGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGGCGCTTGTTGCCACC 7603 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 ||| || | ||| | ||||||||| || || || | | ||| ||||| | || ||||| Sbjct 7602 CTGGTCAACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATGGGAATCAGGCCGTTGGA 7543 Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGA 80217 || || ||||| || | || ||| ||| | | ||| || | |||| || Sbjct 7542 GGTGCCGTTGGTACCAGCAATGTAGGAGCCAGTTGAACGGATGCGGTGGACGTTGA--GA 7485 Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 80277 || ||||| || ||| | || || || | || || || | || || ||||||||| Sbjct 7484 CCGATTCCACCGGCCGTCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTAGATGCCC 7425 Query 80278 TCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 80337 || ||||| || || |||||| | | || || | | ||| | || Sbjct 7424 TCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGGGGGTA 7365 Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 80397 || || || || ||||| ||||||||||| ||||| | |||| ||||| | |||||| Sbjct 7364 CCAGCGTTGAACAAGGTGGGAGAAGCGTGGGTAAAGTACTTTTGAGACATCAAGTTGTAC 7305 Query 80398 GTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATG 80457 || ||||| || ||| || | | || ||||| || ||||||||||| | |||| Sbjct 7304 GTTTCAATGGCCTTTTCAATGTTCTCGCCGTGGATTCCAACAGCGACACGCATAATCATG 7245 Query 80458 TGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTT 80517 ||||| |||||||| | | |||| || || | |||||| || | || | || Sbjct 7244 TGCTGTGGTCTTTCGGCAACCTTGCCATCGATGCGGAGCAAGTATGACCTCTCGAGCGTC 7185 Query 80518 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 80577 || || ||||| || | ||| ||||| || ||||| | || |||||||||| | | Sbjct 7184 TTGAAGCCAAAGTATTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGTTGAGCTCA 7125 Query 80578 TC 80579 || Sbjct 7124 TC 7123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718217192386720