Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq5249 149 8e-31 >seq5249 Length=10599 Score = 149 bits (164), Expect = 8e-31 Identities = 422/644 (66%), Gaps = 6/644 (1%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATG 72080 || || ||||| || |||||||||| ||| || || || || || || | | | Sbjct 7763 ACACGCTTCATGAACAGATCAGGAACCCACAGGGCGTAGAACAAG-TCGCGTGCGCGGAC 7705 Query 72081 CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 72140 ||| || ||||| ||||| || |||||||| | | | || | ||||| || Sbjct 7704 CTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAAGGGGAAGACGTCGGCGTGCCAAGG 7645 Query 72141 TTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 72200 |||| ||| ||||| | | | || || || ||||| || ||||| || | ||| | ||| Sbjct 7644 CTCCAGGTAGATGGCAAAAGCACCAGGGCGCTTGTTGCCACCCTGGTCAACGTAGCGAGC 7585 Query 72201 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGA 72260 |||||| || || || | | ||| ||||| | || ||||| | || ||||| || | Sbjct 7584 GGTGTTGTTGTAGACACGGAGCATGGGAATCAGGCCGTTGGAGGTGCCGTTGGTACCAGC 7525 Query 72261 GATATAGCTTCCACTGGCACGAATATTGCTAA--TTGATAGACCTATTCCCCCTGCCATT 72318 || ||| ||| | | ||| || | | |||| |||| ||||| || ||| | Sbjct 7524 AATGTAGGAGCCAGTTGAACGGATGCGGTGGACGTTGA--GACCGATTCCACCGGCCGTC 7467 Query 72319 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATC 72378 || || || | || || || | || || ||||||||||| || || || ||| || Sbjct 7466 TTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTC 7407 Query 72379 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 72438 |||| | | || || | | ||| | || || || || || ||||| Sbjct 7406 ATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGGGGGTACCAGCGTTGAACAAGGTG 7347 Query 72439 GGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCT 72498 ||||||||||| ||||| | |||| ||||| | |||||||| ||||| || ||| Sbjct 7346 GGAGAAGCGTGGGTAAAGTACTTTTGAGACATCAAGTTGTACGTTTCAATGGCCTTTTCA 7287 Query 72499 ATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACG 72558 || | | || ||||| || ||||||||||| | ||| ||||| |||||||| | Sbjct 7286 ATGTTCTCGCCGTGGATTCCAACAGCGACACGCATAATCATGTGCTGTGGTCTTTCGGCA 7227 Query 72559 ATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 72618 | |||| || || | |||||| || | || | || || || ||||| || | | Sbjct 7226 ACCTTGCCATCGATGCGGAGCAAGTATGACCTCTCGAGCGTCTTGAAGCCAAAGTATTGG 7167 Query 72619 TATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATC 72662 || ||||| || ||||| | || |||| ||||| | ||| Sbjct 7166 TAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGTTGAGCTCATC 7123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671090978648480