Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1666 113 5e-20 seq3589 87.8 2e-12 >seq1666 Length=59928 Score = 113 bits (124), Expect = 5e-20 Identities = 166/231 (72%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 50632 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50691 || |||||||| || || ||||||| | || |||||| | ||||| || || | ||| Sbjct 55429 GAGGCCGTCGAGATTGAGCAAGAGTTCCTGACTGACGCTCTCCCCGTTGCTCTGCTCGGC 55370 Query 50692 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAG 50751 |||||||| | | | |||||| ||||||||||||||||||| ||| | || || || | Sbjct 55369 ATGAACGCTGGCCTCATGTGCCAGTACATTGAGTTTGTTGCTGACCGCCTGCTGGTGGCG 55310 Query 50752 CTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATATC 50810 || || |||| ||| |||| || | |||||||| || ||| | ||||| || Sbjct 55309 CTTGG-CAACAAGAAGCACTACAACTCTACCAACCCCTTCGACTTCATGGAGAACATTTC 55251 Query 50811 GTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATA-CAAAA 50860 | | | ||||| || ||||| ||||| | || || || || || ||||| Sbjct 55250 GCTCAACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTATCAAAA 55200 >seq3589 Length=6346 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || || || ||||| |||||||| || || || || ||| ||||| || || || Sbjct 3242 GTTGACTCCTTTTGGATGTTGTAGTCTGCCAACGTTCTGCCGTCCTCGAGCTGCTTGCCT 3301 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| | ||||| || ||||||||||| || || || || ||||| || || || Sbjct 3302 GCAAAAATCAGGCGCTGCTGATCGGGCGGGATACCCTCCTTGTCTTGGATCTTCGACTTG 3361 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | |||||| | | || ||||||| || | |||||||||||||| || Sbjct 3362 ACGTTGTCAATCGTGTCTGACGACTCGACTTCAAGCGTAATGGTCTTGCCGGTCAAAGTC 3421 Query 143168 TTTACGAATATTTGCATA 143185 || ||||| || |||||| Sbjct 3422 TTGACGAAGATCTGCATA 3439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506977971015360