Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 194 2e-44
seq1666 150 3e-31
>seq5249
Length=10599
Score = 194 bits (214), Expect = 2e-44
Identities = 364/530 (69%), Gaps = 4/530 (1%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| ||||||| | ||| ||||| | || |||||| | | ||||| | | ||
Sbjct 7531 ACCAACGGCACCTCCAACGGCCTGATTCCCATGCTCCGTGTCTACAACAACACCGCTCGC 7590
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
|||||| ||||| ||||| || || || || ||| | ||| ||||| |||| ||||||
Sbjct 7591 TACGTTGACCAGGGTGGCAACAAGCGCCCTGGTGCTTTTGCCATCTACCTGGAGCCTTGG 7650
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
||||| ||||| || ||| |||| | ||||| ||| || ||||||| ||
Sbjct 7651 CACGCCGACGTCTTCCCCTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGGTCCGC 7710
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046
|| | |||||||| || || || ||||| || ||| ||||||||||||| ||| | |
Sbjct 7711 GCACGCGACTTGTTCTACGCCCTGTGGGTTCCTGATCTGTTCATGAAGCGTGTCGAGCAA 7770
Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106
||| | |||| || |||||||| || | | || ||||| ||||| || |||
Sbjct 7771 AACGGCGATTGGACTCTCATGTGCCCTCACGAGGCCCCGGGTCTCGCCGATGTCTACGGC 7830
Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGT 97165
|| |||||||||| ||| | |||||| || ||||| |||||||| | |
Sbjct 7831 GACGAGTTTGAGGAGCTGTATGAGAGGTACGAGAGGGAAGGCCGTGGTCGTGAGACTA-T 7889
Query 97166 CGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
| || | |||| |||||| | ||||| || ||||||| ||||| || | || |
Sbjct 7890 CCGCGC-CCAGAAGCTGTGGTACGCCATTTTGGAGGCTCAGACCGAGACCGGCAACCCCT 7948
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284
||| ||||||||||| | || ||||| ||||||||| || |||| |||||
Sbjct 7949 TCATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAAAAGAACCTGGGTACCATTC 8008
Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334
||||||| |||||| || ||||| |||||| | | || ||||||
Sbjct 8009 GCAGCTCCAACCTGTGCTGTGAGATTGTCGAGTACACTGCCCCCGACGAG 8058
>seq1666
Length=59928
Score = 150 bits (166), Expect = 3e-31
Identities = 239/336 (71%), Gaps = 10/336 (3%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| ||||||| || ||||| | ||| ||| | ||||||
Sbjct 56096 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGATTGATCTG 56037
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || |||| ||| | | ||| ||| || ||||| || || ||
Sbjct 56036 TCCAAGGATCTCCACGACTGGAACAAGCGTCTGAACGACGACGAGCGCTTCTTCATCTCC 55977
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| || | ||||||||||||| || ||||| || |||||||| || || | ||
Sbjct 55976 CACGTTCTCGCCTTCTTTGCCGCGTCTGATGGCATTGTCAACGAGAACTTGGTCGAGCGC 55917
Query 125199 TTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256
||| ||| || || ||||| |||| ||| ||||| ||||| ||||| || ||||
Sbjct 55916 TTCAGCTC-CGAAGTGCAGATTCCCGAGG-CTCGCTGCTTCTACGGTTTCCAGATTATGA 55859
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-- 125314
| |||||| | |||||||| | ||||| |||| |||| |||||| |||| ||
Sbjct 55858 TGGAGAACATCCACTCGGAGACATACTCGCTCTTGATCGACACGTACATCAGCGAGCCCA 55799
Query 125315 -GCAACGTAAACACATGCTCTTTAACGCAATCGACA 125349
||| || || || ||||| ||||| || ||||
Sbjct 55798 AGCAGCGCAACTAC---CTCTTCAACGCCATTGACA 55766
Score = 129 bits (142), Expect = 9e-25
Identities = 292/431 (68%), Gaps = 25/431 (6%)
Strand=Plus/Minus
Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492
|| || || ||||| ||||| |||||||| || || ||| ||||||| ||||||
Sbjct 55633 GCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCGTCCATCTTCTGGCTC 55574
Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552
|||||||| || || ||||| || ||||| | |||||| | || ||||| ||||||
Sbjct 55573 AAGAAGCGTGGTCTGATGCCTGGTCTGACATTCTCCAACGAGCTCATCTCTCGCGACGAG 55514
Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTT---TCGCAACTA-TCTGCGTCCCGAGTG 125608
||| | ||| ||||||||| || || || || || | | || | ||||
Sbjct 55513 GGCATGCACACCGACTTTGCCTGCCTGCTCTTCTCTCACATCAAGTCGAAG--CCGACCC 55456
Query 125609 CAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGA 125668
| || | | ||| ||| | |||||| ||| ||||| ||| || |||||
Sbjct 55455 CCGAGGC--TGTTGAGAAG------ATCATTGT---CGAGGCCGTCGAGATTGAGCAAGA 55407
Query 125669 GTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAG-CTAATGTGCG 125727
||| || || || | || || || || | ||||||||| || | || ||||||
Sbjct 55406 GTTCCTGACTGACGCTCTCCCCGTTGCTCTGCTCGGCATGAAC-GCTGGCCTCATGTGCC 55348
Query 125728 AGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---TTT 125784
||||||| |||||||| || || || || ||| | | | ||||| ||||| |
Sbjct 55347 AGTACATTGAGTTTGTTGCTGACCGCCTGCTG---GTGGCGCTTGGCAACAAGAAGCACT 55291
Query 125785 ACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACT 125844
||||| | | || ||||| || |||||| | ||| || || | || ||||||||||
Sbjct 55290 ACAACTCTACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACT 55231
Query 125845 TTTTCGAGAAG 125855
| |||||||||
Sbjct 55230 TCTTCGAGAAG 55220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741005954896480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |