Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq3589 95.1 1e-14
>seq3589
Length=6346
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891
||||| ||||| || ||||||||||| || ||||| || |||| ||| || |||||||
Sbjct 3229 CACCAAGTGCAGGGTTGACTCCTTTTGGATGTTGTAGTCTGCCAACGTTCTGCCGTCCTC 3288
Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951
||||| || || ||| |||| || | ||||||||| || | ||||| |||||
Sbjct 3289 GAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGATCGGGCGGGATACCCTCCTTGTCTTG 3348
Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011
|| ||| || || | | | | || || | ||| ||| | |||||||| ||
Sbjct 3349 GATCTTCGACTTGACGTTGTCAATCGTGTCTGACGACTCGACTTCAAGCGTAATGGTCTT 3408
Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| || ||||| ||||| || || |||||
Sbjct 3409 GCCGGTCAAAGTCTTGACGAAGATCTGCAT 3438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414543757620712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |