Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3589 95.1 1e-14 >seq3589 Length=6346 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || |||||||| | ||| || || || || || ||||| Sbjct 3229 CACCAAGTGCAGGGTTGACTCCTTTTGGATGTTGTAGTCTGCCAACGTTCTGCCGTCCTC 3288 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || |||| || | | |||||||| || || ||||| || ||||| | Sbjct 3289 GAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGATCGGGCGGGATACCCTCCTTGTCTTG 3348 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || | ||||||| | | | ||||| | ||||| |||| ||| ||||| || Sbjct 3349 GATCTTCGACTTGACGTTGTCAATCGTGTCTGACGACTCGACTTCAAGCGTAATGGTCTT 3408 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||| || || ||||||||||| Sbjct 3409 GCCGGTCAAAGTCTTGACGAAGATCTGCAT 3438 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| ||| || ||||| || | ||| || ||| || || | |||||| Sbjct 3001 CACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAACGTCCGGCCATCCTC 3060 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | || || | | ||||| || || ||||| || || ||||| | Sbjct 3061 AAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 3120 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || | ||||||| | ||| || || | || || |||| ||| || || || Sbjct 3121 AATCTTGGACTTGACGTTGTCGATCGTATCCGAAGACTCCACCTCAAGCGTAATCGTCTT 3180 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | || || || ||||||||||| Sbjct 3181 GCCGGTCAAGGTCTTGACGAAGATCTGCAT 3210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448258990277280