Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 311 2e-79
>seq5249
Length=10599
Score = 311 bits (344), Expect = 2e-79
Identities = 1143/1776 (64%), Gaps = 33/1776 (2%)
Strand=Plus/Plus
Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459
|||||| | |||| || ||| | || ||| |||| | ||| ||| | || |||
Sbjct 7183 AAGACGCTCGAGAGGTCATACTTGCTCCGCATCGATGGCAAGGTTGCCGAAAGACCACAG 7242
Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519
|| ||| | |||||||| ||| |||| ||||| || | | |||| || ||||||
Sbjct 7243 CACATGATTATGCGTGTCGCTGTTGGAATCCACGGCGAGAACATTGAAAAGGCCATTGAA 7302
Query 363520 ACATATAAGCTTCTAAGTGCTCGT--GTA-TTCACGCACGCCACGCCAACAATGTACAAT 363576
|| || || ||| | || ||| ||| || || ||||| | || || ||| |||
Sbjct 7303 ACGTACAA-CTTG-ATGT-CTCAAAAGTACTTTACCCACGCTTCTCCCACCTTGTTCAAC 7359
Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCC 363636
||||| || | || || ||| | | || ||||| | | | |||||||| || |
Sbjct 7360 GCTGGTACCCCCAAGCCCCAGCTTGCATCATGCTTCTTGATCGACATGAAGGAGGACAGC 7419
Query 363637 ATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGA 363696
|||||||| |||| ||||| || |||| |||||| | |||||||||| || || |||
Sbjct 7420 ATCGAGGGCATCTACGACACCCTCAAGACTTGTGCCATGATTTCCAAGACGGCCGGTGGA 7479
Query 363697 ATTGGTGT-ATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACAGGGGG 363755
|| ||| | | || ||||| | ||| || | |||||| || || ||
Sbjct 7480 ATCGGTCTCAACG-TCCACCGCATCCGTTCAACTGGCTCCTACATTGCTGGTACCAACGG 7538
Query 363756 ATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGA 363815
||| || || ||| |||||||||| ||||| | |||| || || | ||||| ||
Sbjct 7539 CACCTCCAACGGCCTGATTCCCATGCTCCGTGTCTACAACAACACCGCTCGCTACGTTGA 7598
Query 363816 CCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGA 363875
||||||||| |||||| || || ||||| || || || |||||| || |||||
Sbjct 7599 CCAGGGTGGCAACAAGCGCCCTGGTGCTTTTGCCATCTACCTGGAGCCTTGGCACGCCGA 7658
Query 363876 TATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGA 363935
| || || || || ||||| || ||| ||||| || || | || ||||| ||
Sbjct 7659 CGTCTTCCCCTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGGTCCGCGCACGCGA 7718
Query 363936 TCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAA 363995
||||||| || || |||||| |||| | || |||||||| || ||| | |
Sbjct 7719 CTTGTTCTACGCCCTGTGGGTTCCTGATCTGTTCATGAAGCGTGTCGAGCAAAACGGCGA 7778
Query 363996 TTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTA 364055
|||| | ||| | ||||| ||||| || ||||| ||||||| | || ||||| |
Sbjct 7779 TTGGACTCTCATGTGCCCTCACGAGGCCCCGGGTCTCGCCGATGTCTACGGCGACGAGTT 7838
Query 364056 TGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC----TCGTAAGACAATTCCCG 364111
|| | || || || | ||| || ||||||| | | |||| |||| || | ||
Sbjct 7839 TGAGGAGCTGTATGAGAGGTACGA----GAGGGAAGGCCGTGGTCGTGAGACTATCCGCG 7894
Query 364112 CACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGT 364171
| |||||||| |||| ||||| |||| | |||| ||||| || | |||| |||
Sbjct 7895 CCCAGAAGCTGTGGTACGCCATTTTGGAGGCTCAGACCGAGACCGGCAACCCCTTCATGC 7954
Query 364172 TGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG- 364230
| ||||| || | |||||||||||| |||||| || |||| ||||| |||| ||||
Sbjct 7955 TCTACAAGGACGCTTGCAACCGCAAGAGCAACCAAAAGAACCTGGGTACCATTC-GCAGC 8013
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAAC 364290
|||||| || |||||| | || ||||| || ||||||||| ||| || || |||
Sbjct 8014 TCCAACCTGTGCTGTGAGATTGTCGAGTACACTGCCCCCGACGAGGTTGCTGTCTGCAAC 8073
Query 364291 CTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAG------ATGGTACTTTTGACCACCAG 364344
| || || | || ||||| | ||||| | | ||||| | || | ||
Sbjct 8074 TTGGCCTCCCTGGCCCTTCCCACCTTTGTCGATGTCGAGAATGGTGTCTACAACTTCAAG 8133
Query 364345 CATCTTTATGACGTAACCTATCATGCTACTTG----CAATCTCGACAAGGTTATCGACAA 364400
| || | || || ||| | | | |||| || || ||||| | |||||||
Sbjct 8134 AAGCTGCACGAGGTCACCCA----GGTCCTTGTCAAGAACCTGAACAAGATCATCGACAT 8189
Query 364401 GAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCT 364460
||| | || || |||| || ||| | || ||||| || |||||||||| | |
Sbjct 8190 CAATCACTACCCCGTTCCCGAGGCCAGGAAGAGCAACATGCGCCACCGCCCGATTGCTGT 8249
Query 364461 TGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGA 364520
||||| | ||||| || || | ||| | ||| ||||| || || || || ||
Sbjct 8250 CGGTGTCAACGGCCTTGCCGATGCTTTCCTCGCCCTCCGCATGGCTTTCGACTCTCCCGA 8309
Query 364521 CGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTC 364580
|| | || || | |||| || || || || || | || ||||||| ||
Sbjct 8310 GGCCAGGCAGCTTAACATTCAGATTTTCGAGACCATCTA-CACGGTGCCCTGACTGCCTC 8368
Query 364581 GTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCA 364640
| ||| |||| || | | ||| ||||| | || || || || || || ||
Sbjct 8369 GATTGAGCTGGCTAAGAAGGATGGAGCTTACTCGTCGTACGAAGGTTCGCCGGCCTCTCA 8428
Query 364641 GGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATAC 364700
||| | || || | || | ||||| ||||| | | || ||| ||||||| |
Sbjct 8429 GGGCATCTTGCAATACGACATGTGGAACAAGACGCCCACAGACCTCTGGGACTGGGAGGC 8488
Query 364701 GCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCC 364760
|| | | || || || |||||| | | || || ||||||||
Sbjct 8489 TCTCAAGGGCGAGATTGCTCTACACGGCGTGCGCAACAGCTTGCTTGTTGCTCCCATGCC 8548
Query 364761 CACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAA 364820
|| || || ||| || ||||| || ||||||||| || || || | || |||
Sbjct 8549 TACTGCCTCGACTAGCCAAATCCTTGGCTTCAACGAGTGTTTTGAGCCCTACACCTCCAA 8608
Query 364821 TCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAA 364880
|||| || || || || || | || || || | || || || | | | ||
Sbjct 8609 CATTTACTCGCGTCGTGTGCTCGCTGGTGAGTTCCAAGTTGTCAACCCATGGTTGCTTAA 8668
Query 364881 GGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAA 364940
||| ||| |||| || |||||| |||| |||||||||| |||||||| | ||
Sbjct 8669 GGACCTTGTCGACATGGGTCTGTGGTCGGACAACATGAAGAACCGCATCATCGCGTCCAA 8728
Query 364941 TGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGT 365000
||| ||| | || | ||||| | || || || | ||| | | ||||| || ||
Sbjct 8729 TGGCTCTATTCAACAAATTCCCAACATCCCCGACGACATCAAGGCCCTCTACAAGACTGT 8788
Query 365001 ATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTG 365060
||||| ||||| ||| | || | | ||||| ||||| || ||||| ||||||
Sbjct 8789 GTGGGAGATTTCTCAGCGCAACATCGTCCAGATGGCTGCCGACCGTGGTGCCTTTATCGA 8848
Query 365061 TCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCAT 365120
||| || ||| | ||| | ||||| |||| || | |||| | || |||||
Sbjct 8849 CCAGTCTCAATCGCTCAACATCCACATGAAGGAGCCTACGATGGGCAAGATCACTTCCAT 8908
Query 365121 GCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
||| || || ||||| ||||| ||||| ||
Sbjct 8909 GCACTTTGCTGGCTGGAAGCTTGGTCTGAAGACGGG 8944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303257612894936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |