Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5249 311 2e-79 >seq5249 Length=10599 Score = 311 bits (344), Expect = 2e-79 Identities = 1143/1776 (64%), Gaps = 33/1776 (2%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 |||||| | |||| || ||| | || ||| |||| | ||| ||| | || ||| Sbjct 7183 AAGACGCTCGAGAGGTCATACTTGCTCCGCATCGATGGCAAGGTTGCCGAAAGACCACAG 7242 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519 || ||| | |||||||| ||| |||| ||||| || | | |||| || |||||| Sbjct 7243 CACATGATTATGCGTGTCGCTGTTGGAATCCACGGCGAGAACATTGAAAAGGCCATTGAA 7302 Query 363520 ACATATAAGCTTCTAAGTGCTCGT--GTA-TTCACGCACGCCACGCCAACAATGTACAAT 363576 || || || ||| | || ||| ||| || || ||||| | || || ||| ||| Sbjct 7303 ACGTACAA-CTTG-ATGT-CTCAAAAGTACTTTACCCACGCTTCTCCCACCTTGTTCAAC 7359 Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCC 363636 ||||| || | || || ||| | | || ||||| | | | |||||||| || | Sbjct 7360 GCTGGTACCCCCAAGCCCCAGCTTGCATCATGCTTCTTGATCGACATGAAGGAGGACAGC 7419 Query 363637 ATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGA 363696 |||||||| |||| ||||| || |||| |||||| | |||||||||| || || ||| Sbjct 7420 ATCGAGGGCATCTACGACACCCTCAAGACTTGTGCCATGATTTCCAAGACGGCCGGTGGA 7479 Query 363697 ATTGGTGT-ATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACAGGGGG 363755 || ||| | | || ||||| | ||| || | |||||| || || || Sbjct 7480 ATCGGTCTCAACG-TCCACCGCATCCGTTCAACTGGCTCCTACATTGCTGGTACCAACGG 7538 Query 363756 ATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGA 363815 ||| || || ||| |||||||||| ||||| | |||| || || | ||||| || Sbjct 7539 CACCTCCAACGGCCTGATTCCCATGCTCCGTGTCTACAACAACACCGCTCGCTACGTTGA 7598 Query 363816 CCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGA 363875 ||||||||| |||||| || || ||||| || || || |||||| || ||||| Sbjct 7599 CCAGGGTGGCAACAAGCGCCCTGGTGCTTTTGCCATCTACCTGGAGCCTTGGCACGCCGA 7658 Query 363876 TATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGA 363935 | || || || || ||||| || ||| ||||| || || | || ||||| || Sbjct 7659 CGTCTTCCCCTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGGTCCGCGCACGCGA 7718 Query 363936 TCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAA 363995 ||||||| || || |||||| |||| | || |||||||| || ||| | | Sbjct 7719 CTTGTTCTACGCCCTGTGGGTTCCTGATCTGTTCATGAAGCGTGTCGAGCAAAACGGCGA 7778 Query 363996 TTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTA 364055 |||| | ||| | ||||| ||||| || ||||| ||||||| | || ||||| | Sbjct 7779 TTGGACTCTCATGTGCCCTCACGAGGCCCCGGGTCTCGCCGATGTCTACGGCGACGAGTT 7838 Query 364056 TGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC----TCGTAAGACAATTCCCG 364111 || | || || || | ||| || ||||||| | | |||| |||| || | || Sbjct 7839 TGAGGAGCTGTATGAGAGGTACGA----GAGGGAAGGCCGTGGTCGTGAGACTATCCGCG 7894 Query 364112 CACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGT 364171 | |||||||| |||| ||||| |||| | |||| ||||| || | |||| ||| Sbjct 7895 CCCAGAAGCTGTGGTACGCCATTTTGGAGGCTCAGACCGAGACCGGCAACCCCTTCATGC 7954 Query 364172 TGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG- 364230 | ||||| || | |||||||||||| |||||| || |||| ||||| |||| |||| Sbjct 7955 TCTACAAGGACGCTTGCAACCGCAAGAGCAACCAAAAGAACCTGGGTACCATTC-GCAGC 8013 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAAC 364290 |||||| || |||||| | || ||||| || ||||||||| ||| || || ||| Sbjct 8014 TCCAACCTGTGCTGTGAGATTGTCGAGTACACTGCCCCCGACGAGGTTGCTGTCTGCAAC 8073 Query 364291 CTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAG------ATGGTACTTTTGACCACCAG 364344 | || || | || ||||| | ||||| | | ||||| | || | || Sbjct 8074 TTGGCCTCCCTGGCCCTTCCCACCTTTGTCGATGTCGAGAATGGTGTCTACAACTTCAAG 8133 Query 364345 CATCTTTATGACGTAACCTATCATGCTACTTG----CAATCTCGACAAGGTTATCGACAA 364400 | || | || || ||| | | | |||| || || ||||| | ||||||| Sbjct 8134 AAGCTGCACGAGGTCACCCA----GGTCCTTGTCAAGAACCTGAACAAGATCATCGACAT 8189 Query 364401 GAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCT 364460 ||| | || || |||| || ||| | || ||||| || |||||||||| | | Sbjct 8190 CAATCACTACCCCGTTCCCGAGGCCAGGAAGAGCAACATGCGCCACCGCCCGATTGCTGT 8249 Query 364461 TGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGA 364520 ||||| | ||||| || || | ||| | ||| ||||| || || || || || Sbjct 8250 CGGTGTCAACGGCCTTGCCGATGCTTTCCTCGCCCTCCGCATGGCTTTCGACTCTCCCGA 8309 Query 364521 CGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTC 364580 || | || || | |||| || || || || || | || ||||||| || Sbjct 8310 GGCCAGGCAGCTTAACATTCAGATTTTCGAGACCATCTA-CACGGTGCCCTGACTGCCTC 8368 Query 364581 GTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCA 364640 | ||| |||| || | | ||| ||||| | || || || || || || || Sbjct 8369 GATTGAGCTGGCTAAGAAGGATGGAGCTTACTCGTCGTACGAAGGTTCGCCGGCCTCTCA 8428 Query 364641 GGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATAC 364700 ||| | || || | || | ||||| ||||| | | || ||| ||||||| | Sbjct 8429 GGGCATCTTGCAATACGACATGTGGAACAAGACGCCCACAGACCTCTGGGACTGGGAGGC 8488 Query 364701 GCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCC 364760 || | | || || || |||||| | | || || |||||||| Sbjct 8489 TCTCAAGGGCGAGATTGCTCTACACGGCGTGCGCAACAGCTTGCTTGTTGCTCCCATGCC 8548 Query 364761 CACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAA 364820 || || || ||| || ||||| || ||||||||| || || || | || ||| Sbjct 8549 TACTGCCTCGACTAGCCAAATCCTTGGCTTCAACGAGTGTTTTGAGCCCTACACCTCCAA 8608 Query 364821 TCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAA 364880 |||| || || || || || | || || || | || || || | | | || Sbjct 8609 CATTTACTCGCGTCGTGTGCTCGCTGGTGAGTTCCAAGTTGTCAACCCATGGTTGCTTAA 8668 Query 364881 GGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAA 364940 ||| ||| |||| || |||||| |||| |||||||||| |||||||| | || Sbjct 8669 GGACCTTGTCGACATGGGTCTGTGGTCGGACAACATGAAGAACCGCATCATCGCGTCCAA 8728 Query 364941 TGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGT 365000 ||| ||| | || | ||||| | || || || | ||| | | ||||| || || Sbjct 8729 TGGCTCTATTCAACAAATTCCCAACATCCCCGACGACATCAAGGCCCTCTACAAGACTGT 8788 Query 365001 ATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTG 365060 ||||| ||||| ||| | || | | ||||| ||||| || ||||| |||||| Sbjct 8789 GTGGGAGATTTCTCAGCGCAACATCGTCCAGATGGCTGCCGACCGTGGTGCCTTTATCGA 8848 Query 365061 TCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCAT 365120 ||| || ||| | ||| | ||||| |||| || | |||| | || ||||| Sbjct 8849 CCAGTCTCAATCGCTCAACATCCACATGAAGGAGCCTACGATGGGCAAGATCACTTCCAT 8908 Query 365121 GCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 ||| || || ||||| ||||| ||||| || Sbjct 8909 GCACTTTGCTGGCTGGAAGCTTGGTCTGAAGACGGG 8944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303257612894936