Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq5249 93.3 4e-14 seq3589 84.2 2e-11 >seq5249 Length=10599 Score = 93.3 bits (102), Expect = 4e-14 Identities = 178/260 (68%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 133367 ACGTTAAGGCCTATACCGCCT-CCGTGTTTAGATATCATGGCACAATCGTTGAGAGTTTT 133425 ||||| || || || || || |||| || || |||||||||||| ||||| || | Sbjct 7493 ACGTTGAGACCGATTCCACCGGCCGTCTTG-GAAATCATGGCACAAGTCTTGAGGGTGTC 7435 Query 133426 ATAGATGCCATTGATGCTGTCTTCCTGGATGTTGAGCAAATAACACGACGACATCTGAGG 133485 |||||||| | ||||||||| |||| |||| || ||| | || || | | ||| || Sbjct 7434 GTAGATGCCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGG 7375 Query 133486 CATTTTCATGCCAGAAGAAAACAAAGTGGGACTAGCGTGAGTAAACAGCTTTGATCGCAT 133545 | | | |||| ||||| |||||| |||||| ||||| |||| ||| Sbjct 7374 CTTGGGGGTACCAGCGTTGAACAAGGTGGGAGAAGCGTGGGTAAAGTACTTTTGAGACAT 7315 Query 133546 CAATCTGTAGGACTCAATTGCGCTTTCAATGTCTTCACCATGAATTTGTAGCGCTACACG 133605 ||| |||| | ||||| || ||||||||| || || || ||| | || ||||| Sbjct 7314 CAAGTTGTACGTTTCAATGGCCTTTTCAATGTTCTCGCCGTGGATTCCAACAGCGACACG 7255 Query 133606 CATCAGCATATGTTGAGGTC 133625 ||| | ||| || || |||| Sbjct 7254 CATAATCATGTGCTGTGGTC 7235 >seq3589 Length=6346 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 ||||| || | || ||| |||||||||| | |||||||||||| | ||||| Sbjct 3642 ACTGGCAAGACCATCACCCTCGAAGTCGAATCGTCCGACACCATCGACAATGTCAAGTCC 3583 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 |||||| || || || ||||| || || || || ||| | |||| | || ||||||| Sbjct 3582 AAGATTCAGGATAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTCGCCGGCAAG 3523 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 |||||||| || | | | | | ||| || |||||||| || ||||| || | || Sbjct 3522 CAACTCGAGGACGGTCGCACCCTTGCCGACTACAACATTCAGAAGGAATCCACCCTCCAC 3463 Query 24195 TTAGTG 24200 || ||| Sbjct 3462 TTGGTG 3457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429905881370940