Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 154 2e-32
>seq5249
Length=10599
Score = 154 bits (170), Expect = 2e-32
Identities = 470/722 (65%), Gaps = 6/722 (1%)
Strand=Plus/Minus
Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052
|| |||||||| || | |||| | | || || || || | || ||||| | | |
Sbjct 7841 TCAAACTCGTCGCCGTAGACATCGGCGAGACCCGGGGCCTCGTGAGGGCACATGAGAGTC 7782
Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 63111
|| || |||| | || || || ||||| || |||||||||| ||| || || || ||
Sbjct 7781 CAATCGCCGTTTTGCTCGACACGCTTCATGAACAGATCAGGAACCCACAGGGCGTAGAAC 7722
Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171
|| || | | | || || ||||| ||||| || |||||||| | |
Sbjct 7721 AAG-TCGCGTGCGCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAAGGGGAA 7663
Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231
| || | ||||| || |||| ||| ||||| | | | ||||| || ||||| || ||
Sbjct 7662 GACGTCGGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGGCGCTTGTTGCCACC 7603
Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291
||| || | ||| | ||||||||| || || || | | ||| ||||| | || |||||
Sbjct 7602 CTGGTCAACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATGGGAATCAGGCCGTTGGA 7543
Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGA 63349
|| || ||||| || | || ||| ||| | | ||| || | |||| ||
Sbjct 7542 GGTGCCGTTGGTACCAGCAATGTAGGAGCCAGTTGAACGGATGCGGTGGACGTTGA--GA 7485
Query 63350 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 63409
|| ||||| || ||| | || || || | || || || | || || |||||||||
Sbjct 7484 CCGATTCCACCGGCCGTCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTAGATGCCC 7425
Query 63410 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63469
|| || || || ||| |||||| | | || || | | ||| | ||
Sbjct 7424 TCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGGGGGTA 7365
Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTAC 63529
|| || || || ||||| ||||||||||| ||||| | |||| ||| | | ||||||
Sbjct 7364 CCAGCGTTGAACAAGGTGGGAGAAGCGTGGGTAAAGTACTTTTGAGACATCAAGTTGTAC 7305
Query 63530 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63589
|| ||||| || || || | | || ||||| || ||||||||||| | ||||
Sbjct 7304 GTTTCAATGGCCTTTTCAATGTTCTCGCCGTGGATTCCAACAGCGACACGCATAATCATG 7245
Query 63590 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63649
||||| |||||||| | | |||| | || | |||||| || | || | ||
Sbjct 7244 TGCTGTGGTCTTTCGGCAACCTTGCCATCGATGCGGAGCAAGTATGACCTCTCGAGCGTC 7185
Query 63650 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 63709
|| || ||||| || | ||| ||||| || ||||| | || |||||||||| | |
Sbjct 7184 TTGAAGCCAAAGTATTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGTTGAGCTCA 7125
Query 63710 TC 63711
||
Sbjct 7124 TC 7123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633586473540800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |