Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1666 100 3e-16 >seq1666 Length=59928 Score = 100 bits (110), Expect = 3e-16 Identities = 222/330 (67%), Gaps = 5/330 (2%) Strand=Plus/Plus Query 93320 TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379 || || ||||| || ||||| | |||| | | || | ||||| || ||||| || Sbjct 55768 TCAATGGCGTTGAAGAGGTAGTTGCGCTGCTTGGGCTCGCTGATGTACGTGTCGATCAAG 55827 Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439 || || || | || || |||| |||||||| ||| ||||| |||||||| || | | Sbjct 55828 AGCGAGTATGTCTCCGAGTGGATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGA 55887 Query 93440 GCTTCCGTGATCTGCACTTCTTGAG-AAAATCTCTCTACGAGATTTTCATTGACTATACC 93498 || || | ||||||||||| ||| || | ||| || | || || ||||| || || Sbjct 55888 GCCTCGGGAATCTGCACTTC-GGAGCTGAAGCGCTCGACCAAGTTCTCGTTGACAATGCC 55946 Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT--- 93555 ||| || || ||||| || || | | || || || ||| || || || Sbjct 55947 ATCAGACGCGGCAAAGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTCAG 56006 Query 93556 AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615 | |||| | ||| ||| ||||| || || ||||| | || ||| | ||||| ||||| Sbjct 56007 ACGCTTGTTCCAGTCGTGGAGATCCTTGGACAGATCAATCTCCTCGGCGGTCCAGAACGA 56066 Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATAT 93645 || || || || |||||||| | ||| || Sbjct 56067 GGCCTCGGCCTTCTTGTACATTTGCCAGAT 56096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556820789551520