Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1666 100 3e-16
>seq1666
Length=59928
Score = 100 bits (110), Expect = 3e-16
Identities = 222/330 (67%), Gaps = 5/330 (2%)
Strand=Plus/Plus
Query 93320 TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379
|| || ||||| || ||||| | |||| | | || | ||||| || ||||| ||
Sbjct 55768 TCAATGGCGTTGAAGAGGTAGTTGCGCTGCTTGGGCTCGCTGATGTACGTGTCGATCAAG 55827
Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439
|| || || | || || |||| |||||||| ||| ||||| |||||||| || | |
Sbjct 55828 AGCGAGTATGTCTCCGAGTGGATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGA 55887
Query 93440 GCTTCCGTGATCTGCACTTCTTGAG-AAAATCTCTCTACGAGATTTTCATTGACTATACC 93498
|| || | ||||||||||| ||| || | ||| || | || || ||||| || ||
Sbjct 55888 GCCTCGGGAATCTGCACTTC-GGAGCTGAAGCGCTCGACCAAGTTCTCGTTGACAATGCC 55946
Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT--- 93555
||| || || ||||| || || | | || || || ||| || || ||
Sbjct 55947 ATCAGACGCGGCAAAGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTCAG 56006
Query 93556 AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615
| |||| | ||| ||| ||||| || || ||||| | || ||| | ||||| |||||
Sbjct 56007 ACGCTTGTTCCAGTCGTGGAGATCCTTGGACAGATCAATCTCCTCGGCGGTCCAGAACGA 56066
Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATAT 93645
|| || || || |||||||| | ||| ||
Sbjct 56067 GGCCTCGGCCTTCTTGTACATTTGCCAGAT 56096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556820789551520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |