Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3589 105 6e-18 seq2177 93.3 4e-14 seq2758 84.2 2e-11 >seq3589 Length=6346 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || ||||| || ||| | || ||||| ||||| | | Sbjct 3210 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAGGTGGAGTCTTCG 3151 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | |||| || ||||| ||||||||||| ||||| || || || Sbjct 3150 GATACGATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 3091 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | |||||| ||| || | |||| |||||| Sbjct 3090 CAGCGCCTGATTTTCGCGGGCAAGCAGCTTGAGGATGGCCGGACGTTGGCCGACTACAAC 3031 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| | || || || | || | ||||| ||| Sbjct 3030 ATCCAGAAGGAGTCCACTCTGCACTTGGTGCTCCGTCTCCGCGGTGGT 2983 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||||| ||||| || || | || |||||||| || | | Sbjct 3438 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATTACGCTTGAAGTCGAGTCGTCA 3379 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || || ||||||||||||||||| || |||||||| Sbjct 3378 GACACGATTGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGTATCCCGCCCGATCAG 3319 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| ||| | ||||| | | || | | || |||||| Sbjct 3318 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGACGGCAGAACGTTGGCAGACTACAAC 3259 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || ||||| || || ||| | || || || Sbjct 3258 ATCCAAAAGGAGTCAACCCTGCACTTGGT 3230 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || ||||| ||| | |||| ||| | ||| || |||| Sbjct 3642 ACTGGCAAGACCATCACCCTCGAAGTCGAATCGTCCGACACCATCGACAATGTCAAGTCC 3583 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| || |||||||| || || || || || || || | || || |||||||| Sbjct 3582 AAGATTCAGGATAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTCGCCGGCAAG 3523 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || | ||||| |||||| | |||| ||||||||||| || ||||||||| | || Sbjct 3522 CAACTCGAGGACGGTCGCACCCTTGCCGACTACAACATTCAGAAGGAATCCACCCTCCAC 3463 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || || | || | ||||| ||| Sbjct 3462 TTGGTGCTCCGTCTCCGCGGTGGT 3439 Score = 93.3 bits (102), Expect = 4e-14 Identities = 125/173 (72%), Gaps = 1/173 (1%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || || |||| ||| | ||| | |||| Sbjct 3920 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAACGTCAAGTCC 3861 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || || || || || ||||| || || || ||||| Sbjct 3860 AAGATCCAGGACAAGGAGGGCATCCCCCCTGA-CAGCAGCGTCTCATCTTCGCTGGCAAG 3802 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| ||||||| || |||| |||||||| || || || || || Sbjct 3801 CAGCTTGAGGATGGCCGCACCCTCGCCGACTACAACATCCAGAAGGAGTCGAC 3749 >seq2177 Length=34801 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || || || || | || ||| | ||| || |||| Sbjct 6039 ACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGACAATGTCAAGTCC 6098 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| || || || || || || || || |||||||| Sbjct 6099 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATCTTCGCCGGCAAG 6158 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||| | ||||| ||||||| ||||||| |||||||| || || Sbjct 6159 CAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAA 6202 >seq2758 Length=2532 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||| || || ||||| || || || || || || |||||||| ||| | || Sbjct 1555 AGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 1614 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 ||| |||||| | ||||| |||||||| || || || || || | || | || | Sbjct 1615 GGACGGCCGCACGCTGTCCGACTACAACATCCAGAAGGAGTCGACGCTCCACCTGGTGCT 1674 Query 22431 GCGATTGCGCGGAGGT 22446 ||| ||||||| ||| Sbjct 1675 GCGCCTGCGCGGCGGT 1690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419698596479620