Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq3589 84.2 2e-11
>seq3589
Length=6346
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/206 (69%), Gaps = 1/206 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||||||||| || | | || | || | ||| || || || || |||||||| |||
Sbjct 3716 ATACCGCCACGCAGGCGAAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCG 3775
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || ||| ||||| || || |||||| ||||||||||||| | ||| ||
Sbjct 3776 GCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCT-GTCAGGG 3834
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || ||||| ||||| || | | || | |||||||| ||| |||
Sbjct 3835 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCG 3894
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGT 114358
|| || | ||| | || ||||| ||
Sbjct 3895 ACCTCAAGGGTGATGGTCTTGCCAGT 3920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420104968009776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |