Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq1666 284 2e-71
seq5249 277 3e-69
>seq1666
Length=59928
Score = 284 bits (314), Expect = 2e-71
Identities = 604/901 (67%), Gaps = 63/901 (7%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| ||||||||||||||||||||| |||
Sbjct 56096 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGATTGATCTG 56037
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAA 42415
||||||| || |||| | | |||||| |||| || || ||| ||
Sbjct 56036 TCCAAGGATCTCCACGACTGGAACAAGC-GTCTGAACGACGACGAGCGCTTCTTCATCTC 55978
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|| | || |||||||| ||||| ||||| ||||| ||||| |||||| ||| | |
Sbjct 55977 CCACGTTCTCGCCTTCTTTGCCGCGTCTGATGGCATTGTCAACGAGAACTTGGTCGAGCG 55918
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| || |||||| ||||| |||||||||||||| |||||||| ||
Sbjct 55917 CTTCAGCTCCGAAGTGCAGATTCCCGAGGCTCGCTGCTTCTACGGTTTCCAGATTATGAT 55858
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595
|||||| | ||||| ||| ||| | || || ||||||||||| || |||
Sbjct 55857 GGAGAACATCCACTCGGAGACATACTCGCTCTTGATCGACACGTACATCAGCGAGCCCAA 55798
Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGA------CG----ATGC------------ 42633
|||| ||| || ||||| ||||| || | || ||||
Sbjct 55797 GCAGCGCAACTACCTCTTCAACGCCATTGACAATAGTACGTGACATGCACGTAGCGCTCT 55738
Query 42634 ---------------------------CCTGCATCAAGAAGAAGGCGGACTGGGCGCTCA 42666
||||||||||||||||||| |||||||| ||
Sbjct 55737 ACCCGTCTTGCTGACGCGTCATAGTTCCCTGCATCAAGAAGAAGGCCGACTGGGCTCTGC 55678
Query 42667 ACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTC 42725
||||||| | | | || | | || || | | | || | |||||| | ||||||
Sbjct 55677 GCTGGATCT-GCGACAAGAACTCGACCTTTGCATCGCGTCTCATCGCCTTTGCTGCCGTC 55619
Query 42726 GAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC- 42784
||||| ||||||||| ||| ||||||| |||||||||||||||||| || | |||
Sbjct 55618 GAGGGTATCTTCTTCAGCGGCTCCTTCGCGTCCATCTTCTGGCTCAAGAAGCGTG-GTCT 55560
Query 42785 GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGA 42844
|||||| || || || ||||| ||||| |||||| | |||||||| |||| | ||
Sbjct 55559 GATGCCTGGTCTGACATTCTCCAACGAGCTCATCTCTCGCGACGAGGGCATGCACACCGA 55500
Query 42845 CTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCG 42904
|||||||||||| || ||||| ||| ||| | ||||| | ||| ||
Sbjct 55499 CTTTGCCTGCCTGCTCTTCTCT---CACATCAAGTCGAAGCCGACCCCCGAGGCTGTTGA 55443
Query 42905 GGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGT 42964
| ||||| |||||||| ||||| ||| | |||||||| || | | || |||||
Sbjct 55442 GAAGATCATTGTCGAGGCCGTCGAGATTGAGCAAGAGTTCCTGACTGACGCTCTCCCCGT 55383
Query 42965 GTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCA 43024
| ||| ||||||||||| | |||||||||| ||||||| ||| || || ||||
Sbjct 55382 TGCTCTGCTCGGCATGAACGCTGGCCTCATGTGCCAGTACATTGAGTTTGTTGCTGACCG 55323
Query 43025 TCTCCTG-TGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTA 43083
|| ||| || | ||| || || ||||||| | | |||||||||||| |
Sbjct 55322 CCTGCTGGTGGCGCTTGGCAACAAGAAGCA-CTACAACTCTACCAACCCCTTCGACTTCA 55264
Query 43084 TGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACC 43143
|||||||||| ||| | | |||||||||||||| |||||||||||||| | ||||| |
Sbjct 55263 TGGAGAACATTTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTATC 55204
Query 43144 A 43144
|
Sbjct 55203 A 55203
>seq5249
Length=10599
Score = 277 bits (306), Expect = 3e-69
Identities = 663/992 (67%), Gaps = 28/992 (3%)
Strand=Plus/Minus
Query 244676 AGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATC 244735
||||| | | ||||| ||||||||| || ||||| || | | ||||||| |||||||
Sbjct 8090 AGGGCCAGGGAGGCCAAGTTGCAGACAGCAACCTCGTCGGGGGCAGTGTACTCGACAATC 8031
Query 244736 TCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTG 244795
|| ||| ||||| || ||||| ||||||| || || ||| |||| ||||
Sbjct 8030 TCACAGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTTTGGTTGCTCTTGCGGTTG 7971
Query 244796 CAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTG 244855
|| ||||||||||||||||||||||| ||||||||| ||| || | | | | |
Sbjct 7970 CAAGCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCCAAAATGGCG 7911
Query 244856 TTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTG 244915
| ||| || | | || || ||| ||| | ||| || |||||| |
Sbjct 7910 TACCACAGCTTCTGGGCGCGGATAGTCTCACGACCACGGCCTTCCCTCTCGTACCTCTCA 7851
Query 244916 TACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCAC 244975
||||| |||| |||||| ||| |||| ||| | || || ||| | ||||||
Sbjct 7850 TACAGCTCCTCAAACTCGTCGCCGTAGACATCGGCGAGACCCGGGGCCTCGTGAGGGCAC 7791
Query 244976 ATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGG 245035
|||||| |||| |||||| | || ||| | || |||||| || || || | ||| |||
Sbjct 7790 ATGAGAGTCCAATCGCCGTTTTGCTCGACACGCTTCATGAACAGATCAGGAACCCACAGG 7731
Query 245036 GCCTGGAAGAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCA 245093
|| | ||| | ||| | || | | | ||| ||| || |||||| | || || |
Sbjct 7730 GCGTAGAACAAGTCGC--GTGCGCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGA 7673
Query 245094 AAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCT 245153
||| ||||||||| ||||||| ||||||| ||||| || | || || || ||||
Sbjct 7672 GGAAGGGGAAGACGTCGGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGGCGCT 7613
Query 245154 TGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGC----GTTGAAGATGCGCAGGGTAGGC 245209
||||||| |||||||| || | |||||| |||| ||| || || | ||
Sbjct 7612 TGTTGCCACCCTGGTCAACG----TAGCGAGCGGTGTTGTTGTAGACACGGAGCATGGGA 7557
Query 245210 ACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCC-TTGCCCCTGAGGTT 245268
| | |||||| ||| ||||||||| || ||||||| ||| ||| | || |
Sbjct 7556 ATCAGGCCGTTGGAGGTGCCGTTGGTACCAGCAATGTAGGAGCCAGTTGAAC----GGAT 7501
Query 245269 GCTGATGGACATG----CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGA 245324
|| | ||||| | || | ||| ||||| |||||| || | ||| || ||||||
Sbjct 7500 GCGG-TGGACGTTGAGACCGATTCCACCGGCCGTCTTGGAAATCATGGCACAAGTCTTGA 7442
Query 245325 TGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACA 245384
|||||| |||||||| ||||||||| |||||||| || || ||||| || | |
Sbjct 7441 GGGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAA 7382
Query 245385 GCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGC 245444
|||||||||||||| | | | |||||||| ||||| ||||||||||||||
Sbjct 7381 GCTGGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGAGAAGCGTGGGTAAAGTACTTTT 7322
Query 245445 TCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGG 245504
|| | || |||||| | | || ||||| ||||||||||| | |
Sbjct 7321 GAGACATCAAGTTGTACGTTTCAATGGCCTTTTCAATGTTCTCGCCGTGGATTCCAACAG 7262
Query 245505 CGCACCTCATGAGGGTGTGCTGGGGCGTCTCG--ATGGGTCCCTCGGGTCCCTTGAGCAT 245562
|| | ||| | ||||||| || | ||| | | || | | | |||||
Sbjct 7261 CGACACGCATAATCATGTGCTGTGGTCTTTCGGCAACCTTGCCATCGATGC--GGAGCAA 7204
Query 245563 GTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCT 245622
||| || | ||||||||||||||| |||||||| |||| |||||| || ||
Sbjct 7203 GTATGACCTCTCGAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCGCGGTCGTAGAC 7144
Query 245623 GACGGCTGCGTCGAGTCTC-TCGGCGTGCTTC 245653
|| ||| | || ||| ||| ||||||||||||
Sbjct 7143 GATGGCCGAGTTGAG-CTCATCGGCGTGCTTC 7113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944271349228480
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