Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1666 284 2e-71 seq5249 277 3e-69 >seq1666 Length=59928 Score = 284 bits (314), Expect = 2e-71 Identities = 604/901 (67%), Gaps = 63/901 (7%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| ||||||||||||||||||||| ||| Sbjct 56096 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGATTGATCTG 56037 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAA 42415 ||||||| || |||| | | |||||| |||| || || ||| || Sbjct 56036 TCCAAGGATCTCCACGACTGGAACAAGC-GTCTGAACGACGACGAGCGCTTCTTCATCTC 55978 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 || | || |||||||| ||||| ||||| ||||| ||||| |||||| ||| | | Sbjct 55977 CCACGTTCTCGCCTTCTTTGCCGCGTCTGATGGCATTGTCAACGAGAACTTGGTCGAGCG 55918 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| || |||||| ||||| |||||||||||||| |||||||| || Sbjct 55917 CTTCAGCTCCGAAGTGCAGATTCCCGAGGCTCGCTGCTTCTACGGTTTCCAGATTATGAT 55858 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||| ||| ||| | || || ||||||||||| || ||| Sbjct 55857 GGAGAACATCCACTCGGAGACATACTCGCTCTTGATCGACACGTACATCAGCGAGCCCAA 55798 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGA------CG----ATGC------------ 42633 |||| ||| || ||||| ||||| || | || |||| Sbjct 55797 GCAGCGCAACTACCTCTTCAACGCCATTGACAATAGTACGTGACATGCACGTAGCGCTCT 55738 Query 42634 ---------------------------CCTGCATCAAGAAGAAGGCGGACTGGGCGCTCA 42666 ||||||||||||||||||| |||||||| || Sbjct 55737 ACCCGTCTTGCTGACGCGTCATAGTTCCCTGCATCAAGAAGAAGGCCGACTGGGCTCTGC 55678 Query 42667 ACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTC 42725 ||||||| | | | || | | || || | | | || | |||||| | |||||| Sbjct 55677 GCTGGATCT-GCGACAAGAACTCGACCTTTGCATCGCGTCTCATCGCCTTTGCTGCCGTC 55619 Query 42726 GAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC- 42784 ||||| ||||||||| ||| ||||||| |||||||||||||||||| || | ||| Sbjct 55618 GAGGGTATCTTCTTCAGCGGCTCCTTCGCGTCCATCTTCTGGCTCAAGAAGCGTG-GTCT 55560 Query 42785 GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGA 42844 |||||| || || || ||||| ||||| |||||| | |||||||| |||| | || Sbjct 55559 GATGCCTGGTCTGACATTCTCCAACGAGCTCATCTCTCGCGACGAGGGCATGCACACCGA 55500 Query 42845 CTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCG 42904 |||||||||||| || ||||| ||| ||| | ||||| | ||| || Sbjct 55499 CTTTGCCTGCCTGCTCTTCTCT---CACATCAAGTCGAAGCCGACCCCCGAGGCTGTTGA 55443 Query 42905 GGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGT 42964 | ||||| |||||||| ||||| ||| | |||||||| || | | || ||||| Sbjct 55442 GAAGATCATTGTCGAGGCCGTCGAGATTGAGCAAGAGTTCCTGACTGACGCTCTCCCCGT 55383 Query 42965 GTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCA 43024 | ||| ||||||||||| | |||||||||| ||||||| ||| || || |||| Sbjct 55382 TGCTCTGCTCGGCATGAACGCTGGCCTCATGTGCCAGTACATTGAGTTTGTTGCTGACCG 55323 Query 43025 TCTCCTG-TGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTA 43083 || ||| || | ||| || || ||||||| | | |||||||||||| | Sbjct 55322 CCTGCTGGTGGCGCTTGGCAACAAGAAGCA-CTACAACTCTACCAACCCCTTCGACTTCA 55264 Query 43084 TGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACC 43143 |||||||||| ||| | | |||||||||||||| |||||||||||||| | ||||| | Sbjct 55263 TGGAGAACATTTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTATC 55204 Query 43144 A 43144 | Sbjct 55203 A 55203 >seq5249 Length=10599 Score = 277 bits (306), Expect = 3e-69 Identities = 663/992 (67%), Gaps = 28/992 (3%) Strand=Plus/Minus Query 244676 AGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATC 244735 ||||| | | ||||| ||||||||| || ||||| || | | ||||||| ||||||| Sbjct 8090 AGGGCCAGGGAGGCCAAGTTGCAGACAGCAACCTCGTCGGGGGCAGTGTACTCGACAATC 8031 Query 244736 TCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTG 244795 || ||| ||||| || ||||| ||||||| || || ||| |||| |||| Sbjct 8030 TCACAGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTTTGGTTGCTCTTGCGGTTG 7971 Query 244796 CAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTG 244855 || ||||||||||||||||||||||| ||||||||| ||| || | | | | | Sbjct 7970 CAAGCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCCAAAATGGCG 7911 Query 244856 TTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTG 244915 | ||| || | | || || ||| ||| | ||| || |||||| | Sbjct 7910 TACCACAGCTTCTGGGCGCGGATAGTCTCACGACCACGGCCTTCCCTCTCGTACCTCTCA 7851 Query 244916 TACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCAC 244975 ||||| |||| |||||| ||| |||| ||| | || || ||| | |||||| Sbjct 7850 TACAGCTCCTCAAACTCGTCGCCGTAGACATCGGCGAGACCCGGGGCCTCGTGAGGGCAC 7791 Query 244976 ATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGG 245035 |||||| |||| |||||| | || ||| | || |||||| || || || | ||| ||| Sbjct 7790 ATGAGAGTCCAATCGCCGTTTTGCTCGACACGCTTCATGAACAGATCAGGAACCCACAGG 7731 Query 245036 GCCTGGAAGAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCA 245093 || | ||| | ||| | || | | | ||| ||| || |||||| | || || | Sbjct 7730 GCGTAGAACAAGTCGC--GTGCGCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGA 7673 Query 245094 AAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCT 245153 ||| ||||||||| ||||||| ||||||| ||||| || | || || || |||| Sbjct 7672 GGAAGGGGAAGACGTCGGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGGCGCT 7613 Query 245154 TGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGC----GTTGAAGATGCGCAGGGTAGGC 245209 ||||||| |||||||| || | |||||| |||| ||| || || | || Sbjct 7612 TGTTGCCACCCTGGTCAACG----TAGCGAGCGGTGTTGTTGTAGACACGGAGCATGGGA 7557 Query 245210 ACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCC-TTGCCCCTGAGGTT 245268 | | |||||| ||| ||||||||| || ||||||| ||| ||| | || | Sbjct 7556 ATCAGGCCGTTGGAGGTGCCGTTGGTACCAGCAATGTAGGAGCCAGTTGAAC----GGAT 7501 Query 245269 GCTGATGGACATG----CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGA 245324 || | ||||| | || | ||| ||||| |||||| || | ||| || |||||| Sbjct 7500 GCGG-TGGACGTTGAGACCGATTCCACCGGCCGTCTTGGAAATCATGGCACAAGTCTTGA 7442 Query 245325 TGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACA 245384 |||||| |||||||| ||||||||| |||||||| || || ||||| || | | Sbjct 7441 GGGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAA 7382 Query 245385 GCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGC 245444 |||||||||||||| | | | |||||||| ||||| |||||||||||||| Sbjct 7381 GCTGGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGAGAAGCGTGGGTAAAGTACTTTT 7322 Query 245445 TCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGG 245504 || | || |||||| | | || ||||| ||||||||||| | | Sbjct 7321 GAGACATCAAGTTGTACGTTTCAATGGCCTTTTCAATGTTCTCGCCGTGGATTCCAACAG 7262 Query 245505 CGCACCTCATGAGGGTGTGCTGGGGCGTCTCG--ATGGGTCCCTCGGGTCCCTTGAGCAT 245562 || | ||| | ||||||| || | ||| | | || | | | ||||| Sbjct 7261 CGACACGCATAATCATGTGCTGTGGTCTTTCGGCAACCTTGCCATCGATGC--GGAGCAA 7204 Query 245563 GTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCT 245622 ||| || | ||||||||||||||| |||||||| |||| |||||| || || Sbjct 7203 GTATGACCTCTCGAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCGCGGTCGTAGAC 7144 Query 245623 GACGGCTGCGTCGAGTCTC-TCGGCGTGCTTC 245653 || ||| | || ||| ||| |||||||||||| Sbjct 7143 GATGGCCGAGTTGAG-CTCATCGGCGTGCTTC 7113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944271349228480