Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 145 9e-30
>seq5249
Length=10599
Score = 145 bits (160), Expect = 9e-30
Identities = 1093/1748 (63%), Gaps = 40/1748 (2%)
Strand=Plus/Minus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|| ||||||||||| |||||||| || || |||||||| || | ||||| || |
Sbjct 8959 CGCAGGTAGTACATGCCCGTCTTCAGACCAAGCTTCCAGCCAGCAAAGTGCATGGAAGTG 8900
Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716
| |||| | || || | |||| || ||| | ||| || || ||||| |||
Sbjct 8899 ATCTTGCCCATCGTAGGCTCCTTCATGTGGATGTTGAGCGATTGAGACTGGTCGATAAAG 8840
Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 113776
||||| || || ||||| | | | | | || ||||||||||| ||
Sbjct 8839 GCACCACGGTCGGCAGCCATCTGGACGATGTTGCGCTGAGAAATCTCCCACACAGTCTTG 8780
Query 113777 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTG 113836
|||||| ||| || || || ||||| | || | ||| || |||||| | | |
Sbjct 8779 TAGAGGGCCTTGATGTCGTCGGGGATGTTGGGAATTTGTTGAATAGAGCCATTGGACGCG 8720
Query 113837 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG- 113895
| ||| | | |||||| | | ||||| ||||| || | || |||| | |
Sbjct 8719 ATGATGCGGTTCTTCATGTTGTCCGACCACAGACCCATGTCGACAAGGTCCTTAAGCAAC 8660
Query 113896 -ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCG 113954
||| | ||||||| |||||||| ||||| || | | || || |||| |
Sbjct 8659 CATGGGT--TGACAACTTGGAACTCACCAGCGAGCACACGACGCGAGTAAATGTTGGAGG 8602
Query 113955 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGG 114014
|||| |||||||| ||||| ||| || | ||||||| || ||||| || |||||||
Sbjct 8601 TGTAGGGCTCAAAACACTCGTTGAAGCCAAGGATTTGGCTAGTCGAGGCAGTAGGCATGG 8542
Query 114015 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCC 114074
| || | || | |||||| || | || | | ||| ||||||| || ||||
Sbjct 8541 GAGCAACAAGCAAGCTGTTGCGCACGCCGTGTAGAGCAATCTCGCCCTTGAGAGCCTCCC 8482
Query 114075 AGTCGTAGTTGAGCTTTGTCTCCCCCTG---CCACATATCAAACTGGAGGATACCTTGGG 114131
|||| || || | ||| | || |||||| || | || | ||| || || |
Sbjct 8481 AGTCCCAG---AGGTCTGTGGGCGTCTTGTTCCACATGTCGTATTGCAAGATGCCCTGAG 8425
Query 114132 AGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCG 114191
|||| ||||| || || | | | ||| | || || || |||| || | | |
Sbjct 8424 AGGCCGGCGAACCTTCGTACGACGAGTAAGCTCCATCCTTCTTAGCCAGCTCA-ATCGAG 8366
Query 114192 CC--TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCT 114248
| || ||||| |||| || || ||||| ||||| || || | ||||| |||||
Sbjct 8365 GCAGTC-AGGGCACCGTG-TAGATGGTCTCGAAAATCTGAATGTTAAGCTGCCT-GGCCT 8309
Query 114249 CGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 114308
|| || || || || | ||| | || |||| || || || | ||||||||
Sbjct 8308 CGGGAGAGTCGAAAGCCATGCGGAGGGCGAGGAAAGCATCGGCAAGGCCGTTGACACCGA 8249
Query 114309 GGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAAT 114365
|||| ||||| || | ||| || ||| | || ||| ||||| || ||
Sbjct 8248 CAGCAATCGGGCGGTGGCGCATGTTGCTCTTCCTGGC---CTCGGGAACGGGGTAGTGAT 8192
Query 114366 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 114425
| | ||||| | | | || || || ||| | |||| |||| || || ||||| |
Sbjct 8191 TGATGTCGATGATCTTGTTCAGGTTCTTGACAAGGACCTGGGTGACCTCGTGCAGCTTCT 8132
Query 114426 CGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 114485
| | | | | | |||| ||| |||| | | |||||||| | || |||| |
Sbjct 8131 TGAAGTTGTAGACACCATTCTCGACATCGACAAAGGTGGGAAGGGCCAGGGAGGCCAAGT 8072
Query 114486 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAAC 114545
| || |||| ||| || |||||||||| | ||| || |||| || || |
Sbjct 8071 TGCAGACAGCAACCTCGTCGGGGGCAGTGTACTCGACAATCTCACAGCACAGGTTGGAGC 8012
Query 114546 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCA 114605
| |||||| |||| ||||||||| || ||| ||| || || |||||||| ||||
Sbjct 8011 TGCGAATGGTACCCAGGTTCTTTTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCA 7952
Query 114606 TGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCT 114664
|| | || | || ||||| || || | || | ||| || | ||| | | || | |||
Sbjct 7951 TGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCCAAAATGGCGTACCACAGCTTCTG-GGCG 7893
Query 114665 GGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCT 114724
| | ||| | | || || ||| ||||||| | || || | ||||||||
Sbjct 7892 CGGATAGTCTCACGACCACGGCCTTCCCTCTCGTACCTCTCATACAGCTCCTCAAACTCG 7833
Query 114725 TCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA 114784
|| || | | || | ||| || || |||| | ||||| | ||||| ||| | ||
Sbjct 7832 TCGCCGTAGACATCGGCGAGACCCGGGGCCTCGTGAGGGCACATGAGAGTCCAATCGCCG 7773
Query 114785 CCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGA 114844
| ||| |||||||||||||| || || || | ||| || || |||| | || ||
Sbjct 7772 TTTTGCTCGACACGCTTCATGAACAGATCAGGAACCCACAGGGCGTAGAACAAGTCGCGT 7713
Query 114845 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 114904
||| | ||||| | || || || || | || | ||| | || || |||
Sbjct 7712 GCGCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAAGGGGAAGACGTCGGCG 7653
Query 114905 TGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTT 114958
||||| || |||||||| | || | | || | | || ||| ||||||
Sbjct 7652 TGCCAAGGCTCCAGGTAGATGGCAAAAGCACC---AGGGCGCTTGTTGCCACCCTGGTCA 7596
Query 114959 ACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCA 115018
|| || | || ||| || | || || ||||| ||||| | || | || |||
Sbjct 7595 ACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATGGGAATCAGGCCGTTGGAGGTGCCG 7536
Query 115019 TTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATAC 115076
|| || || || || ||| | | | | | || |||| || | ||| || |
Sbjct 7535 TTGGTACCAGCAATGTAGGAGCC--AGTTGAACGGATGCGGTGGACGTTGAGACCGATTC 7478
Query 115077 CCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCG 115136
| || ||| ||| || || || || | |||| || ||||||| || |||||
Sbjct 7477 CACCGGCCGTCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTAGATGCCCTCGATGC 7418
Query 115137 AGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGT 115196
||| |||| | |||| | |||||| | | || ||| | || ||||||||||
Sbjct 7417 TGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGGGGGTACCAGCGT 7358
Query 115197 TGAAGAGGGTTGGTGTCGCGTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTCC 115255
|||| | ||| || | |||||| | || ||| ||| |||||| | ||| || ||
Sbjct 7357 TGAACAAGGTGGGAGAAGCGTGGGT-AAAGTACTTTTGAGACATCAAGTTGTACGTTTCA 7299
Query 115256 AAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGG 115315
| | | ||||| || ||||| || || | | ||| ||||||| ||||| ||
Sbjct 7298 ATGGCCTTTTCAATGTTCTCGCCGTGGATTCCAACAGCGACACGCATAATCATGTGCTGT 7239
Query 115316 GGTGTTTC 115323
||| ||||
Sbjct 7238 GGTCTTTC 7231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597310680143840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |