Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq5249 324 1e-83 >seq5249 Length=10599 Score = 324 bits (358), Expect = 1e-83 Identities = 1089/1671 (65%), Gaps = 37/1671 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || || |||| ||| ||| | ||| || |||||| Sbjct 7162 AACTACCAATACTTTGGCTTCAAGACGCTCGAGAGGTCATACTTGCTCCGCATCGATGGC 7221 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| |||| |||| || || || | ||||| ||||| | || || |||||| | Sbjct 7222 AAGGTTGCCGAAAGACCACAGCACATGATTATGCGTGTCGCTGTTGGAATCCACGGCGAG 7281 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 |||| || | | | | || ||| | ||| | |||| || Sbjct 7282 AACATTGAAAAGGCCATTGAAACGTACAACTTGATGTCTCAAAAGTACTTTACCCACGCT 7341 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 | || ||| |||||||||| || ||||| ||| ||| | | || || ||| |||| Sbjct 7342 TCTCCCACCTTGTTCAACGCTGGTACCCCCAAGCCCCAGCTTGCATCATGCTTCTTGATC 7401 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| ||| |||| || || | ||||| ||||||| ||||| | || Sbjct 7402 GAC-ATGAAGGAGGACAGCATCGAGGGCATCTACGACACCCTCAAGACTTGTGCCATGAT 7460 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 || || || || |||||||| ||| |||||| | | ||| | | || ||||| Sbjct 7461 TTCCAAGACGGCCGGTGGAATCGGTCTCAACGTCCACCGCATCCGTTCAACTGGCTCCTA 7520 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| |||||||| ||||||||||||||||| | || |||||||| |||| |||||| Sbjct 7521 CATTGCTGGTACCAACGGCACCTCCAACGGCCTGATTCCCATGCTCCGTGTCTACAACAA 7580 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || |||||||| ||||||||||| | | | ||| |||| || |||| || Sbjct 7581 CACCGCTCGCTACGTTGACCAGGGTGGCAACAAGCGCCCTGGTGCTTTTGCCATCTACCT 7640 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||| |||||||| ||||| | ||| ||||||| || ||||||||||| || || Sbjct 7641 GGAGCCTTGGCACGCCGACGTCTTCCCCTTCCTCGACCTCCGCAAGAACCACGGAAAGGA 7700 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | || | ||| | |||||||| || ||||| || || || || ||||| || Sbjct 7701 AGAGGTCCGCGCACGCGACTTGTTCTACGCCCTGTGGGTTCCTGATCTGTTCATGAAGCG 7760 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 |||||| ||||| || |||| ||| | || || | || || || || |||| Sbjct 7761 TGTCGAGCAAAACGGCGATTGGACTCTCATGTGCCCTCACGAGGCCCCGGGTCTCGCCGA 7820 Query 94374 CGTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGCC 94431 || | || || | ||||| || |||||| | ||||| | | ||| | || | Sbjct 7821 TGTCTACGGCGACGAG-TTTGAGGAGCTGTATGAGAGGTACGAGAGGGAAGGCCGTGGTC 7879 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 | || ||| || |||||||||| | || |||| | ||| ||||| Sbjct 7880 -GTGAGACTATCCGCGCCCAGAAGCTGTGGTACGCCATTTTGGAGGCTCAGACCGAGACC 7938 Query 94492 GGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551 || | |||| ||| | | ||||||| || |||| |||| |||||| || |||| Sbjct 7939 GGCAACCCCTTCATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAAAAGAACCTG 7998 Query 94552 GGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611 || || ||||| || |||||| |||||||||||||| ||| | || |||||| Sbjct 7999 GGTACCATTCGCAGCTCCAACCTGTGCTGTGAGATTGTCGAGTACACTGCCCCCGACGAG 8058 Query 94612 ATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACA-- 94669 ||||||| || ||| ||| |||| | ||| |||| || || |||| | | | Sbjct 8059 GTTGCTGTCTGCAACTTGGCCTCCCTGGCCCTTCCCACCTTTGT---CGATGTCGAGAAT 8115 Query 94670 --CGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT 94727 |||||| |||| | ||| | ||| || | | | || | ||| Sbjct 8116 GGTGTCTACAACTTC-AAGAAGCTGCACGAG---GTCA----CCCAGG--TCCTTGTCAA 8165 Query 94728 GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787 ||||||||||| | | ||||||| || ||||||||| || ||||| ||| || Sbjct 8166 GAACCTGAACAAGATCATCGACATCAATCACTACCCCGTTCCCGAGGCCAGGAAGAGCAA 8225 Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847 | || || || || || | |||| ||| | || | || || || | | | Sbjct 8226 CATGCGCCACCGCCCGATTGCTGTCGGTGTCAACGGCCTTGCCGATGCTTTCCTCGCCCT 8285 Query 94848 GCGTCTGCCCTACGACTCTGTCGACGC--GGCGGGTTTGAATTTGAACATATTCGAAAGC 94905 || || | | ||||||| ||| || ||| | || || | | || ||||| | | Sbjct 8286 CCGCATGGCTTTCGACTCTCCCGAGGCCAGGCAGCTT--AACATTCAGATTTTCGAGACC 8343 Query 94906 ATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACAC 94965 || || |||| ||| ||| || | | |||| | ||| || | | || Sbjct 8344 ATCTA-CACGGTGCCCTGACTGCCTCGATTGAGCTGGCTAAGAAGGATGGAG---CTTAC 8399 Query 94966 GAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTG 95025 |||| | || ||||| |||||||| || || | |||| | ||| | Sbjct 8400 TCGTCGTACGAAGGTTCGCCGGCCTCTCAGGGCATCTTGCAATACGACATGTGGAACAAG 8459 Query 95026 AAGCCCTCGGGTCTGTACGACTGGGAAGCTCT-ACGCGCTGATGTTATCAAACACGGTGT 95084 | |||| | | || | |||||||| ||||| | | || || || |||||| || Sbjct 8460 ACGCCCACAGACCTCTGGGACTGGGAGGCTCTCAAGGGC-GAGATTGCTCTACACGGCGT 8518 Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144 | ||| ||||||| || |||||||| || ||||| || || ||||||||| Sbjct 8519 GCGCAACAGCTTGCTTGTTGCTCCCATGCCTACTGCCTCGACTAGCCAAATCCTTGGCTT 8578 Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204 |||||||| || || |||| |||||||||| | ||| | || |||||||| || || Sbjct 8579 CAACGAGTGTTTTGAGCCCTACACCTCCAACATTTACTCGCGTCGTGTGCTCGCTGGTGA 8638 Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTG 95263 |||| || ||||| | || ||||| || || | ||||| ||||| | Sbjct 8639 GTTCCAAGTTGTCAACCCATGGTTGCTTAAGGACCTTGTCGAC-ATGGGTCTGTGGTCGG 8697 Query 95264 ACAAGGTCAAGAACCAACTGCTACGCG-CCAACGGCTCCGTCCAGAACATCCCGCAAATA 95322 |||| | ||||||| | | |||| |||| ||||| | || | || || | || Sbjct 8698 ACAACATGAAGAACC-GCATCATCGCGTCCAATGGCTCTATTCAACAAATTCCCAACATC 8756 Query 95323 CCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || || ||||||||||| ||||||||||| ||||||||||| | |||||| Sbjct 8757 CCCGACGACATCAAGGCCCTCTACAAGACTGTGTGGGAGATTTCTCAGCGC 8807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494687654138080