Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 324 1e-83
>seq5249
Length=10599
Score = 324 bits (358), Expect = 1e-83
Identities = 1089/1671 (65%), Gaps = 37/1671 (2%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| |||||| || || |||| ||| ||| | ||| || ||||||
Sbjct 7162 AACTACCAATACTTTGGCTTCAAGACGCTCGAGAGGTCATACTTGCTCCGCATCGATGGC 7221
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| |||| |||| |||| || || || | ||||| ||||| | || || |||||| |
Sbjct 7222 AAGGTTGCCGAAAGACCACAGCACATGATTATGCGTGTCGCTGTTGGAATCCACGGCGAG 7281
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
|||| || | | | | || ||| | ||| | |||| ||
Sbjct 7282 AACATTGAAAAGGCCATTGAAACGTACAACTTGATGTCTCAAAAGTACTTTACCCACGCT 7341
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
| || ||| |||||||||| || ||||| ||| ||| | | || || ||| ||||
Sbjct 7342 TCTCCCACCTTGTTCAACGCTGGTACCCCCAAGCCCCAGCTTGCATCATGCTTCTTGATC 7401
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| ||| |||| || || | ||||| ||||||| ||||| | ||
Sbjct 7402 GAC-ATGAAGGAGGACAGCATCGAGGGCATCTACGACACCCTCAAGACTTGTGCCATGAT 7460
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073
|| || || || |||||||| ||| |||||| | | ||| | | || |||||
Sbjct 7461 TTCCAAGACGGCCGGTGGAATCGGTCTCAACGTCCACCGCATCCGTTCAACTGGCTCCTA 7520
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
||| |||||||| ||||||||||||||||| | || |||||||| |||| ||||||
Sbjct 7521 CATTGCTGGTACCAACGGCACCTCCAACGGCCTGATTCCCATGCTCCGTGTCTACAACAA 7580
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || |||||||| ||||||||||| | | | ||| |||| || |||| ||
Sbjct 7581 CACCGCTCGCTACGTTGACCAGGGTGGCAACAAGCGCCCTGGTGCTTTTGCCATCTACCT 7640
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
||||| |||||||| ||||| | ||| ||||||| || ||||||||||| || ||
Sbjct 7641 GGAGCCTTGGCACGCCGACGTCTTCCCCTTCCTCGACCTCCGCAAGAACCACGGAAAGGA 7700
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
|| | || | ||| | |||||||| || ||||| || || || || ||||| ||
Sbjct 7701 AGAGGTCCGCGCACGCGACTTGTTCTACGCCCTGTGGGTTCCTGATCTGTTCATGAAGCG 7760
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373
|||||| ||||| || |||| ||| | || || | || || || || ||||
Sbjct 7761 TGTCGAGCAAAACGGCGATTGGACTCTCATGTGCCCTCACGAGGCCCCGGGTCTCGCCGA 7820
Query 94374 CGTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGCC 94431
|| | || || | ||||| || |||||| | ||||| | | ||| | || |
Sbjct 7821 TGTCTACGGCGACGAG-TTTGAGGAGCTGTATGAGAGGTACGAGAGGGAAGGCCGTGGTC 7879
Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491
| || ||| || |||||||||| | || |||| | ||| |||||
Sbjct 7880 -GTGAGACTATCCGCGCCCAGAAGCTGTGGTACGCCATTTTGGAGGCTCAGACCGAGACC 7938
Query 94492 GGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551
|| | |||| ||| | | ||||||| || |||| |||| |||||| || ||||
Sbjct 7939 GGCAACCCCTTCATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAAAAGAACCTG 7998
Query 94552 GGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611
|| || ||||| || |||||| |||||||||||||| ||| | || ||||||
Sbjct 7999 GGTACCATTCGCAGCTCCAACCTGTGCTGTGAGATTGTCGAGTACACTGCCCCCGACGAG 8058
Query 94612 ATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACA-- 94669
||||||| || ||| ||| |||| | ||| |||| || || |||| | | |
Sbjct 8059 GTTGCTGTCTGCAACTTGGCCTCCCTGGCCCTTCCCACCTTTGT---CGATGTCGAGAAT 8115
Query 94670 --CGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT 94727
|||||| |||| | ||| | ||| || | | | || | |||
Sbjct 8116 GGTGTCTACAACTTC-AAGAAGCTGCACGAG---GTCA----CCCAGG--TCCTTGTCAA 8165
Query 94728 GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787
||||||||||| | | ||||||| || ||||||||| || ||||| ||| ||
Sbjct 8166 GAACCTGAACAAGATCATCGACATCAATCACTACCCCGTTCCCGAGGCCAGGAAGAGCAA 8225
Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847
| || || || || || | |||| ||| | || | || || || | | |
Sbjct 8226 CATGCGCCACCGCCCGATTGCTGTCGGTGTCAACGGCCTTGCCGATGCTTTCCTCGCCCT 8285
Query 94848 GCGTCTGCCCTACGACTCTGTCGACGC--GGCGGGTTTGAATTTGAACATATTCGAAAGC 94905
|| || | | ||||||| ||| || ||| | || || | | || ||||| | |
Sbjct 8286 CCGCATGGCTTTCGACTCTCCCGAGGCCAGGCAGCTT--AACATTCAGATTTTCGAGACC 8343
Query 94906 ATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACAC 94965
|| || |||| ||| ||| || | | |||| | ||| || | | ||
Sbjct 8344 ATCTA-CACGGTGCCCTGACTGCCTCGATTGAGCTGGCTAAGAAGGATGGAG---CTTAC 8399
Query 94966 GAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTG 95025
|||| | || ||||| |||||||| || || | |||| | ||| |
Sbjct 8400 TCGTCGTACGAAGGTTCGCCGGCCTCTCAGGGCATCTTGCAATACGACATGTGGAACAAG 8459
Query 95026 AAGCCCTCGGGTCTGTACGACTGGGAAGCTCT-ACGCGCTGATGTTATCAAACACGGTGT 95084
| |||| | | || | |||||||| ||||| | | || || || |||||| ||
Sbjct 8460 ACGCCCACAGACCTCTGGGACTGGGAGGCTCTCAAGGGC-GAGATTGCTCTACACGGCGT 8518
Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144
| ||| ||||||| || |||||||| || ||||| || || |||||||||
Sbjct 8519 GCGCAACAGCTTGCTTGTTGCTCCCATGCCTACTGCCTCGACTAGCCAAATCCTTGGCTT 8578
Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204
|||||||| || || |||| |||||||||| | ||| | || |||||||| || ||
Sbjct 8579 CAACGAGTGTTTTGAGCCCTACACCTCCAACATTTACTCGCGTCGTGTGCTCGCTGGTGA 8638
Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTG 95263
|||| || ||||| | || ||||| || || | ||||| ||||| |
Sbjct 8639 GTTCCAAGTTGTCAACCCATGGTTGCTTAAGGACCTTGTCGAC-ATGGGTCTGTGGTCGG 8697
Query 95264 ACAAGGTCAAGAACCAACTGCTACGCG-CCAACGGCTCCGTCCAGAACATCCCGCAAATA 95322
|||| | ||||||| | | |||| |||| ||||| | || | || || | ||
Sbjct 8698 ACAACATGAAGAACC-GCATCATCGCGTCCAATGGCTCTATTCAACAAATTCCCAACATC 8756
Query 95323 CCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
|| || ||||||||||| ||||||||||| ||||||||||| | ||||||
Sbjct 8757 CCCGACGACATCAAGGCCCTCTACAAGACTGTGTGGGAGATTTCTCAGCGC 8807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494687654138080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |