Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 138 1e-27
>seq5249
Length=10599
Score = 138 bits (152), Expect = 1e-27
Identities = 1091/1747 (62%), Gaps = 38/1747 (2%)
Strand=Plus/Minus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
|| ||||||||||| |||||||| || || |||||||| || | ||||| || |
Sbjct 8959 CGCAGGTAGTACATGCCCGTCTTCAGACCAAGCTTCCAGCCAGCAAAGTGCATGGAAGTG 8900
Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677
| |||| | || || | |||| || ||| | ||| || || ||||| |||
Sbjct 8899 ATCTTGCCCATCGTAGGCTCCTTCATGTGGATGTTGAGCGATTGAGACTGGTCGATAAAG 8840
Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737
|| || || || ||||| | | | | | || ||||||||||| ||
Sbjct 8839 GCACCACGGTCGGCAGCCATCTGGACGATGTTGCGCTGAGAAATCTCCCACACAGTCTTG 8780
Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG 115797
|||||| ||| || || || ||||| | || | ||| ||||||||| | | |
Sbjct 8779 TAGAGGGCCTTGATGTCGTCGGGGATGTTGGGAATTTGTTGAATAGAGCCATTGGACGCG 8720
Query 115798 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCT----CCAC 115853
| ||| | | |||||| | | ||||| ||||| || | || |||| | ||
Sbjct 8719 ATGATGCGGTTCTTCATGTTGTCCGACCACAGACCCATGTCGACAAGGTCCTTAAGCAAC 8660
Query 115854 GAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGT 115913
| | | |||||||| |||||||| ||||| || | | || |||||||
Sbjct 8659 CATGGG----TTGACAACTTGGAACTCACCAGCGAGCACACGACGCGAGTAAATGTTGGA 8604
Query 115914 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCAT 115973
||||| |||||||| ||||| ||| || | ||||||| || ||||| || |||||
Sbjct 8603 GGTGTAGGGCTCAAAACACTCGTTGAAGCCAAGGATTTGGCTAGTCGAGGCAGTAGGCAT 8544
Query 115974 GGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTC 116033
||| || | || | ||||||||| | || ||| ||||||| || ||
Sbjct 8543 GGGAGCAACAAGCAAGCTGTTGCGCACGCCGTGTAGAGCAATCTCGCCCTTGAGAGCCTC 8484
Query 116034 CCAGTCGTAGTTGAGCTTTGT---CTCCCCCTCCCACATATCAAACTGGAGGATACCTTG 116090
|||||| | ||| | ||| | | | |||||| || | || | ||| || ||
Sbjct 8483 CCAGTCCCA---GAGGTCTGTGGGCGTCTTGTTCCACATGTCGTATTGCAAGATGCCCTG 8427
Query 116091 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCT 116150
|| || ||||| || || | | | || | || || || |||| || | |
Sbjct 8426 AGAGGCCGGCGAACCTTCGTACGACGAGTAAGCTCCATCCTTCTTAGCCAGCTC-AATCG 8368
Query 116151 CGCC--TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGC 116207
| | || ||||| |||| || || ||||| ||||| || || | |||| ||||
Sbjct 8367 AGGCAGTC-AGGGCACCGTG-TAGATGGTCTCGAAAATCTGAATGTTAAGCTGCC-TGGC 8311
Query 116208 CTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACC 116267
|||| || || || || | ||| | || |||| || || || | ||||||
Sbjct 8310 CTCGGGAGAGTCGAAAGCCATGCGGAGGGCGAGGAAAGCATCGGCAAGGCCGTTGACACC 8251
Query 116268 GAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAA 116324
|| |||| ||||| || | ||| || ||| | || ||| ||||| ||
Sbjct 8250 GACAGCAATCGGGCGGTGGCGCATGTTGCTCTTCC---TGGCCTCGGGAACGGGGTAGTG 8194
Query 116325 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 116384
||| | ||||| | | | || || || ||| | |||| |||| || || |||||
Sbjct 8193 ATTGATGTCGATGATCTTGTTCAGGTTCTTGACAAGGACCTGGGTGACCTCGTGCAGCTT 8134
Query 116385 TTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAG 116444
| | | | | | | |||| ||| |||| | | |||||||| | || ||||
Sbjct 8133 CTTGAAGTTGTAGACACCATTCTCGACATCGACAAAGGTGGGAAGGGCCAGGGAGGCCAA 8074
Query 116445 ATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGA 116504
|| || |||| ||| || |||||||||| | ||| || |||| || ||
Sbjct 8073 GTTGCAGACAGCAACCTCGTCGGGGGCAGTGTACTCGACAATCTCACAGCACAGGTTGGA 8014
Query 116505 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAG 116564
|| |||||| |||| ||||||||| || ||| ||| || || |||||||||||
Sbjct 8013 GCTGCGAATGGTACCCAGGTTCTTTTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAG 7954
Query 116565 CATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGG 116623
||| | || | || ||||| || || | || | ||| || | ||| | | || | ||
Sbjct 7953 CATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCCAAAATGGCGTACCACAGCTTCTG-GG 7895
Query 116624 CTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACT 116683
| | | ||| | | || || ||| ||||||| | || || |||||||||
Sbjct 7894 CGCGGATAGTCTCACGACCACGGCCTTCCCTCTCGTACCTCTCATACAGCTCCTCAAACT 7835
Query 116684 CTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGAC 116743
| || || | || | ||| || || |||| | || || | ||||| ||| | |
Sbjct 7834 CGTCGCCGTAGACATCGGCGAGACCCGGGGCCTCGTGAGGGCACATGAGAGTCCAATCGC 7775
Query 116744 CACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC 116803
| | ||| || ||||||||||| || || || | ||| || || |||| | || |
Sbjct 7774 CGTTTTGCTCGACACGCTTCATGAACAGATCAGGAACCCACAGGGCGTAGAACAAGTCGC 7715
Query 116804 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 116863
| ||| | ||||| | || || || || | || | ||| | || || |
Sbjct 7714 GTGCGCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAAGGGGAAGACGTCGG 7655
Query 116864 CGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTA 116920
||||||| || |||||||| | || | | || ||| ||| |||||| |
Sbjct 7654 CGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGGCGCTTGTTGCCACCCTGGTCAA 7595
Query 116921 CATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCAT 116980
| || | || || ||| | || || ||||| ||||| | || | || ||| |
Sbjct 7594 CGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATGGGAATCAGGCCGTTGGAGGTGCCGT 7535
Query 116981 TTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACC 117038
| || || || || ||| | ||| | | || ||||| || | ||| || ||
Sbjct 7534 TGGTACCAGCAATGTAGGAG-CCAGTT-GAACGGATGCGGTGGACGTTGAGACCGATTCC 7477
Query 117039 CCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGA 117098
|| ||| ||| || || || || | |||| || ||||||| || |||||
Sbjct 7476 ACCGGCCGTCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTAGATGCCCTCGATGCT 7417
Query 117099 GTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTT 117158
||| |||| | |||| | |||||| | | || ||| | || |||||||||||
Sbjct 7416 GTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGGGGGTACCAGCGTT 7357
Query 117159 GAAGAGGGTTGGTGTCGCGTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTCCA 117217
||| | ||| || | |||||| | || ||| ||| |||||| | ||| || || |
Sbjct 7356 GAACAAGGTGGGAGAAGCGTGGGT-AAAGTACTTTTGAGACATCAAGTTGTACGTTTCAA 7298
Query 117218 AGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGG 117277
| | ||||| || ||||| || || | | ||| ||||||| ||||| || |
Sbjct 7297 TGGCCTTTTCAATGTTCTCGCCGTGGATTCCAACAGCGACACGCATAATCATGTGCTGTG 7238
Query 117278 GTGTTTC 117284
|| ||||
Sbjct 7237 GTCTTTC 7231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613463119507680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |