Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq5249 138 1e-27 >seq5249 Length=10599 Score = 138 bits (152), Expect = 1e-27 Identities = 1091/1747 (62%), Gaps = 38/1747 (2%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| |||||||| || || |||||||| || | ||||| || | Sbjct 8959 CGCAGGTAGTACATGCCCGTCTTCAGACCAAGCTTCCAGCCAGCAAAGTGCATGGAAGTG 8900 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | |||| | || || | |||| || ||| | ||| || || ||||| ||| Sbjct 8899 ATCTTGCCCATCGTAGGCTCCTTCATGTGGATGTTGAGCGATTGAGACTGGTCGATAAAG 8840 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 || || || || ||||| | | | | | || ||||||||||| || Sbjct 8839 GCACCACGGTCGGCAGCCATCTGGACGATGTTGCGCTGAGAAATCTCCCACACAGTCTTG 8780 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG 115797 |||||| ||| || || || ||||| | || | ||| ||||||||| | | | Sbjct 8779 TAGAGGGCCTTGATGTCGTCGGGGATGTTGGGAATTTGTTGAATAGAGCCATTGGACGCG 8720 Query 115798 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCT----CCAC 115853 | ||| | | |||||| | | ||||| ||||| || | || |||| | || Sbjct 8719 ATGATGCGGTTCTTCATGTTGTCCGACCACAGACCCATGTCGACAAGGTCCTTAAGCAAC 8660 Query 115854 GAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGT 115913 | | | |||||||| |||||||| ||||| || | | || ||||||| Sbjct 8659 CATGGG----TTGACAACTTGGAACTCACCAGCGAGCACACGACGCGAGTAAATGTTGGA 8604 Query 115914 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCAT 115973 ||||| |||||||| ||||| ||| || | ||||||| || ||||| || ||||| Sbjct 8603 GGTGTAGGGCTCAAAACACTCGTTGAAGCCAAGGATTTGGCTAGTCGAGGCAGTAGGCAT 8544 Query 115974 GGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTC 116033 ||| || | || | ||||||||| | || ||| ||||||| || || Sbjct 8543 GGGAGCAACAAGCAAGCTGTTGCGCACGCCGTGTAGAGCAATCTCGCCCTTGAGAGCCTC 8484 Query 116034 CCAGTCGTAGTTGAGCTTTGT---CTCCCCCTCCCACATATCAAACTGGAGGATACCTTG 116090 |||||| | ||| | ||| | | | |||||| || | || | ||| || || Sbjct 8483 CCAGTCCCA---GAGGTCTGTGGGCGTCTTGTTCCACATGTCGTATTGCAAGATGCCCTG 8427 Query 116091 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCT 116150 || || ||||| || || | | | || | || || || |||| || | | Sbjct 8426 AGAGGCCGGCGAACCTTCGTACGACGAGTAAGCTCCATCCTTCTTAGCCAGCTC-AATCG 8368 Query 116151 CGCC--TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGC 116207 | | || ||||| |||| || || ||||| ||||| || || | |||| |||| Sbjct 8367 AGGCAGTC-AGGGCACCGTG-TAGATGGTCTCGAAAATCTGAATGTTAAGCTGCC-TGGC 8311 Query 116208 CTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACC 116267 |||| || || || || | ||| | || |||| || || || | |||||| Sbjct 8310 CTCGGGAGAGTCGAAAGCCATGCGGAGGGCGAGGAAAGCATCGGCAAGGCCGTTGACACC 8251 Query 116268 GAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAA 116324 || |||| ||||| || | ||| || ||| | || ||| ||||| || Sbjct 8250 GACAGCAATCGGGCGGTGGCGCATGTTGCTCTTCC---TGGCCTCGGGAACGGGGTAGTG 8194 Query 116325 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 116384 ||| | ||||| | | | || || || ||| | |||| |||| || || ||||| Sbjct 8193 ATTGATGTCGATGATCTTGTTCAGGTTCTTGACAAGGACCTGGGTGACCTCGTGCAGCTT 8134 Query 116385 TTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAG 116444 | | | | | | | |||| ||| |||| | | |||||||| | || |||| Sbjct 8133 CTTGAAGTTGTAGACACCATTCTCGACATCGACAAAGGTGGGAAGGGCCAGGGAGGCCAA 8074 Query 116445 ATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGA 116504 || || |||| ||| || |||||||||| | ||| || |||| || || Sbjct 8073 GTTGCAGACAGCAACCTCGTCGGGGGCAGTGTACTCGACAATCTCACAGCACAGGTTGGA 8014 Query 116505 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAG 116564 || |||||| |||| ||||||||| || ||| ||| || || ||||||||||| Sbjct 8013 GCTGCGAATGGTACCCAGGTTCTTTTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAG 7954 Query 116565 CATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGG 116623 ||| | || | || ||||| || || | || | ||| || | ||| | | || | || Sbjct 7953 CATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCCAAAATGGCGTACCACAGCTTCTG-GG 7895 Query 116624 CTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACT 116683 | | | ||| | | || || ||| ||||||| | || || ||||||||| Sbjct 7894 CGCGGATAGTCTCACGACCACGGCCTTCCCTCTCGTACCTCTCATACAGCTCCTCAAACT 7835 Query 116684 CTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGAC 116743 | || || | || | ||| || || |||| | || || | ||||| ||| | | Sbjct 7834 CGTCGCCGTAGACATCGGCGAGACCCGGGGCCTCGTGAGGGCACATGAGAGTCCAATCGC 7775 Query 116744 CACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC 116803 | | ||| || ||||||||||| || || || | ||| || || |||| | || | Sbjct 7774 CGTTTTGCTCGACACGCTTCATGAACAGATCAGGAACCCACAGGGCGTAGAACAAGTCGC 7715 Query 116804 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 116863 | ||| | ||||| | || || || || | || | ||| | || || | Sbjct 7714 GTGCGCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAAGGGGAAGACGTCGG 7655 Query 116864 CGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTA 116920 ||||||| || |||||||| | || | | || ||| ||| |||||| | Sbjct 7654 CGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGGCGCTTGTTGCCACCCTGGTCAA 7595 Query 116921 CATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCAT 116980 | || | || || ||| | || || ||||| ||||| | || | || ||| | Sbjct 7594 CGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATGGGAATCAGGCCGTTGGAGGTGCCGT 7535 Query 116981 TTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACC 117038 | || || || || ||| | ||| | | || ||||| || | ||| || || Sbjct 7534 TGGTACCAGCAATGTAGGAG-CCAGTT-GAACGGATGCGGTGGACGTTGAGACCGATTCC 7477 Query 117039 CCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGA 117098 || ||| ||| || || || || | |||| || ||||||| || ||||| Sbjct 7476 ACCGGCCGTCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTAGATGCCCTCGATGCT 7417 Query 117099 GTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTT 117158 ||| |||| | |||| | |||||| | | || ||| | || ||||||||||| Sbjct 7416 GTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGGGGGTACCAGCGTT 7357 Query 117159 GAAGAGGGTTGGTGTCGCGTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTCCA 117217 ||| | ||| || | |||||| | || ||| ||| |||||| | ||| || || | Sbjct 7356 GAACAAGGTGGGAGAAGCGTGGGT-AAAGTACTTTTGAGACATCAAGTTGTACGTTTCAA 7298 Query 117218 AGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGG 117277 | | ||||| || ||||| || || | | ||| ||||||| ||||| || | Sbjct 7297 TGGCCTTTTCAATGTTCTCGCCGTGGATTCCAACAGCGACACGCATAATCATGTGCTGTG 7238 Query 117278 GTGTTTC 117284 || |||| Sbjct 7237 GTCTTTC 7231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613463119507680