Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1666 141 1e-28 >seq1666 Length=59928 Score = 141 bits (156), Expect = 1e-28 Identities = 349/522 (67%), Gaps = 22/522 (4%) Strand=Plus/Minus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAGTCGC 102168 |||||| || || | ||||| || || |||||| || ||| | || |||| | | Sbjct 55715 AGTTCCCTGCATCAAGAAGAAGGCCGACTGGGCTCTGCGCTGGATCTGCGACAAGAACTC 55656 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 | ||||||| ||| ||| |||| ||||| || ||||||||||||||| || | Sbjct 55655 GA-CCTTTGCATCGCGTCTCATCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGCT 55597 Query 102229 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287 ||||| ||| | || | |||||||||||||| ||||| ||||| ||||| |||||| Sbjct 55596 CCTTC-GCGTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCTGGTCTGACATTCTCC 55538 Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACT--TTT 102343 |||||||| |||||||| |||||||| | ||| || ||||| | | || | | Sbjct 55537 AACGAGCTCATCTCTCGCGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTCTTCTCT 55478 Query 102344 CAAATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGT 102403 || || | || || || || | ||| || || | || || || ||||| Sbjct 55477 CACATCAAGTCG----AAGCCGACCCCCGAGGCTGTTGAGAAGATCATTGTCGAGGCCGT 55422 Query 102404 TGAGATTGAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTC 102463 ||||||||| | | ||| | || || || || ||||| |||| ||||| | Sbjct 55421 CGAGATTGAGCAAGAGTTCCTGACTGACGCTCTCCCCGTTGCTCTGCTCGGCATGAACGC 55362 Query 102464 TGAAAAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGT 102523 || |||| | | || ||||||| ||| |||| | || || | | | | Sbjct 55361 TGGCCTCATGTGCCAGTACATTGAGTTTGTTGCTGACCGCCTGCTGGTGGCGCT-----T 55307 Query 102524 GCCTCCAA-----TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTC 102578 | | ||| | ||||| | || || || |||||||||||||||||| ||| Sbjct 55306 GGCAACAAGAAGCACTACAACTCTACCAACCCCTTCGACTTCATGGAGAACATTTCGCTC 55247 Query 102579 GACGGGAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTAT 102620 |||| ||||| ||||||||||| ||| | ||||| |||||| Sbjct 55246 AACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTAT 55205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620697799658560