Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5249 147 3e-30 >seq5249 Length=10599 Score = 147 bits (162), Expect = 3e-30 Identities = 368/556 (66%), Gaps = 11/556 (2%) Strand=Plus/Minus Query 110268 ATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTC 110327 || |||| | |||| || || | || || | ||||| |||| | |||||| | | Sbjct 8106 ATCGACAAAGGTGGGAAGGGCCAGGGAGGCCAAGTTGCAGACAGCAACCTCGTCGGGGGC 8047 Query 110328 GGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTG 110387 ||||| || | ||| || |||| |||||| || |||| ||||| |||||| || Sbjct 8046 AGTGTACTCGACAATCTCACAGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTTTG 7987 Query 110388 ATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTG 110447 || ||| |||||| || ||||| ||||||||| | ||| | || || || ||||| Sbjct 7986 GTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTG 7927 Query 110448 TGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTT 110506 | || | |||||| | ||| | | || | |||| ||| ||| | | | | |||| Sbjct 7926 AGCCTCCAAAATGGCGTACCACAGCTTCTG-GGCGCGGATAGTCTCACGACCACGGCCTT 7868 Query 110507 CCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCT 110566 || ||||||| | |||| |||||||| || | ||||| ||||| | |||||| Sbjct 7867 CCCTCTCGTACCTCTCATACAGCTCCTCAAACTCGTCGCCGTAGACATCGGCGAGACCCG 7808 Query 110567 TCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACA 110626 |||| || || || | ||| | ||||| || | ||| || | ||||||||||| Sbjct 7807 GGGCCTCGTGAGGGCACATGAGAGTCCAATCGCCGTTTTGCTCGACACGCTTCATGAACA 7748 Query 110627 GGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGT 110686 | ||||||| ||||| || |||| | ||| || || ||||||| | || |||| Sbjct 7747 GATCAGGAACCCACAGGGCGTAGAACAAGTCGCGTGCGCGGACCTCTTCCTTTCCGTGGT 7688 Query 110687 TGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA 110746 | ||| || || | ||| | || || | |||||| || || || |||| || | Sbjct 7687 TCTTGCGGAGGTCGAGGAAGGGGAAGACGTCGGCGTGCCAAGGCTCCAGGTAGATGGCAA 7628 Query 110747 TGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGA 110800 | || | | || || |||||| ||| ||||| || ||| ||| ||| Sbjct 7627 AAGCACC---AGGGCGCTTGTTGCCACCCTGGTCAACGTAGCGAGCGGTGTTGTTGTAGA 7571 Query 110801 CCCTGAGCATAGGAAT 110816 | | |||||| ||||| Sbjct 7570 CACGGAGCATGGGAAT 7555 Score = 123 bits (136), Expect = 3e-23 Identities = 305/455 (67%), Gaps = 12/455 (3%) Strand=Plus/Minus Query 109399 GCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATA-TG 109457 |||| | ||| || || ||||| ||||| || |||||| |||||| || || | || Sbjct 8968 GCCTGAGTGCGCAGGTAGTACATGCCCGTCTTCAGACCAAGCTTCCA-GCCAGCAAAGTG 8910 Query 109458 CATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTG 109517 ||| |||| || ||| | || || || ||| | ||| | ||| |||||||| Sbjct 8909 CATGGAAGTGATCTTGCCCATCGTAGGCTCCTTCATGTGGATGTTGAGCGATTGAGACTG 8850 Query 109518 ATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTGGCTAATTTC 109574 ||||| || |||||| || || ||||| | ||||| | | || | ||| || Sbjct 8849 GTCGATAAAGGCACCACGGTCGGCAGCCATCTGGACGATGTTGCGCT---GAGAAATCTC 8793 Query 109575 CCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGA 109634 ||| ||||||||||| | |||||| || ||||| |||| || | ||||||||| Sbjct 8792 CCACACAGTCTTGTAGAGGGCCTTGATGTCGTCGGGGATGTTGGGAATTTGTTGAATAGA 8733 Query 109635 GCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAG 109694 |||| | | | ||| | | |||||| | | |||||| ||||| | | || Sbjct 8732 GCCATTGGACGCGATGATGCGGTTCTTCATGTTGTCCGACCACAGACCCATGTCGACAAG 8673 Query 109695 ATCGTCAA-CAAG-ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGG 109752 || | || ||| ||| |||||| || || |||||||| || || || | Sbjct 8672 GTCCTTAAGCAACCATGG--GTTGACAACTTGGAACTCACCAGCGAGCACACGACGCGAG 8615 Query 109753 TAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAA 109812 || ||||| | |||||||| || |||||||| ||| ||| |||||||| ||| || Sbjct 8614 TAAATGTTGGAGGTGTAGGGCTCAAAACACTCGTTGAAGCCAAGGATTTGGCTAGTCGAG 8555 Query 109813 GCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCG 109847 || || ||||||||||| | || | ||||| || Sbjct 8554 GCAGTAGGCATGGGAGCAACAAGCAAGCTGTTGCG 8520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588933682074400