Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 167 3e-36
>seq5249
Length=10599
Score = 167 bits (184), Expect = 3e-36
Identities = 611/947 (65%), Gaps = 11/947 (1%)
Strand=Plus/Minus
Query 106437 TCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 106496
|||| ||| |||| | | |||||||| | || ||||| ||||| ||||| ||| |
Sbjct 8113 TCTCGACATCGACAAAGGTGGGAAGGGCCAGGGAGGCCAAGTTGCAGACAGCAACCTCGT 8054
Query 106497 CCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAAT 106556
| | |||||||| | ||| || |||| |||||| || ||| || |||| |
Sbjct 8053 CGGGGGCAGTGTACTCGACAATCTCACAGCACAGGTTGGAGCTGCGAATGGTACCCAGGT 7994
Query 106557 TCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 106616
|||||||||| ||||| |||||| || ||||||||||||||| |||| | || ||||
Sbjct 7993 TCTTTTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCT 7934
Query 106617 CCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCC 106675
| ||||| | || | ||| || | ||||| | || | ||| | | | | | |
Sbjct 7933 CGGTCTGAGCCTCCAAAATGGCGTACCACAGCTTCTG-GGCGCGGATAGTCTCACGACCA 7875
Query 106676 CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAG 106735
|| || ||| ||||||| | || || | |||||||| || || | |||| |
Sbjct 7874 CGGCCTTCCCTCTCGTACCTCTCATACAGCTCCTCAAACTCGTCGCCGTAGACATCGGCG 7815
Query 106736 AGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTC 106795
||||| || |||| || || || | |||| ||| | || | ||| || ||||||
Sbjct 7814 AGACCCGGGGCCTCGTGAGGGCACATGAGAGTCCAATCGCCGTTTTGCTCGACACGCTTC 7755
Query 106796 ATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTC 106854
||||| || || |||| |||||||| | || | || | | | | || ||||||| |
Sbjct 7754 ATGAACAGATCAGGAACCCACAGGGCGTAGAACAAGTCGCGTGCGCGGA-CCTCTTCCTT 7696
Query 106855 ACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATA 106914
|| ||||| || | || ||||| | || || |||||||| ||||| || ||
Sbjct 7695 TCCGTGGTTCTTGCGGAGGTCGAGGAAGGGGAAGACGTCGGCGTGCCAAGGCTCCAGGTA 7636
Query 106915 GACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGT 106970
|| || | || || | | | | ||| | || | || ||||| || ||| ||
Sbjct 7635 GATGGCAAAAGCACCAGGGCGCTTGTTG-CCACCCTGGTCAACGTAGCGAGCGGTGTTGT 7577
Query 106971 TAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAG 107030
| | || || ||||| ||||| | || | || || || || || ||| |
Sbjct 7576 TGTAGACACGGAGCATGGGAATCAGGCCGTTGGAGGTGCCGTTGGTACCAGCAATGTAGG 7517
Query 107031 ATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTT 107090
| | | | | | |||| || | || || || || ||| ||| || ||
Sbjct 7516 AGCCAGTTGAACGGATGCGGTGGACGTTGAGACCGATTCCACCGGCCGTCTTGGAAATCA 7457
Query 107091 GCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAA 107150
||||| | | || || | ||||| || | ||| ||||||||| || |||| |
Sbjct 7456 TGGCACAAGTCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCATGTCGATCA 7397
Query 107151 GGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGT 107210
|||||| | | ||| || | || |||||||| ||||| | ||| || | ||||
Sbjct 7396 AGAAGCATGATGCAAGCTGGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGAGAAGCGT 7337
Query 107211 GAATGAACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCC 107269
| | || ||| ||| |||||| || ||| || || | | | ||||||| ||
Sbjct 7336 GGGT-AAAGTACTTTTGAGACATCAAGTTGTACGTTTCAATGGCCTTTTCAATGTTCTCG 7278
Query 107270 CCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCA 107329
|||||||| || | || |||||||||| ||||| || ||| |||| | |||||
Sbjct 7277 CCGTGGATTCCAACAGCGACACGCATAATCATGTGCTGTGGTCTTTCGGCAACCTTGCCA 7218
Query 107330 TCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376
|||| || | | || | |||| || || |||| ||||||||
Sbjct 7217 TCGATGCGGAGCAAGTATGACCTCTCGAGCGTCTTGAAGCCAAAGTA 7171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589938409879520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |