Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq382 127 2e-24
>seq382
Length=29631
Score = 127 bits (140), Expect = 2e-24
Identities = 270/402 (67%), Gaps = 6/402 (1%)
Strand=Plus/Minus
Query 29985 GCTCACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTC 30041
||| ||||| ||||| | ||||| |||||||| || || ||||| | |||
Sbjct 28327 GCTGACGTAGAACTGCGCAAACATG---TGGCACGGCGGCAGGGCCATCTTCTTGAGGTC 28271
Query 30042 TTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC 30101
|||||||| |||| || ||||||||||| ||| || |||| | | |||
Sbjct 28270 GGCCGGGTTCCACGCGCTCATGATGATGCGCCGGTCGAAGGGCTTGTGGCGCAGCTTGTC 28211
Query 30102 CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTA 30161
| | ||| |||||| || || ||| |||| |||||| || ||| |||
Sbjct 28210 GATGACGTCGGCCAGCTGGTCGACGCCCTGTCCCGTGTAGTCGGCGTGGCAGTCGACGTA 28151
Query 30162 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30221
|| || || || |||| |||||||||||||||||| || |||||||| ||||| || |
Sbjct 28150 GTCGGCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCCTCGCG 28091
Query 30222 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30281
||| | | ||| |||||| || | | || |||||| ||||||||||||| |
Sbjct 28090 GTGGCCCAGTCCCACGCTGTCCAGGAACGCCCGCGACCCGTTGCCGTCCCAGATCTTGAT 28031
Query 30282 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30341
|||| || | ||| ||||| ||| || || |||||| |||||||| |
Sbjct 28030 CCCCGCGTCTGTCAGCGGCTTGGATGATGTCCTGCCCGAGATGAACCAGAGCAGCTCGGC 27971
Query 30342 CACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
| |||||| | ||||| | |||||| |||||||| ||
Sbjct 27970 GATGACGGCGCGCAGGAAGACGCGCTTGGTTGTGAGGAGTGG 27929
Score = 113 bits (124), Expect = 4e-20
Identities = 137/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 29778 GGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTC 29837
|||||| | ||||||||| || |||| || || || || ||||||||||| |||||
Sbjct 28594 GGGCTCGCGCTCGAGCTGCTGCTGAAGCGCGTCGACATGGTCGAGGTAGACGTGCGCGTC 28535
Query 29838 TCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29897
|||| |||||| | | || || | || || |||||| |||| ||||| ||
Sbjct 28534 GCCCATGGTGTGCGTCAGCGAGCCGGGCACCAGGTCGCAGACGTGTGCCAGCATGTGGGT 28475
Query 29898 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 29957
||| || | ||||||||| ||||| ||||| || ||||| |||||||| | || | |||
Sbjct 28474 GAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCGAGGCCCATGTCGCAGGAGCGCTG 28415
Query 29958 GTAGAGC 29964
||| |||
Sbjct 28414 GTACAGC 28408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408588974804804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |