Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 288 2e-72
seq1666 233 4e-56
>seq5249
Length=10599
Score = 288 bits (318), Expect = 2e-72
Identities = 1095/1704 (64%), Gaps = 81/1704 (5%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | || ||| ||||||| ||||| || ||||||||||| |||||
Sbjct 8995 ACGGTGAACTGAATGGGGGCAGATGCAGCCTGAGTGCGCAGGTAGTACATGCCCGTCTTC 8936
Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669
|| || ||| |||||| | |||||| | |||| || || | || | |
Sbjct 8935 AGACCAAGCTT---CCAGCCAGCAAAGTGCATGGAAGTGATCTTGCCCATCGTAGGCTCC 8879
Query 212670 TGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCC 212729
| |||| |||| | ||| || || ||| |||||| || || | |
Sbjct 8878 T--TCAT----GTGG---------ATGTTGAGCGATTGAGACTGGTCGATAAAGGCACCA 8834
Query 212730 CTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT 212789
| ||| || ||||| | | ||| | | ||| || | ||||||||| |||||| |||
Sbjct 8833 CGGTCGGCAGCCATCTGGACGATGTTGCGCTGAGAAATCTCCCACACAGTCTTGTAGAGG 8774
Query 212790 TCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC 212849
| |||| ||| || |||| | ||| || | || | ||| || || | | |
Sbjct 8773 GCCTTGATGTCGTCGGGGATGTTGGGAATTTGTTGAATAGAGCCATTGGACGCGATGA-- 8716
Query 212850 TGCAGGCG--CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAG 212907
||| | ||||| || ||| || ||| || | ||| ||| | || |
Sbjct 8715 TGCGGTTCTTCATGTTGTCCGACCACAGACCCATGTCGACAAGGTCCTTAAGCAACCATG 8656
Query 212908 GGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGG 212967
||||||| | ||||| ||||| | |||||| | | | ||||| ||| || |||||||
Sbjct 8655 GGTTGACAACTTGGAACTCACCAGCGAGCACACGACGCGAGTAAATGTTGGAGGTGTAGG 8596
Query 212968 GCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCA 213027
|||| | | ||||||| || || || || ||| ||| || ||||||||||| |
Sbjct 8595 GCTCAAAACACTCGTTGAAGCCAAGGATTTGGCTAGTCGAGGCAGTAGGCATGGGAGCAA 8536
Query 213028 CCAGGAGACTGTTCCTCACTCCGTG---------CTCGCCGATGAGGCGCCGAAGCTCTG 213078
| || | ||||| | ||| ||||| |||||| |||| ||| ||
Sbjct 8535 CAAGCAAGCTGTTGCGCACGCCGTGTAGAGCAATCTCGCCCTTGAG-------AGC-CT- 8485
Query 213079 CCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGA 213138
|||||||||| ||||| | | || |||||||||||| | |||||||
Sbjct 8484 CCCAGTCCCAG---------AGGTCTGTGGGCGTCTTGTTCCACATGTCGTATTGCAAGA 8434
Query 213139 TGCCTTTGCTCACGGGGCTGC----CCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCC 213194
|||| || | || | || | | ||| || ||||| | |||| || ||| |||
Sbjct 8433 TGCC----CTGAGAGGCCGGCGAACCTTCGTACGACGAGTAAGCTCCATCCTTCTTAGCC 8378
Query 213195 AGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGC 213254
||||| || || ||||||| ||| ||||||||| || || |||| |||| |||
Sbjct 8377 AGCTCAATCGAGGCAGTCAGGGCACCGT-GTAGATGGTCTCGAAAATCTGAATGTTAAGC 8319
Query 213255 TTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCC 213314
| | ||||||| || || ||| | ||| | | |||| |||| || || ||
Sbjct 8318 TGCCTGGCCTCGGGAGAGTCGAAAGCCATGCGGAGGGCGAGGAAAGCATCGGCAAGGCCG 8259
Query 213315 TGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGG 213374
| ||| |||| | || || | ||| | || ||| ||| | ||| | ||||
Sbjct 8258 TTGACACCGACAGCAATCGGGCGGTGGCGCATGTTGCTCTTCCTGGCCTCGGGAACGGGG 8199
Query 213375 TAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCC 213434
|| ||| ||||||||||||||| ||||| | || | |||||| | | |
Sbjct 8198 TAGTGATTGATGTCGATGATCTTGTTCAGGTTCTTGACAAGGACCTGGGTGACCTCGTGC 8139
Query 213435 AGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTG 213494
|| | || | ||| | || | || | | ||||| || ||||| | | |
Sbjct 8138 AGCTTCTTGAAGTTGTAGACACCATTCTCGACATCGACAAAGGTGGGAAGGGCCAGGGAG 8079
Query 213495 GCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554
|||| |||||| || || ||||| | | | | |||||||| | ||||| |||||||
Sbjct 8078 GCCAAGTTGCAGACAGCAACCTCGTCGGGGGCAGTGTACTCGACAATCTCACAGCACAGG 8019
Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTG 213614
||| || || ||||| |||||||||| ||||| ||| |||| || ||||||
Sbjct 8018 TTGGAGCTGCGAATGGTACCCAGGTTCTTTTGGTTGCTCTTGCGGTTGCAAGCGTCCTTG 7959
Query 213615 TAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTAC 213674
||||||||| ||||| |||||||| ||| | | ||| || | ||| || | |
Sbjct 7958 TAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCCAAAATGGCGTACCACAGCTTC 7899
Query 213675 CTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTC 213733
||| || | || || | ||| | | | ||||||| || || |||||
Sbjct 7898 TGGGCGCGGATA----GTCTCACGACCACGGCCTTCCCTCTCGTACCTCTCATACAGCTC 7843
Query 213734 GTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGA-CAGGATGCGGGACACATGAGGC 213792
| || |||| ||| |||| | | || ||||| | || ||| ||||||||
Sbjct 7842 CTCAAACTCGTCGCCGTAGACATCGGCGAGACCCGGGGCCTCGTGAGGG-CACATGAGAG 7784
Query 213793 TCCAGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTG 213851
|||| || |||| | ||| ||| | || ||||||||| || || |||||||| ||| |
Sbjct 7783 TCCAATCGCCGTTTTGCTC-GACACGCTTCATGAACAGATCAGGAACCCACAGGGCGTAG 7725
Query 213852 AACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCA 213911
|||| ||| | | | ||| ||| ||| ||| ||||| || || || |||
Sbjct 7724 AACAAGTCGCGTGCGCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAAGGGG 7665
Query 213912 AAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCG 213968
|||| ||| |||||||| ||||||| |||||||||||| || || | || | |||||
Sbjct 7664 AAGACGTCGGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGGCGCTTGTTGCCA 7605
Query 213969 CCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG 214028
|||||||| || | || ||||| ||| || || | ||| | ||| ||||||
Sbjct 7604 CCCTGGTCAACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATGGGAATCAGGCCGTTG 7545
Query 214029 GACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA---- 214084
|| |||||||| || || || || ||||| | | | || ||| ||||
Sbjct 7544 GAGGTGCCGTTGGTACCAGCAATGTAGGAGCCAGTTGAAC---GGATGC-GGTGGACGTT 7489
Query 214085 GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGAT 214144
||| || || |||||||| |||||| |||||||| || | | | || || |||
Sbjct 7488 GAGACCGATTCCACCGGCCGTCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTAGAT 7429
Query 214145 GCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGA 214204
||| | |||||||| || | | || | ||||||||| | ||||||||| |||
Sbjct 7428 GCCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGGG 7369
Query 214205 CGAGCCAGAGTTGAAAAGCGTGGG 214228
| |||| |||||| | |||||
Sbjct 7368 GGTACCAGCGTTGAACAAGGTGGG 7345
>seq1666
Length=59928
Score = 233 bits (258), Expect = 4e-56
Identities = 366/516 (71%), Gaps = 11/516 (2%)
Strand=Plus/Plus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
|| ||||| || || | ||||| |||||||| ||||| || | | ||| |||||||||
Sbjct 55203 TGATAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTTGAGCGAAATGTTCTCC 55262
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGCA 47957
|||||| ||||||||||| | ||| || | | ||| ||| | | ||||||
Sbjct 55263 ATGAAGTCGAAGGGGTTGGTAGAGTTGTAGTGCTTCTTGTT--GCCAAGCGCCACCAGCA 55320
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
|| | || || || |||| ||||| | |||||||| ||||||||| | || |
Sbjct 55321 GGCGGTCAGCAACAAACTCAATGTACTGGCACATGAGGCCAGCGTTCATGCCGAGCAGAG 55380
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||||| | ||| | || || ||||| | ||| |||| ||||| || | | ||||
Sbjct 55381 CAACGGGGAGAGCGTCAGTCAGGAACTCTTGCTCAATCTCGACGGCCTCGACAATGATCT 55440
Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCT-TGGCATA-GAGCATGCAGGC 48135
|| ||| | ||| | |||| | | || | || | || | | ||||| ||||||
Sbjct 55441 TCTCAACA---GCCTCGG-GGGTCGGCTTCG-ACTTGATGTGAGAGAAGAGCAGGCAGGC 55495
Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195
|||||| |||||| ||| ||||| || ||||||| |||||||||| ||||||||
Sbjct 55496 AAAGTCGGTGTGCATGCCCTCGTCGCGAGAGATGAGCTCGTTGGAGAATGTCAGACCAGG 55555
Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255
||| | || | || ||||||||||| || | |||||| ||||| ||||||||| ||
Sbjct 55556 CATCAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAGCCGCTGAAGAAGATACC 55615
Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315
||| || || || || ||| |||| | | | | || | | ||||||||| |||||||
Sbjct 55616 CTCGACGGCAGCAAAGGCGATGAGACGCGATGCAAAGGTCGAGTTCTTGTCGCAGATCCA 55675
Query 48316 GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
| || |||||||| ||||||||||||||||| ||
Sbjct 55676 GCGCAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGG 55711
Score = 89.7 bits (98), Expect = 1e-12
Identities = 171/250 (68%), Gaps = 3/250 (1%)
Strand=Plus/Plus
Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488
|||| ||||| | ||||| || |||||||| ||||||||| | ||||| |
Sbjct 55838 TCTCCGAGTGGATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGAA 55897
Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
||||||||| | | ||| | ||| | || ||||| ||||| || ||||| || || |
Sbjct 55898 TCTGCACTTCGGAGCTGAAGCGCTCGACCAAGTTCTCGTTGACAATGCCATCAGACGCGG 55957
Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA-GC--ATTCC 48605
|||||||||| || || || | ||| |||||||| || | | ||| || ||||
Sbjct 55958 CAAAGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTCAGACGCTTGTTCC 56017
Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665
|| | || | || ||| ||| || | || || | |||||||| || || || |
Sbjct 56018 AGTCGTGGAGATCCTTGGACAGATCAATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCT 56077
Query 48666 TTTTGTACAT 48675
| ||||||||
Sbjct 56078 TCTTGTACAT 56087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931465869368320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |