Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq5249 288 2e-72 seq1666 233 4e-56 >seq5249 Length=10599 Score = 288 bits (318), Expect = 2e-72 Identities = 1095/1704 (64%), Gaps = 81/1704 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || ||| ||||||| ||||| || ||||||||||| ||||| Sbjct 8995 ACGGTGAACTGAATGGGGGCAGATGCAGCCTGAGTGCGCAGGTAGTACATGCCCGTCTTC 8936 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669 || || ||| |||||| | |||||| | |||| || || | || | | Sbjct 8935 AGACCAAGCTT---CCAGCCAGCAAAGTGCATGGAAGTGATCTTGCCCATCGTAGGCTCC 8879 Query 212670 TGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCC 212729 | |||| |||| | ||| || || ||| |||||| || || | | Sbjct 8878 T--TCAT----GTGG---------ATGTTGAGCGATTGAGACTGGTCGATAAAGGCACCA 8834 Query 212730 CTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT 212789 | ||| || ||||| | | ||| | | ||| || | ||||||||| |||||| ||| Sbjct 8833 CGGTCGGCAGCCATCTGGACGATGTTGCGCTGAGAAATCTCCCACACAGTCTTGTAGAGG 8774 Query 212790 TCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC 212849 | |||| ||| || |||| | ||| || | || | ||| || || | | | Sbjct 8773 GCCTTGATGTCGTCGGGGATGTTGGGAATTTGTTGAATAGAGCCATTGGACGCGATGA-- 8716 Query 212850 TGCAGGCG--CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAG 212907 ||| | ||||| || ||| || ||| || | ||| ||| | || | Sbjct 8715 TGCGGTTCTTCATGTTGTCCGACCACAGACCCATGTCGACAAGGTCCTTAAGCAACCATG 8656 Query 212908 GGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGG 212967 ||||||| | ||||| ||||| | |||||| | | | ||||| ||| || ||||||| Sbjct 8655 GGTTGACAACTTGGAACTCACCAGCGAGCACACGACGCGAGTAAATGTTGGAGGTGTAGG 8596 Query 212968 GCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCA 213027 |||| | | ||||||| || || || || ||| ||| || ||||||||||| | Sbjct 8595 GCTCAAAACACTCGTTGAAGCCAAGGATTTGGCTAGTCGAGGCAGTAGGCATGGGAGCAA 8536 Query 213028 CCAGGAGACTGTTCCTCACTCCGTG---------CTCGCCGATGAGGCGCCGAAGCTCTG 213078 | || | ||||| | ||| ||||| |||||| |||| ||| || Sbjct 8535 CAAGCAAGCTGTTGCGCACGCCGTGTAGAGCAATCTCGCCCTTGAG-------AGC-CT- 8485 Query 213079 CCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGA 213138 |||||||||| ||||| | | || |||||||||||| | ||||||| Sbjct 8484 CCCAGTCCCAG---------AGGTCTGTGGGCGTCTTGTTCCACATGTCGTATTGCAAGA 8434 Query 213139 TGCCTTTGCTCACGGGGCTGC----CCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCC 213194 |||| || | || | || | | ||| || ||||| | |||| || ||| ||| Sbjct 8433 TGCC----CTGAGAGGCCGGCGAACCTTCGTACGACGAGTAAGCTCCATCCTTCTTAGCC 8378 Query 213195 AGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGC 213254 ||||| || || ||||||| ||| ||||||||| || || |||| |||| ||| Sbjct 8377 AGCTCAATCGAGGCAGTCAGGGCACCGT-GTAGATGGTCTCGAAAATCTGAATGTTAAGC 8319 Query 213255 TTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCC 213314 | | ||||||| || || ||| | ||| | | |||| |||| || || || Sbjct 8318 TGCCTGGCCTCGGGAGAGTCGAAAGCCATGCGGAGGGCGAGGAAAGCATCGGCAAGGCCG 8259 Query 213315 TGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGG 213374 | ||| |||| | || || | ||| | || ||| ||| | ||| | |||| Sbjct 8258 TTGACACCGACAGCAATCGGGCGGTGGCGCATGTTGCTCTTCCTGGCCTCGGGAACGGGG 8199 Query 213375 TAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCC 213434 || ||| ||||||||||||||| ||||| | || | |||||| | | | Sbjct 8198 TAGTGATTGATGTCGATGATCTTGTTCAGGTTCTTGACAAGGACCTGGGTGACCTCGTGC 8139 Query 213435 AGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTG 213494 || | || | ||| | || | || | | ||||| || ||||| | | | Sbjct 8138 AGCTTCTTGAAGTTGTAGACACCATTCTCGACATCGACAAAGGTGGGAAGGGCCAGGGAG 8079 Query 213495 GCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554 |||| |||||| || || ||||| | | | | |||||||| | ||||| ||||||| Sbjct 8078 GCCAAGTTGCAGACAGCAACCTCGTCGGGGGCAGTGTACTCGACAATCTCACAGCACAGG 8019 Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTG 213614 ||| || || ||||| |||||||||| ||||| ||| |||| || |||||| Sbjct 8018 TTGGAGCTGCGAATGGTACCCAGGTTCTTTTGGTTGCTCTTGCGGTTGCAAGCGTCCTTG 7959 Query 213615 TAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTAC 213674 ||||||||| ||||| |||||||| ||| | | ||| || | ||| || | | Sbjct 7958 TAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCCAAAATGGCGTACCACAGCTTC 7899 Query 213675 CTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTC 213733 ||| || | || || | ||| | | | ||||||| || || ||||| Sbjct 7898 TGGGCGCGGATA----GTCTCACGACCACGGCCTTCCCTCTCGTACCTCTCATACAGCTC 7843 Query 213734 GTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGA-CAGGATGCGGGACACATGAGGC 213792 | || |||| ||| |||| | | || ||||| | || ||| |||||||| Sbjct 7842 CTCAAACTCGTCGCCGTAGACATCGGCGAGACCCGGGGCCTCGTGAGGG-CACATGAGAG 7784 Query 213793 TCCAGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTG 213851 |||| || |||| | ||| ||| | || ||||||||| || || |||||||| ||| | Sbjct 7783 TCCAATCGCCGTTTTGCTC-GACACGCTTCATGAACAGATCAGGAACCCACAGGGCGTAG 7725 Query 213852 AACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCA 213911 |||| ||| | | | ||| ||| ||| ||| ||||| || || || ||| Sbjct 7724 AACAAGTCGCGTGCGCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAAGGGG 7665 Query 213912 AAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCG 213968 |||| ||| |||||||| ||||||| |||||||||||| || || | || | ||||| Sbjct 7664 AAGACGTCGGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGGCGCTTGTTGCCA 7605 Query 213969 CCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG 214028 |||||||| || | || ||||| ||| || || | ||| | ||| |||||| Sbjct 7604 CCCTGGTCAACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATGGGAATCAGGCCGTTG 7545 Query 214029 GACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA---- 214084 || |||||||| || || || || ||||| | | | || ||| |||| Sbjct 7544 GAGGTGCCGTTGGTACCAGCAATGTAGGAGCCAGTTGAAC---GGATGC-GGTGGACGTT 7489 Query 214085 GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGAT 214144 ||| || || |||||||| |||||| |||||||| || | | | || || ||| Sbjct 7488 GAGACCGATTCCACCGGCCGTCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTAGAT 7429 Query 214145 GCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGA 214204 ||| | |||||||| || | | || | ||||||||| | ||||||||| ||| Sbjct 7428 GCCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGCTTGGG 7369 Query 214205 CGAGCCAGAGTTGAAAAGCGTGGG 214228 | |||| |||||| | ||||| Sbjct 7368 GGTACCAGCGTTGAACAAGGTGGG 7345 >seq1666 Length=59928 Score = 233 bits (258), Expect = 4e-56 Identities = 366/516 (71%), Gaps = 11/516 (2%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 || ||||| || || | ||||| |||||||| ||||| || | | ||| ||||||||| Sbjct 55203 TGATAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTTGAGCGAAATGTTCTCC 55262 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGCA 47957 |||||| ||||||||||| | ||| || | | ||| ||| | | |||||| Sbjct 55263 ATGAAGTCGAAGGGGTTGGTAGAGTTGTAGTGCTTCTTGTT--GCCAAGCGCCACCAGCA 55320 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || || || |||| ||||| | |||||||| ||||||||| | || | Sbjct 55321 GGCGGTCAGCAACAAACTCAATGTACTGGCACATGAGGCCAGCGTTCATGCCGAGCAGAG 55380 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||||| | ||| | || || ||||| | ||| |||| ||||| || | | |||| Sbjct 55381 CAACGGGGAGAGCGTCAGTCAGGAACTCTTGCTCAATCTCGACGGCCTCGACAATGATCT 55440 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCT-TGGCATA-GAGCATGCAGGC 48135 || ||| | ||| | |||| | | || | || | || | | ||||| |||||| Sbjct 55441 TCTCAACA---GCCTCGG-GGGTCGGCTTCG-ACTTGATGTGAGAGAAGAGCAGGCAGGC 55495 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 |||||| |||||| ||| ||||| || ||||||| |||||||||| |||||||| Sbjct 55496 AAAGTCGGTGTGCATGCCCTCGTCGCGAGAGATGAGCTCGTTGGAGAATGTCAGACCAGG 55555 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||| | || | || ||||||||||| || | |||||| ||||| ||||||||| || Sbjct 55556 CATCAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAGCCGCTGAAGAAGATACC 55615 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315 ||| || || || || ||| |||| | | | | || | | ||||||||| ||||||| Sbjct 55616 CTCGACGGCAGCAAAGGCGATGAGACGCGATGCAAAGGTCGAGTTCTTGTCGCAGATCCA 55675 Query 48316 GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 | || |||||||| ||||||||||||||||| || Sbjct 55676 GCGCAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGG 55711 Score = 89.7 bits (98), Expect = 1e-12 Identities = 171/250 (68%), Gaps = 3/250 (1%) Strand=Plus/Plus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || |||||||| ||||||||| | ||||| | Sbjct 55838 TCTCCGAGTGGATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGAA 55897 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||||||||| | | ||| | ||| | || ||||| ||||| || ||||| || || | Sbjct 55898 TCTGCACTTCGGAGCTGAAGCGCTCGACCAAGTTCTCGTTGACAATGCCATCAGACGCGG 55957 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA-GC--ATTCC 48605 |||||||||| || || || | ||| |||||||| || | | ||| || |||| Sbjct 55958 CAAAGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTCAGACGCTTGTTCC 56017 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | || ||| ||| || | || || | |||||||| || || || | Sbjct 56018 AGTCGTGGAGATCCTTGGACAGATCAATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCT 56077 Query 48666 TTTTGTACAT 48675 | |||||||| Sbjct 56078 TCTTGTACAT 56087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931465869368320