Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 217 3e-51
seq1666 167 4e-36
>seq5249
Length=10599
Score = 217 bits (240), Expect = 3e-51
Identities = 942/1465 (64%), Gaps = 61/1465 (4%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476
||||||||| |||| ||||||||||| || ||| |||| || | |||||||||||
Sbjct 8362 GTCAGGGCACCGTG-TAGATGGTCTCGAAAATCTGAATGTTAAGCTGCCTGGCCTCGGGA 8304
Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536
|| ||| | ||| || || | || | ||||| || || | || |||| | |
Sbjct 8303 GAGTCGAAAGCCATGCGGAGGGCGAGGAAAGCATCGGCAAGGCCGTTGACACCGACAGCA 8244
Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCC--GCTTCTGGCACGGGATAAAAGTTGACGT 221594
|| || | ||| | | ||||| | || || || || ||||| || |||| ||
Sbjct 8243 ATCGGGCGGTGGCGCATGTTGCT--CTTCCTGGCCTCGGGAACGGGGTAGTGATTGATGT 8186
Query 221595 CGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGAT 221654
|||| | ||||| |||||| | ||| | |||||| |||||||| | |
Sbjct 8185 CGATGATCTTGTTCAGGTTCTTGACAAGGACCTGGGTGACCTCGTGCAGCTTCTTGAAGT 8126
Query 221655 TGAACAC-CAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713
|| | || | | || | | | ||| ||||| | | ||||| | | |
Sbjct 8125 TGTAGACACCATTCTC-GACATCG------------ACAAAGGTGGGAAGGGCCAGGGAG 8079
Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773
|||| ||| || || || |||||||| | || |||| | ||||| || |||
Sbjct 8078 GCCAAGTTGCAGACAGCAACCTCGTCGGGGGCAGTGTACTCGACAATCTCACAGCACAGG 8019
Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833
||| || ||||| ||||||| || || || |||||| ||| ||||||||||
Sbjct 8018 TTGGAGCTGCGAATGGTACCCAGGTTCTTTTGGTTGCTCTTGCGGTTGCAAGCGTCCTTG 7959
Query 221834 TAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG-TTC 221892
|||||||| ||||| ||| ||||| ||||||| ||| ||| || ||| || |||
Sbjct 7958 TAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCCAAAATGGCGTACCACAGCTTC 7899
Query 221893 TCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCAT 221952
| ||||| | || ||| ||| ||| | | | || |||| ||| |||
Sbjct 7898 T-GGGCGCGGATAGT-CTCACGAC--CACGGCCTTCCCTCTCGTACCTCTCATACAGCTC 7843
Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCG-GGACACATCAGAC 222011
||||||| || ||||| | ||| | || || || ||| | | || ||||| |||
Sbjct 7842 CTCAAACTCGTCGCCGTAGACATCGGCGAGACCCGG-GGCCTCGTGAGGGCACATGAGAG 7784
Query 222012 TCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAA 222071
|||| | ||| | | ||| | || |||||| || || || | |||||| || | |
Sbjct 7783 TCCAATCGCCGTTTTGCTCGACACGCTTCATGAACAGATCAGGAACCCACAGGGCGTAGA 7724
Query 222072 AGAGATCTCTGGTCCGCTG--CTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTC 222129
| | || | || ||| | ||| ||| |||| ||| || | || || | ||
Sbjct 7723 ACAAGTCGC--GTGCGCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAAGGG 7666
Query 222130 AAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCC 222189
|| | ||| |||||||| |||||||| |||| ||| | ||| || || |||||||||||
Sbjct 7665 GAAGACGTCGGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGGCGCTTGTTGCC 7606
Query 222190 ACCCTGATCCACCATCCTCTCCAGAG----CGTTGAAGATGCGAAGGGTCGGTACCAGTC 222245
|||||| | || | | | || | |||| ||| || || | || | ||| |
Sbjct 7605 ACCCTGGT----CAACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATGGGAATCAGGC 7550
Query 222246 CGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG 222305
||||||| |||||||| || |||||| | ||| | || | | || |
Sbjct 7549 CGTTGGAGGTGCCGTTGGTACCAGCAATGTAGG---AGCCAGTTGAACGGATGC-GGTGG 7494
Query 222306 AC----ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361
|| | ||||| |||||||| || || |||||||| || ||||||| |||||
Sbjct 7493 ACGTTGAGACCGATTCCACCGGCCGTCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCG 7434
Query 222362 ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGAT 222421
||||||||| || ||||||||| | || | || || || || | | ||| |
Sbjct 7433 TAGATGCCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGGC 7374
Query 222422 TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATC 222481
|||| || || ||||| |||| |||||| ||||| |||||||| |||||||
Sbjct 7373 TTGGGGGTACCAGCGTTGAACAAGGTGGGAGAAGCGTGGGTAAAGTACTTTTGAGACATC 7314
Query 222482 AGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTC 222541
| | |||||| || | | | | | ||||| || ||||| || | ||| | |
Sbjct 7313 AAGTTGTACGTTTCAATGGCCTTTTCAATGTTCTCGCCGTGGATTCCAACAGCGACACGC 7254
Query 222542 ATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGA--GCTGGAGAGCAGGTACGATT 222599
|| ||||| ||| || || || || ||| | | | || ||||| ||| ||
Sbjct 7253 ATAATCATGTGCTGTGGTCTTTCGGCA--ACCTTGCCATCGATGCGGAGCAAGTATGACC 7196
Query 222600 TTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGG 222659
| || || |||||||| |||||||| | | || ||||| | | ||| || | ||| |
Sbjct 7195 TCTCGAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCG 7136
Query 222660 CGTCCAGCTC--CGACTTGTGCTTTACGCTCAACTCGAAAAAGCGCT---CAGACACGAG 222714
|| ||||| || | |||||| | | | | ||| | | || || || | |
Sbjct 7135 AGTTGAGCTCATCGGC--GTGCTTCATGATAATATCGTACGTTCCCTTGCCAATCATG-G 7079
Query 222715 GGGAGCGTTCTCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGA 222774
| ||| || | ||| | | |||||| | || |||||| || | | | ||| | ||
Sbjct 7078 GCGAGTGT--ACCTTGTTCTTGGGGTTTATGTAGTGGTAGAGATCCGAGATGACGAGCGA 7021
Query 222775 GAACGTGTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACC 222834
|||| | ||||||||||| ||||| || ||||| || || | ||||| ||| |
Sbjct 7020 AAACGGCTTCTTGGTCTGCTTGTGGAGATTTGAGACGGCAATGCG-GGCGCCAGGATGGC 6962
Query 222835 ATAGTCAGGGTGCACGGTGGTCATG 222859
||||| ||||| |||||||||
Sbjct 6961 GTAGTCGGGGTGGGTAGTGGTCATG 6937
>seq1666
Length=59928
Score = 167 bits (184), Expect = 4e-36
Identities = 342/514 (67%), Gaps = 5/514 (1%)
Strand=Plus/Minus
Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869
||| ||||||||| |||||| ||||| || |||||| | | ||| | | ||
Sbjct 55711 CCCTGCATCAAGAAGAAGGCCGACTGGGCTCTGCGCTGGATCTGCGACAAGAACTCGACC 55652
Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929
|||| ||| || | ||||||||||| || ||||| ||||| |||||||| || ||
Sbjct 55651 TTTGCATCGCGTCTCATCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTC 55592
Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAG 25989
||| ||||||||||||||||| || || ||||| || ||| || |||||||||
Sbjct 55591 GCGTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCTGGTCTGACATTCTCCAACGAG 55532
Query 25990 CTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCAC 26049
|||||| | |||||||| | |||| || |||||||||||||||| | | |||
Sbjct 55531 CTCATCTCTCGCGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTCTTCTC---TCAC 55475
Query 26050 TTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATC 26109
| || || | | ||| | || | | ||||| ||||| || |||||
Sbjct 55474 ATCAAGTCGAAGCCGACCCCCGAGGCTGTTGAGAAGATCATTGTCGAGGCCGTCGAGATT 55415
Query 26110 GAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTC 26169
||| | ||||| | | ||||||||| | |||
Sbjct 55414 GAGCAAGAGTTCCTGACTGACGCTCTCCCCGTTGCTCTGCTCGGCATGAACGCTGGCCTC 55355
Query 26170 ATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAG 26228
||| |||| |||||||||| ||| || |||| ||||| ||| | ||| || | |
Sbjct 55354 ATGTGCCAGTACATTGAGTTTGTTGCTGACCGCCTGCTGGTGGC-GCTTGGCAACAAGAA 55296
Query 26229 ACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGAC 26288
| ||||| | | ||||| |||||||| ||||| ||||| ||| | | || |||||
Sbjct 55295 GCACTACAACTCTACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGAC 55236
Query 26289 CAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322
||||||||| || ||| | || || |||||||||
Sbjct 55235 CAACTTCTTCGAGAAGCGCGTTGGTGACTATCAA 55202
Score = 116 bits (128), Expect = 7e-21
Identities = 169/234 (72%), Gaps = 5/234 (2%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | ||| |||||||||||| ||||||||||||
Sbjct 56096 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGATTGATCTG 56037
Query 25537 GCCAAGGACATGGACGGCTGGTAC--GC-TCTATCCAAAGACGAGCAGCATTTTC-TCAA 25592
||||||| | ||| |||| || || ||| | | ||||||| || | ||| ||
Sbjct 56036 TCCAAGGATCTCCACGACTGGAACAAGCGTCTGAACGACGACGAGC-GCTTCTTCATCTC 55978
Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652
|||| | || |||||||| || |||||||| || || |||||||| || |||| |
Sbjct 55977 CCACGTTCTCGCCTTCTTTGCCGCGTCTGATGGCATTGTCAACGAGAACTTGGTCGAGCG 55918
Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|||| | ||||||||| ||||| || |||||||||||||||||
Sbjct 55917 CTTCAGCTCCGAAGTGCAGATTCCCGAGGCTCGCTGCTTCTACGGTTTCCAGAT 55864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928778062501120
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