Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 136 5e-27
>seq5249
Length=10599
Score = 136 bits (150), Expect = 5e-27
Identities = 604/947 (64%), Gaps = 11/947 (1%)
Strand=Plus/Plus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205
|||||||| |||| || || |||| | || | | || ||||||||| |
Sbjct 7171 TACTTTGGCTTCAAGACGCTCGAGAGGTCATACTTGCTCCGCATCGATGGCAAGGTTGCC 7230
Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265
|||| |||||| ||||| | ||||| ||||| | || |||||||| || |||||||
Sbjct 7231 GAAAGACCACAGCACATGATTATGCGTGTCGCTGTTGGAATCCACGGCGAGAACATTGAA 7290
Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAAC 75324
| | | || || ||| || |||||| ||| ||| || | ||||| | || ||
Sbjct 7291 AAGGCCATTGAAACGTACAACTTGATGTCTCAAAAGTACTTT-ACCCACGCTTCTCCCAC 7349
Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384
| | ||||| |||||||| || | || ||| | | |||||| | |||| || ||
Sbjct 7350 CTTGTTCAACGCTGGTACCCCCAAGCCCCAGCTTGCATCATGCTTCTTGATCGACATGAA 7409
Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444
||||||| ||| | || ||||| | || || | | ||||| || || |||
Sbjct 7410 GGAGGACAGCATCGAGGGCATCTACGACACCCTCAAGACTTGTGCCATGATTTCCAAGAC 7469
Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504
||| || || || || | || |||| | | | | | || ||| ||
Sbjct 7470 GGCCGGTGGAATCGGTCTCAACGTCCACCGCATCCGTTCAACTGGCTCCTACATTGCTGG 7529
Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564
|| || || || | || | ||||| ||||| || || | ||| ||| || ||
Sbjct 7530 TACCAACGGCACCTCCAACGGCCTGATTCCCATGCTCCGTGTCTACAACAACACCGCTCG 7589
Query 75565 CTATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCAT 75620
||| || | || | | ||| | || || | | || ||||| |||| || |
Sbjct 7590 CTACGTTGACCAGG-GTGGCAACAAGCGCCCTGGTGCTTTTGCCATCTACCTGGAGCCTT 7648
Query 75621 GGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTC 75680
|||| ||||| || | ||||| || | || ||||| || | ||||||| ||
Sbjct 7649 GGCACGCCGACGTCTTCCCCTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGG-TC 7707
Query 75681 GGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739
| | | | || | || | |||||||| |||| || || ||||||||||| || |||
Sbjct 7708 CGCGCACGCGACTTGTTCTACGCCCTGTGGGTTCCTGATCTGTTCATGAAGCGTGTCGAG 7767
Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799
| || | ||| |||| | || || || |||| || |||||| |||| |
Sbjct 7768 CAAAACGGCGATTGGACTCTCATGTGCCCTCACGAGGCCCCGGGTCTCGCCGATGTCTAC 7827
Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT 75859
|| || |||||||| | || || | ||| || ||| || | | || ||||
Sbjct 7828 GGCGACGAGTTTGAGGAGCTGTATGAGAGGTACGAGAGGGAAGGCCGTGGTCGTGAGACT 7887
Query 75860 GTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918
| | ||| | || | | ||| | || ||| | | | ||||| ||||| || | ||
Sbjct 7888 ATCCGCGCC-CAGAAGCTGTGGTACGCCATTTTGGAGGCTCAGACCGAGACCGGCAACCC 7946
Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978
| ||||| |||||||| ||||| ||| ||||| ||||||||||| |||| || ||
Sbjct 7947 CTTCATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAAAAGAACCTGGGTACCAT 8006
Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038
||||| || || ||| || ||| | |||||||| | || ||| |||||
Sbjct 8007 TCGCAGCTCCAACCTGTGCTGTGAGATTGTCGAGTACACTGCCCCCGACGAGGTTGCTGT 8066
Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGA 76085
||||| ||||| || | |||||||| | | |||| ||| ||||
Sbjct 8067 CTGCAACTTGGCCTCCCTGGCCCTTCCCACCTTTGTCGATGTCGAGA 8113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596526736474240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |