Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5249 136 5e-27 >seq5249 Length=10599 Score = 136 bits (150), Expect = 5e-27 Identities = 604/947 (64%), Gaps = 11/947 (1%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 |||||||| |||| || || |||| | || | | || ||||||||| | Sbjct 7171 TACTTTGGCTTCAAGACGCTCGAGAGGTCATACTTGCTCCGCATCGATGGCAAGGTTGCC 7230 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 |||| |||||| ||||| | ||||| ||||| | || |||||||| || ||||||| Sbjct 7231 GAAAGACCACAGCACATGATTATGCGTGTCGCTGTTGGAATCCACGGCGAGAACATTGAA 7290 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAAC 75324 | | | || || ||| || |||||| ||| ||| || | ||||| | || || Sbjct 7291 AAGGCCATTGAAACGTACAACTTGATGTCTCAAAAGTACTTT-ACCCACGCTTCTCCCAC 7349 Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384 | | ||||| |||||||| || | || ||| | | |||||| | |||| || || Sbjct 7350 CTTGTTCAACGCTGGTACCCCCAAGCCCCAGCTTGCATCATGCTTCTTGATCGACATGAA 7409 Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444 ||||||| ||| | || ||||| | || || | | ||||| || || ||| Sbjct 7410 GGAGGACAGCATCGAGGGCATCTACGACACCCTCAAGACTTGTGCCATGATTTCCAAGAC 7469 Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504 ||| || || || || | || |||| | | | | | || ||| || Sbjct 7470 GGCCGGTGGAATCGGTCTCAACGTCCACCGCATCCGTTCAACTGGCTCCTACATTGCTGG 7529 Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564 || || || || | || | ||||| ||||| || || | ||| ||| || || Sbjct 7530 TACCAACGGCACCTCCAACGGCCTGATTCCCATGCTCCGTGTCTACAACAACACCGCTCG 7589 Query 75565 CTATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCAT 75620 ||| || | || | | ||| | || || | | || ||||| |||| || | Sbjct 7590 CTACGTTGACCAGG-GTGGCAACAAGCGCCCTGGTGCTTTTGCCATCTACCTGGAGCCTT 7648 Query 75621 GGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTC 75680 |||| ||||| || | ||||| || | || ||||| || | ||||||| || Sbjct 7649 GGCACGCCGACGTCTTCCCCTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGG-TC 7707 Query 75681 GGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 | | | | || | || | |||||||| |||| || || ||||||||||| || ||| Sbjct 7708 CGCGCACGCGACTTGTTCTACGCCCTGTGGGTTCCTGATCTGTTCATGAAGCGTGTCGAG 7767 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 | || | ||| |||| | || || || |||| || |||||| |||| | Sbjct 7768 CAAAACGGCGATTGGACTCTCATGTGCCCTCACGAGGCCCCGGGTCTCGCCGATGTCTAC 7827 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT 75859 || || |||||||| | || || | ||| || ||| || | | || |||| Sbjct 7828 GGCGACGAGTTTGAGGAGCTGTATGAGAGGTACGAGAGGGAAGGCCGTGGTCGTGAGACT 7887 Query 75860 GTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918 | | ||| | || | | ||| | || ||| | | | ||||| ||||| || | || Sbjct 7888 ATCCGCGCC-CAGAAGCTGTGGTACGCCATTTTGGAGGCTCAGACCGAGACCGGCAACCC 7946 Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978 | ||||| |||||||| ||||| ||| ||||| ||||||||||| |||| || || Sbjct 7947 CTTCATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAAAAGAACCTGGGTACCAT 8006 Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038 ||||| || || ||| || ||| | |||||||| | || ||| ||||| Sbjct 8007 TCGCAGCTCCAACCTGTGCTGTGAGATTGTCGAGTACACTGCCCCCGACGAGGTTGCTGT 8066 Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGA 76085 ||||| ||||| || | |||||||| | | |||| ||| |||| Sbjct 8067 CTGCAACTTGGCCTCCCTGGCCCTTCCCACCTTTGTCGATGTCGAGA 8113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596526736474240