Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq1576 196 6e-45
seq3589 150 2e-31
seq2177 140 4e-28
seq2979 123 3e-23
seq3558 107 3e-18
seq3832 89.7 7e-13
>seq1576
Length=54074
Score = 196 bits (216), Expect = 6e-45
Identities = 390/574 (68%), Gaps = 4/574 (1%)
Strand=Plus/Plus
Query 195414 TTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTA 195473
|| |||| | ||| ||||| | || || | || || || ||| || |||||||||
Sbjct 19552 TTGCAGACACTGAGCGTCTGATCGGTGACTCGGCGAAGAACCAGGTCGCCATGAACCCTC 19611
Query 195474 TCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCC 195533
||| || ||||| ||||| |||||||| || ||||||||||| || | || |
Sbjct 19612 ACAACACCGTCTTCGACGCCAAGCGTCTCATCGGTCGCAAGTTCAACGACGCTGAGGTGC 19671
Query 195534 AAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGA 195593
| | ||| || ||| ||| | | | ||| | || | | |||| ||||| | |
Sbjct 19672 AGGCCGACATGAAGCACTTCCCCT-TCAAGGTCATCGAGAAG--GCTGGCAAGCCCGTCA 19728
Query 195594 TTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGG 195653
| | || || || | || ||| |||| || | || || ||||| || || ||||
Sbjct 19729 TCCAGGTCGAGTTCAAGGGCGAGGAGAAGGTCTTCACGCCAGAGGAAATCTCATCGATGG 19788
Query 195654 TGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAG 195713
| ||| ||||||| ||||||||| || || | | | | | | || || | || |
Sbjct 19789 TCCTGACCAAGATGAGGGAGACTGCCGAGTCGTACCTTGCGGCACC-GTTAACAACGCTG 19847
Query 195714 TTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTG 195773
| || || || ||||| ||||| | || || || || ||||| || ||||| || | |
Sbjct 19848 TCGTCACCGTCCCTGCCTACTTTAACGACTCCCAGCGCCAGGCCACCAAGGATGCCGGTC 19907
Query 195774 CTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTT 195833
|| || ||||| ||| || | |||||||| || || || |||||||| ||||| |
Sbjct 19908 TGATCGCTGGTCTCAACGTCCTCCGCATTATCAACGAGCCCACCGCGGCTGCCATTGCCT 19967
Query 195834 ATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTG 195893
| ||||| |||||||| | | || || || | ||||| || | |||||||
Sbjct 19968 ACGGTCTTGACAAGAAGACCACTGGCGAGCGCAACGTCCTCATCTTCGACTTGGGTGGTG 20027
Query 195894 GTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTG 195953
|||| || |||||||| ||||| | ||||| | || || |||||||| ||| | ||||
Sbjct 20028 GTACTTTCGATGTCTCCCTTCTGACCATTGAGGAGGGCATCTTCGAAGTCAAGTCCACTG 20087
Query 195954 CTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
| ||||| ||||| || ||||| || || |||||
Sbjct 20088 CCGGTGACACTCACCTTGGTGGCGAGGACTTCGA 20121
>seq3589
Length=6346
Score = 150 bits (166), Expect = 2e-31
Identities = 173/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| ||||| || || || | || || || || || || || || || ||||
Sbjct 3443 GTGGTATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATTACGCTTGAAGTCGAGT 3384
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
|||||||||| || || ||| |||| | ||||| ||||| ||||| || || || ||||
Sbjct 3383 CGTCAGACACGATTGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGTATCCCGCCCG 3324
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
||||||| || || |||||||| || || ||||| || || || | || | || || |
Sbjct 3323 ATCAGCAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGACGGCAGAACGTTGGCAGACT 3264
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| | ||||||||||| || || ||| | || || | || || ||||||
Sbjct 3263 ACAACATCCAAAAGGAGTCAACCCTGCACTTGGTGCTTCGTCTCCGTGGTGGT 3211
Score = 138 bits (152), Expect = 1e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
||||| || || ||||||||||| || || ||||| ||||| ||||| || |||| ||
Sbjct 3642 ACTGGCAAGACCATCACCCTCGAAGTCGAATCGTCCGACACCATCGACAATGTCAAGTCC 3583
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
|||||||| |||||||| ||||| || || || ||||| || | || || || || ||
Sbjct 3582 AAGATTCAGGATAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTCGCCGGCAAG 3523
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
|| || || || || || ||||| || || |||||| |||| ||||| || || || |||
Sbjct 3522 CAACTCGAGGACGGTCGCACCCTTGCCGACTACAACATTCAGAAGGAATCCACCCTCCAC 3463
Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089
| || || | || || ||||||
Sbjct 3462 TTGGTGCTCCGTCTCCGCGGTGGT 3439
>seq2177
Length=34801
Score = 140 bits (154), Expect = 4e-28
Identities = 140/182 (77%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929
||| || || ||||| || || || || |||||||||||||||||||| || ||||| ||
Sbjct 6023 CTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCAT 6082
Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989
||| || |||| ||||||| || || ||||| |||||||| || || ||||| || ||
Sbjct 6083 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCT 6142
Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049
|| || || || || ||||| || || || || |||||| | || |||||| | || ||
Sbjct 6143 GATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAA 6202
Query 172050 GG 172051
||
Sbjct 6203 GG 6204
>seq2979
Length=7824
Score = 123 bits (136), Expect = 3e-23
Identities = 224/328 (68%), Gaps = 10/328 (3%)
Strand=Plus/Minus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
|||||||||||||| || || | ||| ||||||| | || || | || || || |||
Sbjct 3631 AAGATGAAGGAGACCGCCGAGGCCTTCTTGGGTAAGAACGTCAAGAACGCCGTCGTCACT 3572
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| || || ||||||| || || || || ||||| || |||||||||| | |||||
Sbjct 3571 GTCCCCGCCTACTTCAACGACTCTCAGCGCCAGGCCACCAAGGACGCTGGTCAGATTGCC 3512
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
||||| ||| || | | |||| || || || || || || |||| || |||||
Sbjct 3511 GGTCTTAACGTCCTCCGTGTCGTCAACGAGCCTACTGCCGCCGCTCTTGCCTACGGTCTT 3452
Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTG--ATCTTTGATCTCGGTGGTGGTACGT 195899
|| ||| | ||| |||| |||| ||| ||||| ||||||||||| |
Sbjct 3451 GAGAAGGAGCAGG--------AAAAGACCATTGCCGTCTACGATCTTGGTGGTGGTACTT 3400
Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959
| ||| |||| ||||| | ||| | ||| | ||||| || ||| | || ||||
Sbjct 3399 TCGATATCTCCATTCTCGAGATTCAGAACGGTGTCTTCGAGGTCAAGTCCACCAACGGTG 3340
Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGA 195987
| || || || |||||||| || || ||
Sbjct 3339 ACACCCACCTTGGTGGTGAGGACTTTGA 3312
>seq3558
Length=19792
Score = 107 bits (118), Expect = 3e-18
Identities = 262/393 (67%), Gaps = 8/393 (2%)
Strand=Plus/Plus
Query 196043 ATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGA 196102
|| ||||| || | | || || || || || |||||||| || || |||||||| ||
Sbjct 1159 ATCTCTGGCGATGCCCGTGCCCTCCGCCGTCTCAGGACTGCTTGCGAGCGTGCCAAGCGT 1218
Query 196103 ACTCTCTCTTCTACGGCTC--AAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTG 196160
||||| || | ||| | | | || | || ||||| || || | || ||||| |
Sbjct 1219 ACTCTTTC--CAACGCCACCCAGACCACCGTCGAGATCGACTCCCTCTTCGACGGCGAGG 1276
Query 196161 ACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA--G 196218
||||| | | | || |||||||| ||||| || ||| | ||| | | || | |
Sbjct 1277 ACTTCAACTCGAACATCACCCGTGCCCGTTTCGAGGAGCTCAACCAGAAGTCCTTCACCG 1336
Query 196219 GAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGT 196278
| | | || | ||||| || || || || || || || || ||||| |||||
Sbjct 1337 GCACT--ATCGCCCCTGTCGAGCAGGTCCTGAAGGATGCTGCCATTGACAAGTCCAAGGT 1394
Query 196279 TGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTC 196338
|||||| |||||||| || || || || |||||||| || ||||| || || | ||
Sbjct 1395 TGATGAGATTGTCCTGGTCGGTGGTTCCACCCGTATCCCCAAGATCCAGAAGCTCCTCAG 1454
Query 196339 TAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTA 196398
||||||||| || | | | || | |||||||| || || || ||||| ||
Sbjct 1455 CGACTTCTTCAACGGCAAGAAGCTTGAGAAGAGCATCAACCCCGACGAGGCCGTTGCCTA 1514
Query 196399 TGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431
||||| || || ||||| | ||| ||||| ||
Sbjct 1515 CGGTGCCGCTGTCCAGGCCGGTATCCTCTCCGG 1547
Score = 89.7 bits (98), Expect = 7e-13
Identities = 176/260 (68%), Gaps = 3/260 (1%)
Strand=Plus/Plus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
|| || || || ||||||| || || || || || || |||||||||| ||| |||
Sbjct 702 ACCGTTCCGGCCTACTTCAACGACAACCAGCGTCAAGCTACCAAGGACGCTGGTGCCATT 761
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
| || || ||| || | || ||||| || || || || || || || || || |||
Sbjct 762 TCCGGCCTGAACGTCCTCCGCATCATCAACGAGCCTACCGCTGCCGCCATCGCCTACGGT 821
Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895
|| | | |||| || | || | || || |||||| || || |||||||||
Sbjct 822 CTCGGCTCCGGCAAGTCTGAGAAGGAGAGGAACGTTCTGATCTACGACCTTGGTGGTGGT 881
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
|| || ||||| || || ||| | || | || ||| | ||| || ||| | || |||
Sbjct 882 ACCTTCGATGTGTCCCTCCTCCACATCCAGGGCGGTGTTTTCACTGTCAAGTCCACCGCT 941
Query 195956 GGTGATACTCATCTAGGTGG 195975
||||| ||||| || |||||
Sbjct 942 GGTGACACTCACCTTGGTGG 961
>seq3832
Length=44359
Score = 89.7 bits (98), Expect = 7e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 198558 GGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCG 198617
|||| ||| |||| ||| |||| ||||||||||||||||| || ||||| ||| | ||
Sbjct 42982 GGTGTTCTCCTCGTCGGACCCCCCGGTACTGGTAAAACCCTCCTCGCTCGCGCTGTTGCT 43041
Query 198618 GGTGAATCGAGTGTCCCCTTTCTTCAGTGCTCCGCGGCGAGTTTCATCGAGATGTTCGTT 198677
|| || | | ||||| ||| | || || | || ||| ||| || | |||
Sbjct 43042 GGAGAGGCAGGCGTCCCATTTTTCCAAATGTCGGGCGCTGAATTCGACGAAATCTATGTT 43101
Query 198678 GGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAG-CACGTGAAAATCAACCATG 198736
|| ||||| || ||||| ||| |||||||||||| || | || || ||| | |||
Sbjct 43102 GGCGTTGGCGCAAAGCGAGTCAGGGAACTCTTTGGCCAGGCCAAGTCAAAGGC-ACCTGC 43160
Query 198737 TATCATCTTCATTGATGAGATTGACGCTGTTGG 198769
||| ||||||| || || |||| || || ||
Sbjct 43161 AATCGTCTTCATCGACGAACTTGATGCCGTAGG 43193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657815132586560
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