Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1576 196 6e-45 seq3589 150 2e-31 seq2177 140 4e-28 seq2979 123 3e-23 seq3558 107 3e-18 seq3832 89.7 7e-13 >seq1576 Length=54074 Score = 196 bits (216), Expect = 6e-45 Identities = 390/574 (68%), Gaps = 4/574 (1%) Strand=Plus/Plus Query 195414 TTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTA 195473 || |||| | ||| ||||| | || || | || || || ||| || ||||||||| Sbjct 19552 TTGCAGACACTGAGCGTCTGATCGGTGACTCGGCGAAGAACCAGGTCGCCATGAACCCTC 19611 Query 195474 TCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCC 195533 ||| || ||||| ||||| |||||||| || ||||||||||| || | || | Sbjct 19612 ACAACACCGTCTTCGACGCCAAGCGTCTCATCGGTCGCAAGTTCAACGACGCTGAGGTGC 19671 Query 195534 AAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGA 195593 | | ||| || ||| ||| | | | ||| | || | | |||| ||||| | | Sbjct 19672 AGGCCGACATGAAGCACTTCCCCT-TCAAGGTCATCGAGAAG--GCTGGCAAGCCCGTCA 19728 Query 195594 TTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGG 195653 | | || || || | || ||| |||| || | || || ||||| || || |||| Sbjct 19729 TCCAGGTCGAGTTCAAGGGCGAGGAGAAGGTCTTCACGCCAGAGGAAATCTCATCGATGG 19788 Query 195654 TGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAG 195713 | ||| ||||||| ||||||||| || || | | | | | | || || | || | Sbjct 19789 TCCTGACCAAGATGAGGGAGACTGCCGAGTCGTACCTTGCGGCACC-GTTAACAACGCTG 19847 Query 195714 TTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTG 195773 | || || || ||||| ||||| | || || || || ||||| || ||||| || | | Sbjct 19848 TCGTCACCGTCCCTGCCTACTTTAACGACTCCCAGCGCCAGGCCACCAAGGATGCCGGTC 19907 Query 195774 CTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTT 195833 || || ||||| ||| || | |||||||| || || || |||||||| ||||| | Sbjct 19908 TGATCGCTGGTCTCAACGTCCTCCGCATTATCAACGAGCCCACCGCGGCTGCCATTGCCT 19967 Query 195834 ATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTG 195893 | ||||| |||||||| | | || || || | ||||| || | ||||||| Sbjct 19968 ACGGTCTTGACAAGAAGACCACTGGCGAGCGCAACGTCCTCATCTTCGACTTGGGTGGTG 20027 Query 195894 GTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTG 195953 |||| || |||||||| ||||| | ||||| | || || |||||||| ||| | |||| Sbjct 20028 GTACTTTCGATGTCTCCCTTCTGACCATTGAGGAGGGCATCTTCGAAGTCAAGTCCACTG 20087 Query 195954 CTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 | ||||| ||||| || ||||| || || ||||| Sbjct 20088 CCGGTGACACTCACCTTGGTGGCGAGGACTTCGA 20121 >seq3589 Length=6346 Score = 150 bits (166), Expect = 2e-31 Identities = 173/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || || | || || || || || || || || || |||| Sbjct 3443 GTGGTATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATTACGCTTGAAGTCGAGT 3384 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 |||||||||| || || ||| |||| | ||||| ||||| ||||| || || || |||| Sbjct 3383 CGTCAGACACGATTGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGTATCCCGCCCG 3324 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 ||||||| || || |||||||| || || ||||| || || || | || | || || | Sbjct 3323 ATCAGCAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGACGGCAGAACGTTGGCAGACT 3264 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | ||||||||||| || || ||| | || || | || || |||||| Sbjct 3263 ACAACATCCAAAAGGAGTCAACCCTGCACTTGGTGCTTCGTCTCCGTGGTGGT 3211 Score = 138 bits (152), Expect = 1e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 ||||| || || ||||||||||| || || ||||| ||||| ||||| || |||| || Sbjct 3642 ACTGGCAAGACCATCACCCTCGAAGTCGAATCGTCCGACACCATCGACAATGTCAAGTCC 3583 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 |||||||| |||||||| ||||| || || || ||||| || | || || || || || Sbjct 3582 AAGATTCAGGATAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTCGCCGGCAAG 3523 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 || || || || || || ||||| || || |||||| |||| ||||| || || || ||| Sbjct 3522 CAACTCGAGGACGGTCGCACCCTTGCCGACTACAACATTCAGAAGGAATCCACCCTCCAC 3463 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 | || || | || || |||||| Sbjct 3462 TTGGTGCTCCGTCTCCGCGGTGGT 3439 >seq2177 Length=34801 Score = 140 bits (154), Expect = 4e-28 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929 ||| || || ||||| || || || || |||||||||||||||||||| || ||||| || Sbjct 6023 CTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCAT 6082 Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| || |||| ||||||| || || ||||| |||||||| || || ||||| || || Sbjct 6083 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCT 6142 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 || || || || || ||||| || || || || |||||| | || |||||| | || || Sbjct 6143 GATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAA 6202 Query 172050 GG 172051 || Sbjct 6203 GG 6204 >seq2979 Length=7824 Score = 123 bits (136), Expect = 3e-23 Identities = 224/328 (68%), Gaps = 10/328 (3%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||||| || || | ||| ||||||| | || || | || || || ||| Sbjct 3631 AAGATGAAGGAGACCGCCGAGGCCTTCTTGGGTAAGAACGTCAAGAACGCCGTCGTCACT 3572 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || || || ||||| || |||||||||| | ||||| Sbjct 3571 GTCCCCGCCTACTTCAACGACTCTCAGCGCCAGGCCACCAAGGACGCTGGTCAGATTGCC 3512 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| || | | |||| || || || || || || |||| || ||||| Sbjct 3511 GGTCTTAACGTCCTCCGTGTCGTCAACGAGCCTACTGCCGCCGCTCTTGCCTACGGTCTT 3452 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTG--ATCTTTGATCTCGGTGGTGGTACGT 195899 || ||| | ||| |||| |||| ||| ||||| ||||||||||| | Sbjct 3451 GAGAAGGAGCAGG--------AAAAGACCATTGCCGTCTACGATCTTGGTGGTGGTACTT 3400 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 | ||| |||| ||||| | ||| | ||| | ||||| || ||| | || |||| Sbjct 3399 TCGATATCTCCATTCTCGAGATTCAGAACGGTGTCTTCGAGGTCAAGTCCACCAACGGTG 3340 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGA 195987 | || || || |||||||| || || || Sbjct 3339 ACACCCACCTTGGTGGTGAGGACTTTGA 3312 >seq3558 Length=19792 Score = 107 bits (118), Expect = 3e-18 Identities = 262/393 (67%), Gaps = 8/393 (2%) Strand=Plus/Plus Query 196043 ATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGA 196102 || ||||| || | | || || || || || |||||||| || || |||||||| || Sbjct 1159 ATCTCTGGCGATGCCCGTGCCCTCCGCCGTCTCAGGACTGCTTGCGAGCGTGCCAAGCGT 1218 Query 196103 ACTCTCTCTTCTACGGCTC--AAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTG 196160 ||||| || | ||| | | | || | || ||||| || || | || ||||| | Sbjct 1219 ACTCTTTC--CAACGCCACCCAGACCACCGTCGAGATCGACTCCCTCTTCGACGGCGAGG 1276 Query 196161 ACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA--G 196218 ||||| | | | || |||||||| ||||| || ||| | ||| | | || | | Sbjct 1277 ACTTCAACTCGAACATCACCCGTGCCCGTTTCGAGGAGCTCAACCAGAAGTCCTTCACCG 1336 Query 196219 GAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGT 196278 | | | || | ||||| || || || || || || || || ||||| ||||| Sbjct 1337 GCACT--ATCGCCCCTGTCGAGCAGGTCCTGAAGGATGCTGCCATTGACAAGTCCAAGGT 1394 Query 196279 TGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTC 196338 |||||| |||||||| || || || || |||||||| || ||||| || || | || Sbjct 1395 TGATGAGATTGTCCTGGTCGGTGGTTCCACCCGTATCCCCAAGATCCAGAAGCTCCTCAG 1454 Query 196339 TAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTA 196398 ||||||||| || | | | || | |||||||| || || || ||||| || Sbjct 1455 CGACTTCTTCAACGGCAAGAAGCTTGAGAAGAGCATCAACCCCGACGAGGCCGTTGCCTA 1514 Query 196399 TGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431 ||||| || || ||||| | ||| ||||| || Sbjct 1515 CGGTGCCGCTGTCCAGGCCGGTATCCTCTCCGG 1547 Score = 89.7 bits (98), Expect = 7e-13 Identities = 176/260 (68%), Gaps = 3/260 (1%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || || ||||||| || || || || || || |||||||||| ||| ||| Sbjct 702 ACCGTTCCGGCCTACTTCAACGACAACCAGCGTCAAGCTACCAAGGACGCTGGTGCCATT 761 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 | || || ||| || | || ||||| || || || || || || || || || ||| Sbjct 762 TCCGGCCTGAACGTCCTCCGCATCATCAACGAGCCTACCGCTGCCGCCATCGCCTACGGT 821 Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | | |||| || | || | || || |||||| || || ||||||||| Sbjct 822 CTCGGCTCCGGCAAGTCTGAGAAGGAGAGGAACGTTCTGATCTACGACCTTGGTGGTGGT 881 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || ||||| || || ||| | || | || ||| | ||| || ||| | || ||| Sbjct 882 ACCTTCGATGTGTCCCTCCTCCACATCCAGGGCGGTGTTTTCACTGTCAAGTCCACCGCT 941 Query 195956 GGTGATACTCATCTAGGTGG 195975 ||||| ||||| || ||||| Sbjct 942 GGTGACACTCACCTTGGTGG 961 >seq3832 Length=44359 Score = 89.7 bits (98), Expect = 7e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 198558 GGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCG 198617 |||| ||| |||| ||| |||| ||||||||||||||||| || ||||| ||| | || Sbjct 42982 GGTGTTCTCCTCGTCGGACCCCCCGGTACTGGTAAAACCCTCCTCGCTCGCGCTGTTGCT 43041 Query 198618 GGTGAATCGAGTGTCCCCTTTCTTCAGTGCTCCGCGGCGAGTTTCATCGAGATGTTCGTT 198677 || || | | ||||| ||| | || || | || ||| ||| || | ||| Sbjct 43042 GGAGAGGCAGGCGTCCCATTTTTCCAAATGTCGGGCGCTGAATTCGACGAAATCTATGTT 43101 Query 198678 GGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAG-CACGTGAAAATCAACCATG 198736 || ||||| || ||||| ||| |||||||||||| || | || || ||| | ||| Sbjct 43102 GGCGTTGGCGCAAAGCGAGTCAGGGAACTCTTTGGCCAGGCCAAGTCAAAGGC-ACCTGC 43160 Query 198737 TATCATCTTCATTGATGAGATTGACGCTGTTGG 198769 ||| ||||||| || || |||| || || || Sbjct 43161 AATCGTCTTCATCGACGAACTTGATGCCGTAGG 43193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657815132586560